RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 FGF8P55075 233 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC4-211ENST00000533012 FAM74A3Q4VXF1 159 aa8.27□□□□□ -1.09
TRAPPC4-211ENST00000533012 OR8A1Q8NGG7 326 aa8.27□□□□□ -1.09
TRAPPC4-211ENST00000533012 OR10J6PQ8NGY7 276 aa8.27□□□□□ -1.09
TRAPPC4-211ENST00000533012 RXFP4Q8TDU9 374 aa8.27□□□□□ -1.09
TRAPPC4-211ENST00000533012 CLUHP3Q96NS8 147 aa8.27□□□□□ -1.09
TRAPPC4-211ENST00000533012 Q9H3A6 140 aa8.27□□□□□ -1.09
TRAPPC4-211ENST00000533012 ZMAT4Q9H898 229 aa8.27□□□□□ -1.09
TRAPPC4-211ENST00000533012 OTORQ9NRC9 128 aa8.27□□□□□ -1.09
TRAPPC4-211ENST00000533012 M0R3E3 92 aa8.26□□□□□ -1.09
TRAPPC4-211ENST00000533012 ZNF705DP0CH99 300 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC4-211ENST00000533012 ZNF705BP0CI00 300 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC4-211ENST00000533012 CNN1P51911 297 aaKnown RBP8.26□□□□□ -1.09
TRAPPC4-211ENST00000533012 HIST1H1AQ02539 215 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC4-211ENST00000533012 C15orf54Q8N8G6 183 aa8.26□□□□□ -1.09
TRAPPC4-211ENST00000533012 CMTM2Q8TAZ6 248 aa8.26□□□□□ -1.09
TRAPPC4-211ENST00000533012 TMPRSS5Q9H3S3 457 aa8.26□□□□□ -1.09
TRAPPC4-211ENST00000533012 PPP1R14DQ9NXH3 145 aa8.26□□□□□ -1.09
TRAPPC4-211ENST00000533012 DNAH9Q9NYC9 4486 aa8.25□□□□□ -1.09
TRAPPC4-211ENST00000533012 A0A1B0GV50 99 aa8.25□□□□□ -1.09
TRAPPC4-211ENST00000533012 PRAC2D3DTV9 90 aa8.25□□□□□ -1.09
TRAPPC4-211ENST00000533012 TMEM250H0YL14 139 aa8.25□□□□□ -1.09
TRAPPC4-211ENST00000533012 CA1P00915 261 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC4-211ENST00000533012 SRP19P09132 144 aaKnown RBP8.25□□□□□ -1.09
TRAPPC4-211ENST00000533012 PRB4P10163 310 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC4-211ENST00000533012 Q6ZWC4 215 aa8.25□□□□□ -1.09
TRAPPC4-211ENST00000533012 SPATA25Q9BR10 227 aa8.25□□□□□ -1.09
TRAPPC4-211ENST00000533012 TM2D3Q9BRN9 247 aa8.25□□□□□ -1.09
TRAPPC4-211ENST00000533012 C1QTNF4Q9BXJ3 329 aa8.25□□□□□ -1.09
TRAPPC4-211ENST00000533012 RPS10P5Q9NQ39 176 aa8.25□□□□□ -1.09
TRAPPC4-211ENST00000533012 ARL2-SNX15V9GYD0 113 aa8.25□□□□□ -1.09
TRAPPC4-211ENST00000533012 A0A087WWC5 75 aa8.24□□□□□ -1.09
TRAPPC4-211ENST00000533012 A0A1W2PRE2 83 aa8.24□□□□□ -1.09
TRAPPC4-211ENST00000533012 PDE6DO43924 150 aa8.24□□□□□ -1.09
TRAPPC4-211ENST00000533012 SUMO1P63165 101 aaKnown RBP8.24□□□□□ -1.09
TRAPPC4-211ENST00000533012 MEF2BQ02080 365 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC4-211ENST00000533012 ARL6IP6Q8N6S5 226 aa8.24□□□□□ -1.09
TRAPPC4-211ENST00000533012 TVP23CQ96ET8 276 aa8.24□□□□□ -1.09
TRAPPC4-211ENST00000533012 LINC00477Q96M19 166 aa8.24□□□□□ -1.09
TRAPPC4-211ENST00000533012 PRKDCP78527 4128 aaKnown RBP8.24□□□□□ -1.09
TRAPPC4-211ENST00000533012 CXorf65A6NEN9 183 aa8.23□□□□□ -1.09
TRAPPC4-211ENST00000533012 F6UZH7 168 aa8.23□□□□□ -1.09
TRAPPC4-211ENST00000533012 SPRY2O43597 315 aa8.23□□□□□ -1.09
TRAPPC4-211ENST00000533012 SLC25A5P05141 298 aaKnown RBP8.23□□□□□ -1.09
TRAPPC4-211ENST00000533012 FXYD7P58549 80 aa8.23□□□□□ -1.09
TRAPPC4-211ENST00000533012 UBE2G2P60604 165 aa8.23□□□□□ -1.09
TRAPPC4-211ENST00000533012 ATRAIDQ6UW56 229 aa8.23□□□□□ -1.09
TRAPPC4-211ENST00000533012 RCHY1Q96PM5 261 aa8.23□□□□□ -1.09
TRAPPC4-211ENST00000533012 RARRES2Q99969 163 aa8.23□□□□□ -1.09
TRAPPC4-211ENST00000533012 TP53TG1Q9Y2A0 90 aa8.23□□□□□ -1.09
TRAPPC4-211ENST00000533012 C7orf77A4D0Y5 90 aa8.22□□□□□ -1.09
TRAPPC4-211ENST00000533012 FAM74A7A6NL05 159 aa8.22□□□□□ -1.09
TRAPPC4-211ENST00000533012 A8MTW9 85 aa8.22□□□□□ -1.09
TRAPPC4-211ENST00000533012 DIRC3C9JPN6 131 aa8.22□□□□□ -1.09
TRAPPC4-211ENST00000533012 NPIPB6E9PJ23 425 aa8.22□□□□□ -1.09
TRAPPC4-211ENST00000533012 AMBPP02760 352 aa8.22□□□□□ -1.09
TRAPPC4-211ENST00000533012 GIG44P09565 113 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC4-211ENST00000533012 CCL20P78556 96 aa8.22□□□□□ -1.09
TRAPPC4-211ENST00000533012 ERCC8Q13216 396 aa8.22□□□□□ -1.09
TRAPPC4-211ENST00000533012 DEFB135Q30KP9 77 aa8.22□□□□□ -1.09
TRAPPC4-211ENST00000533012 TMEM78Q5T7P6 136 aa8.22□□□□□ -1.09
TRAPPC4-211ENST00000533012 CST9LP1Q5W188 147 aa8.22□□□□□ -1.09
TRAPPC4-211ENST00000533012 AMTNQ6UX39 209 aa8.22□□□□□ -1.09
TRAPPC4-211ENST00000533012 C9orf47Q6ZRZ4 202 aa8.22□□□□□ -1.09
TRAPPC4-211ENST00000533012 CYB561D1Q8N8Q1 229 aa8.22□□□□□ -1.09
TRAPPC4-211ENST00000533012 C5orf17Q8NAS9 161 aa8.22□□□□□ -1.09
TRAPPC4-211ENST00000533012 RNF183Q96D59 192 aa8.22□□□□□ -1.09
TRAPPC4-211ENST00000533012 AGPAT4-IT1Q9H0P7 198 aa8.22□□□□□ -1.09
TRAPPC4-211ENST00000533012 XCL2Q9UBD3 114 aa8.22□□□□□ -1.09
TRAPPC4-211ENST00000533012 EPDR1Q9UM22 224 aa8.22□□□□□ -1.09
TRAPPC4-211ENST00000533012 YTHDF2Q9Y5A9 579 aaKnown RBP8.22□□□□□ -1.09
TRAPPC4-211ENST00000533012 IGKV2-40A0A087WW87 121 aaPredicted RBP8.21□□□□□ -1.1
TRAPPC4-211ENST00000533012 RBAKDNA6NC62 111 aa8.21□□□□□ -1.1
TRAPPC4-211ENST00000533012 C9JQL5 133 aa8.21□□□□□ -1.1
TRAPPC4-211ENST00000533012 K7EQM0 130 aa8.21□□□□□ -1.1
TRAPPC4-211ENST00000533012 IGKV2D-40P01614 121 aaPredicted RBP8.21□□□□□ -1.1
TRAPPC4-211ENST00000533012 MT-ND4LP03901 98 aa8.21□□□□□ -1.1
TRAPPC4-211ENST00000533012 CT45A10P0DMU9 189 aa8.21□□□□□ -1.1
TRAPPC4-211ENST00000533012 TSPOP30536 169 aa8.21□□□□□ -1.1
TRAPPC4-211ENST00000533012 CEBPGP53567 150 aa8.21□□□□□ -1.1
TRAPPC4-211ENST00000533012 FLI1Q01543 452 aaPredicted RBP8.21□□□□□ -1.1
TRAPPC4-211ENST00000533012 SPINK13Q1W4C9 94 aa8.21□□□□□ -1.1
TRAPPC4-211ENST00000533012 RNF212Q495C1 297 aa8.21□□□□□ -1.1
TRAPPC4-211ENST00000533012 ODF3Q96PU9 254 aa8.21□□□□□ -1.1
TRAPPC4-211ENST00000533012 VGLL1Q99990 258 aa8.21□□□□□ -1.1
TRAPPC4-211ENST00000533012 OVOL2Q9BRP0 275 aa8.21□□□□□ -1.1
TRAPPC4-211ENST00000533012 CTDSP1Q9GZU7 261 aa8.21□□□□□ -1.1
TRAPPC4-211ENST00000533012 NAT8Q9UHE5 227 aa8.21□□□□□ -1.1
TRAPPC4-211ENST00000533012 RPH3ALQ9UNE2 315 aa8.21□□□□□ -1.1
TRAPPC4-211ENST00000533012 SERTM2A0A1B0GWG4 89 aa8.2□□□□□ -1.1
TRAPPC4-211ENST00000533012 ZNF727A8MUV8 499 aa8.2□□□□□ -1.1
TRAPPC4-211ENST00000533012 GGTLC3B5MD39 225 aa8.2□□□□□ -1.1
TRAPPC4-211ENST00000533012 M0R2Z0 102 aa8.2□□□□□ -1.1
TRAPPC4-211ENST00000533012 PAGE4O60829 102 aa8.2□□□□□ -1.1
TRAPPC4-211ENST00000533012 TCRAP04437 139 aa8.2□□□□□ -1.1
TRAPPC4-211ENST00000533012 LEPP41159 167 aa8.2□□□□□ -1.1
TRAPPC4-211ENST00000533012 CDKN1BP46527 198 aa8.2□□□□□ -1.1
TRAPPC4-211ENST00000533012 ZNF138P52744 262 aa8.2□□□□□ -1.1
TRAPPC4-211ENST00000533012 GNG5P63218 68 aa8.2□□□□□ -1.1
TRAPPC4-211ENST00000533012 GOLT1AQ6ZVE7 132 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms