RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 CMTM2Q8TAZ6 248 aa8.67□□□□□ -1.02
USH1C-208ENST00000529563 RPUSD4Q96CM3 377 aaKnown RBP8.67□□□□□ -1.02
USH1C-208ENST00000529563 C17orf77Q96MU5 243 aa8.67□□□□□ -1.02
USH1C-208ENST00000529563 ZNF331Q9NQX6 463 aaPredicted RBP8.67□□□□□ -1.02
USH1C-208ENST00000529563 PLA2G2EQ9NZK7 142 aa8.67□□□□□ -1.02
USH1C-208ENST00000529563 YTHDF2Q9Y5A9 579 aaKnown RBP8.67□□□□□ -1.02
USH1C-208ENST00000529563 DNAH6Q9C0G6 4158 aa8.66□□□□□ -1.02
USH1C-208ENST00000529563 A0A1B0GVG6 124 aa8.66□□□□□ -1.02
USH1C-208ENST00000529563 A0A1B0GVY2 172 aa8.66□□□□□ -1.02
USH1C-208ENST00000529563 F6UB75 175 aa8.66□□□□□ -1.02
USH1C-208ENST00000529563 H3BQ15 152 aa8.66□□□□□ -1.02
USH1C-208ENST00000529563 SOCS3O14543 225 aa8.66□□□□□ -1.02
USH1C-208ENST00000529563 ZNF253O75346 499 aa8.66□□□□□ -1.02
USH1C-208ENST00000529563 CXorf1O96002 111 aa8.66□□□□□ -1.02
USH1C-208ENST00000529563 IGLC2P0DOY2 106 aa8.66□□□□□ -1.02
USH1C-208ENST00000529563 RANP62826 216 aaKnown RBP8.66□□□□□ -1.02
USH1C-208ENST00000529563 RAB24Q969Q5 203 aa8.66□□□□□ -1.02
USH1C-208ENST00000529563 ZNF586Q9NXT0 402 aa8.66□□□□□ -1.02
USH1C-208ENST00000529563 RYR1P21817 5038 aa8.66□□□□□ -1.02
USH1C-208ENST00000529563 A0A0J9YX75 114 aa8.65□□□□□ -1.02
USH1C-208ENST00000529563 UMAD1C9J7I0 102 aa8.65□□□□□ -1.02
USH1C-208ENST00000529563 TEX46H3BTG2 121 aa8.65□□□□□ -1.02
USH1C-208ENST00000529563 MRPS12O15235 138 aaKnown RBP8.65□□□□□ -1.02
USH1C-208ENST00000529563 SEC11BP0C7V7 166 aa8.65□□□□□ -1.02
USH1C-208ENST00000529563 ICAM4Q14773 271 aa8.65□□□□□ -1.02
USH1C-208ENST00000529563 RNF212Q495C1 297 aa8.65□□□□□ -1.02
USH1C-208ENST00000529563 C1orf134Q5TEV5 83 aa8.65□□□□□ -1.02
USH1C-208ENST00000529563 TMEM88Q6PEY1 159 aa8.65□□□□□ -1.02
USH1C-208ENST00000529563 BAP18Q8IXM2 172 aa8.65□□□□□ -1.02
USH1C-208ENST00000529563 C20orf173Q96LM9 149 aa8.65□□□□□ -1.02
USH1C-208ENST00000529563 CLUHP3Q96NS8 147 aa8.65□□□□□ -1.02
USH1C-208ENST00000529563 CYTL1Q9NRR1 136 aa8.65□□□□□ -1.02
USH1C-208ENST00000529563 TMEM167BQ9NRX6 74 aa8.65□□□□□ -1.02
USH1C-208ENST00000529563 TRAV8-2A0A0B4J237 113 aa8.64□□□□□ -1.03
USH1C-208ENST00000529563 CTXND1A0A1B0GTU2 59 aa8.64□□□□□ -1.03
USH1C-208ENST00000529563 SLC17A3O00476 420 aa8.64□□□□□ -1.03
USH1C-208ENST00000529563 INSP01308 110 aa8.64□□□□□ -1.03
USH1C-208ENST00000529563 ARL14EPLP0DKL9 152 aa8.64□□□□□ -1.03
USH1C-208ENST00000529563 SLC51BQ86UW2 128 aa8.64□□□□□ -1.03
USH1C-208ENST00000529563 LYPD1Q8N2G4 141 aa8.64□□□□□ -1.03
USH1C-208ENST00000529563 OR8A1Q8NGG7 326 aa8.64□□□□□ -1.03
USH1C-208ENST00000529563 FAM213BQ8TBF2 198 aa8.64□□□□□ -1.03
USH1C-208ENST00000529563 RXFP4Q8TDU9 374 aa8.64□□□□□ -1.03
USH1C-208ENST00000529563 FAM167A-AS1Q96KT0 104 aa8.64□□□□□ -1.03
USH1C-208ENST00000529563 RPH3ALQ9UNE2 315 aa8.64□□□□□ -1.03
USH1C-208ENST00000529563 EIF3GO75821 320 aaKnown RBP eCLIP8.63□□□□□ -1.03
USH1C-208ENST00000529563 TSPOP30536 169 aa8.63□□□□□ -1.03
USH1C-208ENST00000529563 CNN1P51911 297 aaKnown RBP8.63□□□□□ -1.03
USH1C-208ENST00000529563 LGALSLQ3ZCW2 172 aaPredicted RBP8.63□□□□□ -1.03
USH1C-208ENST00000529563 TMEM78Q5T7P6 136 aa8.63□□□□□ -1.03
USH1C-208ENST00000529563 C1orf158Q8N1D5 194 aa8.63□□□□□ -1.03
USH1C-208ENST00000529563 EXOC3-AS1Q8N2X6 119 aa8.63□□□□□ -1.03
USH1C-208ENST00000529563 C15orf53Q8NAA6 179 aa8.63□□□□□ -1.03
USH1C-208ENST00000529563 TMED6Q8WW62 240 aa8.63□□□□□ -1.03
USH1C-208ENST00000529563 FXYD5Q96DB9 178 aa8.63□□□□□ -1.03
USH1C-208ENST00000529563 MRPL53Q96EL3 112 aaKnown RBP8.63□□□□□ -1.03
USH1C-208ENST00000529563 SAT2Q96F10 170 aaPredicted RBP8.63□□□□□ -1.03
USH1C-208ENST00000529563 IGF2BP2-AS1Q96M15 143 aa8.63□□□□□ -1.03
USH1C-208ENST00000529563 Q9H3A6 140 aa8.63□□□□□ -1.03
USH1C-208ENST00000529563 KIAA1109Q2LD37 5005 aa8.63□□□□□ -1.03
USH1C-208ENST00000529563 MAP1LC3B2A6NCE7 125 aa8.62□□□□□ -1.03
USH1C-208ENST00000529563 PGPA6NDG6 321 aa8.62□□□□□ -1.03
USH1C-208ENST00000529563 K7EQM0 130 aa8.62□□□□□ -1.03
USH1C-208ENST00000529563 STAG3L2P0CL84 134 aa8.62□□□□□ -1.03
USH1C-208ENST00000529563 STAG3L3P0CL85 134 aa8.62□□□□□ -1.03
USH1C-208ENST00000529563 DEFB130BP0DP73 79 aa8.62□□□□□ -1.03
USH1C-208ENST00000529563 DEFB130AP0DP74 79 aa8.62□□□□□ -1.03
USH1C-208ENST00000529563 GCHFRP30047 84 aa8.62□□□□□ -1.03
USH1C-208ENST00000529563 PHYHIPLQ96FC7 376 aa8.62□□□□□ -1.03
USH1C-208ENST00000529563 MAP1LC3BQ9GZQ8 125 aa8.62□□□□□ -1.03
USH1C-208ENST00000529563 OTORQ9NRC9 128 aa8.62□□□□□ -1.03
USH1C-208ENST00000529563 ZNF705GA8MUZ8 300 aaPredicted RBP8.61□□□□□ -1.03
USH1C-208ENST00000529563 F5H768 121 aa8.61□□□□□ -1.03
USH1C-208ENST00000529563 BOLA2-SMG1P6H3BVE0 249 aa8.61□□□□□ -1.03
USH1C-208ENST00000529563 M0R2Z0 102 aa8.61□□□□□ -1.03
USH1C-208ENST00000529563 NUDT3O95989 172 aa8.61□□□□□ -1.03
USH1C-208ENST00000529563 SLC25A5P05141 298 aaKnown RBP8.61□□□□□ -1.03
USH1C-208ENST00000529563 LEPP41159 167 aa8.61□□□□□ -1.03
USH1C-208ENST00000529563 RAB5CP51148 216 aa8.61□□□□□ -1.03
USH1C-208ENST00000529563 SPINK13Q1W4C9 94 aa8.61□□□□□ -1.03
USH1C-208ENST00000529563 DPPA3Q6W0C5 159 aa8.61□□□□□ -1.03
USH1C-208ENST00000529563 Q6ZR54 194 aa8.61□□□□□ -1.03
USH1C-208ENST00000529563 ZNF575Q86XF7 245 aa8.61□□□□□ -1.03
USH1C-208ENST00000529563 SFT2D1Q8WV19 159 aa8.61□□□□□ -1.03
USH1C-208ENST00000529563 PCLOQ9Y6V0 5065 aa8.61□□□□□ -1.03
USH1C-208ENST00000529563 LYRM9A8MSI8 78 aa8.6□□□□□ -1.03
USH1C-208ENST00000529563 M0R3E3 92 aa8.6□□□□□ -1.03
USH1C-208ENST00000529563 NDUFB4O95168 129 aa8.6□□□□□ -1.03
USH1C-208ENST00000529563 IFNA7P01567 189 aa8.6□□□□□ -1.03
USH1C-208ENST00000529563 H2AFB1P0C5Y9 115 aa8.6□□□□□ -1.03
USH1C-208ENST00000529563 PRB4P10163 310 aaPredicted RBP8.6□□□□□ -1.03
USH1C-208ENST00000529563 HTN1P15515 57 aa8.6□□□□□ -1.03
USH1C-208ENST00000529563 FGF8P55075 233 aaPredicted RBP8.6□□□□□ -1.03
USH1C-208ENST00000529563 FAM3BP58499 235 aaPredicted RBP8.6□□□□□ -1.03
USH1C-208ENST00000529563 LINC01587Q99440 93 aa8.6□□□□□ -1.03
USH1C-208ENST00000529563 A0A1B0GV50 99 aa8.59□□□□□ -1.03
USH1C-208ENST00000529563 J3KRW8 73 aa8.59□□□□□ -1.03
USH1C-208ENST00000529563 CD300CQ08708 224 aa8.59□□□□□ -1.03
USH1C-208ENST00000529563 C9orf62Q8N4C0 152 aa8.59□□□□□ -1.03
USH1C-208ENST00000529563 ZNF503Q96F45 646 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms