RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 OR1L4Q8NGR5 311 aa10.12□□□□□ -0.79
CAPN1-212ENST00000527887 SFT2D1Q8WV19 159 aa10.12□□□□□ -0.79
CAPN1-212ENST00000527887 PCNPQ8WW12 178 aaKnown RBP10.12□□□□□ -0.79
CAPN1-212ENST00000527887 PFDN5Q99471 154 aa10.12□□□□□ -0.79
CAPN1-212ENST00000527887 INSP01308 110 aa10.11□□□□□ -0.79
CAPN1-212ENST00000527887 ZNF726P1Q15940 193 aa10.11□□□□□ -0.79
CAPN1-212ENST00000527887 MIC13Q5XKP0 118 aa10.11□□□□□ -0.79
CAPN1-212ENST00000527887 ZNF738Q8NE65 137 aa10.11□□□□□ -0.79
CAPN1-212ENST00000527887 RAB24Q969Q5 203 aa10.11□□□□□ -0.79
CAPN1-212ENST00000527887 FAM210AQ96ND0 272 aa10.11□□□□□ -0.79
CAPN1-212ENST00000527887 MRPL32Q9BYC8 188 aaKnown RBP10.11□□□□□ -0.79
CAPN1-212ENST00000527887 DNAJC4Q9NNZ3 241 aa10.11□□□□□ -0.79
CAPN1-212ENST00000527887 YTHDF2Q9Y5A9 579 aaKnown RBP10.11□□□□□ -0.79
CAPN1-212ENST00000527887 LYRM9A8MSI8 78 aa10.1□□□□□ -0.79
CAPN1-212ENST00000527887 KRBOX1C9JBD0 128 aa10.1□□□□□ -0.79
CAPN1-212ENST00000527887 CDC34P49427 236 aaPredicted RBP10.1□□□□□ -0.79
CAPN1-212ENST00000527887 PEA15Q15121 130 aa10.1□□□□□ -0.79
CAPN1-212ENST00000527887 PSG3Q16557 428 aa10.1□□□□□ -0.79
CAPN1-212ENST00000527887 PATE2Q6UY27 113 aa10.1□□□□□ -0.79
CAPN1-212ENST00000527887 BPIFA4PQ86YQ2 179 aa10.1□□□□□ -0.79
CAPN1-212ENST00000527887 TMEM256Q8N2U0 113 aa10.1□□□□□ -0.79
CAPN1-212ENST00000527887 OR8A1Q8NGG7 326 aa10.1□□□□□ -0.79
CAPN1-212ENST00000527887 SUN5Q8TC36 379 aa10.1□□□□□ -0.79
CAPN1-212ENST00000527887 UHRF2Q96PU4 802 aa10.1□□□□□ -0.79
CAPN1-212ENST00000527887 MAP1LC3B2A6NCE7 125 aa10.09□□□□□ -0.79
CAPN1-212ENST00000527887 CRXO43186 299 aaPredicted RBP10.09□□□□□ -0.79
CAPN1-212ENST00000527887 IFNA1P01562 189 aa10.09□□□□□ -0.79
CAPN1-212ENST00000527887 STAG3L2P0CL84 134 aa10.09□□□□□ -0.79
CAPN1-212ENST00000527887 STAG3L3P0CL85 134 aa10.09□□□□□ -0.79
CAPN1-212ENST00000527887 TAS2R45P59539 299 aa10.09□□□□□ -0.79
CAPN1-212ENST00000527887 DAD1P61803 113 aa10.09□□□□□ -0.79
CAPN1-212ENST00000527887 SPINK13Q1W4C9 94 aa10.09□□□□□ -0.79
CAPN1-212ENST00000527887 RNF212Q495C1 297 aa10.09□□□□□ -0.79
CAPN1-212ENST00000527887 IGFL4Q6B9Z1 124 aa10.09□□□□□ -0.79
CAPN1-212ENST00000527887 LCN15Q6UWW0 184 aa10.09□□□□□ -0.79
CAPN1-212ENST00000527887 RNF182Q8N6D2 247 aa10.09□□□□□ -0.79
CAPN1-212ENST00000527887 TXNDC17Q9BRA2 123 aa10.09□□□□□ -0.79
CAPN1-212ENST00000527887 SLC50A1Q9BRV3 221 aa10.09□□□□□ -0.79
CAPN1-212ENST00000527887 MAP1LC3BQ9GZQ8 125 aa10.09□□□□□ -0.79
CAPN1-212ENST00000527887 PPP1R14DQ9NXH3 145 aa10.09□□□□□ -0.79
CAPN1-212ENST00000527887 FUT9Q9Y231 359 aa10.09□□□□□ -0.79
CAPN1-212ENST00000527887 M0R2Z0 102 aa10.08□□□□□ -0.8
CAPN1-212ENST00000527887 MRPS12O15235 138 aaKnown RBP10.08□□□□□ -0.8
CAPN1-212ENST00000527887 CXorf1O96002 111 aa10.08□□□□□ -0.8
CAPN1-212ENST00000527887 LGALS9BQ3B8N2 356 aa10.08□□□□□ -0.8
CAPN1-212ENST00000527887 KHDC3LQ587J8 217 aa10.08□□□□□ -0.8
CAPN1-212ENST00000527887 PQLC2Q6ZP29 291 aa10.08□□□□□ -0.8
CAPN1-212ENST00000527887 LINC00305Q7Z4B0 112 aa10.08□□□□□ -0.8
CAPN1-212ENST00000527887 MANBALQ9NQG1 85 aa10.08□□□□□ -0.8
CAPN1-212ENST00000527887 ARL2-SNX15V9GYD0 113 aa10.08□□□□□ -0.8
CAPN1-212ENST00000527887 DNAH2Q9P225 4427 aa10.07□□□□□ -0.8
CAPN1-212ENST00000527887 RBFOX3A6NFN3 312 aa10.07□□□□□ -0.8
CAPN1-212ENST00000527887 COX7A2P2O60397 106 aa10.07□□□□□ -0.8
CAPN1-212ENST00000527887 HIST1H1AQ02539 215 aaPredicted RBP10.07□□□□□ -0.8
CAPN1-212ENST00000527887 GUK1Q16774 197 aa10.07□□□□□ -0.8
CAPN1-212ENST00000527887 FAM122CQ6P4D5 195 aa10.07□□□□□ -0.8
CAPN1-212ENST00000527887 C15orf53Q8NAA6 179 aa10.07□□□□□ -0.8
CAPN1-212ENST00000527887 RPUSD4Q96CM3 377 aaKnown RBP10.07□□□□□ -0.8
CAPN1-212ENST00000527887 C20orf144Q9BQM9 153 aa10.07□□□□□ -0.8
CAPN1-212ENST00000527887 ZNF331Q9NQX6 463 aaPredicted RBP10.07□□□□□ -0.8
CAPN1-212ENST00000527887 DNAH17Q9UFH2 4485 aa10.07□□□□□ -0.8
CAPN1-212ENST00000527887 ZNF705GA8MUZ8 300 aaPredicted RBP10.06□□□□□ -0.8
CAPN1-212ENST00000527887 CDKN1BP46527 198 aa10.06□□□□□ -0.8
CAPN1-212ENST00000527887 FAM3BP58499 235 aaPredicted RBP10.06□□□□□ -0.8
CAPN1-212ENST00000527887 TAS2R60P59551 318 aa10.06□□□□□ -0.8
CAPN1-212ENST00000527887 CCL20P78556 96 aa10.06□□□□□ -0.8
CAPN1-212ENST00000527887 ZNF506Q5JVG8 444 aa10.06□□□□□ -0.8
CAPN1-212ENST00000527887 C10orf113Q5VZT2 155 aa10.06□□□□□ -0.8
CAPN1-212ENST00000527887 ZNF493Q6ZR52 646 aa10.06□□□□□ -0.8
CAPN1-212ENST00000527887 UBE2DNLQ8IWF7 75 aa10.06□□□□□ -0.8
CAPN1-212ENST00000527887 TMEM37Q8WXS4 190 aa10.06□□□□□ -0.8
CAPN1-212ENST00000527887 TMEM167BQ9NRX6 74 aa10.06□□□□□ -0.8
CAPN1-212ENST00000527887 VAX2Q9UIW0 290 aa10.06□□□□□ -0.8
CAPN1-212ENST00000527887 TMEM218A2RU14 115 aa10.05□□□□□ -0.8
CAPN1-212ENST00000527887 HTN3P15516 51 aa10.05□□□□□ -0.8
CAPN1-212ENST00000527887 GCSAMLQ5JQS6 135 aa10.05□□□□□ -0.8
CAPN1-212ENST00000527887 LINC01587Q99440 93 aa10.05□□□□□ -0.8
CAPN1-212ENST00000527887 EIF5A2Q9GZV4 153 aaKnown RBP10.05□□□□□ -0.8
CAPN1-212ENST00000527887 TRAV12-2A0A075B6T6 113 aa10.04□□□□□ -0.8
CAPN1-212ENST00000527887 H7BYZ3 331 aa10.04□□□□□ -0.8
CAPN1-212ENST00000527887 BCL2P10415 239 aa10.04□□□□□ -0.8
CAPN1-212ENST00000527887 C10orf91Q5T1B1 145 aa10.04□□□□□ -0.8
CAPN1-212ENST00000527887 TMEM88Q6PEY1 159 aa10.04□□□□□ -0.8
CAPN1-212ENST00000527887 SSX7Q7RTT5 188 aa10.04□□□□□ -0.8
CAPN1-212ENST00000527887 OR10J6PQ8NGY7 276 aa10.04□□□□□ -0.8
CAPN1-212ENST00000527887 C16orf74Q96GX8 76 aa10.04□□□□□ -0.8
CAPN1-212ENST00000527887 FAT2Q9NYQ8 4349 aa10.03□□□□□ -0.8
CAPN1-212ENST00000527887 CBY3A6NI87 242 aa10.03□□□□□ -0.8
CAPN1-212ENST00000527887 ZNF253O75346 499 aa10.03□□□□□ -0.8
CAPN1-212ENST00000527887 IGLC2P0DOY2 106 aa10.03□□□□□ -0.8
CAPN1-212ENST00000527887 GCHFRP30047 84 aa10.03□□□□□ -0.8
CAPN1-212ENST00000527887 SEC11CQ9BY50 192 aa10.03□□□□□ -0.8
CAPN1-212ENST00000527887 NKX6-2Q9C056 277 aaPredicted RBP10.03□□□□□ -0.8
CAPN1-212ENST00000527887 TREM1Q9NP99 234 aa10.03□□□□□ -0.8
CAPN1-212ENST00000527887 GNG13Q9P2W3 67 aa10.03□□□□□ -0.8
CAPN1-212ENST00000527887 TIMM8BQ9Y5J9 83 aaPredicted RBP10.03□□□□□ -0.8
CAPN1-212ENST00000527887 HERC2O95714 4834 aa10.03□□□□□ -0.8
CAPN1-212ENST00000527887 PLAC8L1A1L4L8 177 aa10.02□□□□□ -0.81
CAPN1-212ENST00000527887 TMEM250H0YL14 139 aa10.02□□□□□ -0.81
CAPN1-212ENST00000527887 ATP5G1P05496 136 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms