RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 BAXQ07812 192 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 ZNF415Q09FC8 603 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 EGFEM1PQ0D2K5 195 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 ZNF345Q14585 488 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 ZNF726P1Q15940 193 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 ATP6V1FQ16864 119 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 DEFB114Q30KQ6 69 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 KPRPQ5T749 579 aaPredicted RBP2.13□□□□□ -2.07
CSDE1-208ENST00000524652 LEMD1Q68G75 181 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 ETFRF1Q6IPR1 90 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 C16orf54Q6UWD8 224 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 AKAP14Q86UN6 197 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 STX12Q86Y82 276 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 TMEM61Q8N0U2 210 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 KCNRGQ8N5I3 272 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 ASB13Q8WXK3 278 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 SAT2Q96F10 170 aaPredicted RBP2.13□□□□□ -2.07
CSDE1-208ENST00000524652 RNF2Q99496 336 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 ATP5SQ99766 215 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 OVOL2Q9BRP0 275 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 C20orf24Q9BUV8 137 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 PBDC1Q9BVG4 233 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 TMEM147Q9BVK8 224 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 GGACTQ9BVM4 153 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 RHPN1-AS1Q9BWJ2 59 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 SCRT1Q9BWW7 348 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 PARD6GQ9BYG4 376 aaPredicted RBP2.13□□□□□ -2.07
CSDE1-208ENST00000524652 SLC25A39Q9BZJ4 359 aaPredicted RBP2.13□□□□□ -2.07
CSDE1-208ENST00000524652 MFFQ9GZY8 342 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 SLC25A31Q9H0C2 315 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 WFDC10AQ9H1F0 79 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 ARV1Q9H2C2 271 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 DAZ1Q9NQZ3 744 aaKnown RBP2.13□□□□□ -2.07
CSDE1-208ENST00000524652 UQCC1Q9NVA1 299 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 SIGLEC8Q9NYZ4 499 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 DOK5Q9P104 306 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 SMPXQ9UHP9 88 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 PRO0461Q9UI25 63 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 PXMP4Q9Y6I8 212 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 ALMS1Q8TCU4 4167 aa2.13□□□□□ -2.07
CSDE1-208ENST00000524652 DNAH17Q9UFH2 4485 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 IGKV3-7A0A075B6H7 116 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 ZNF98A6NK75 572 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 H3BTX0 84 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 K7EIL1 84 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 SLC17A3O00476 420 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 CYB5BO43169 146 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 CFDP00746 253 aaPredicted RBP2.12□□□□□ -2.07
CSDE1-208ENST00000524652 CD7P09564 240 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 OR5G3P0C626 314 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 GP9P14770 177 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 ORM2P19652 201 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 HLA-DMBP28068 263 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 RPL29P47914 159 aaKnown RBP2.12□□□□□ -2.07
CSDE1-208ENST00000524652 FHITP49789 147 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 XGP55808 180 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 B2MP61769 119 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 HBG1P69891 147 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 HBG2P69892 147 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 FGL1Q08830 312 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 FAM106AQ4KMX7 169 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 C9orf66Q5T8R8 295 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 TMUB2Q71RG4 321 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 MIR17HGQ75NE6 70 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 LINC00305Q7Z4B0 112 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 RPP25LQ8N5L8 163 aaKnown RBP2.12□□□□□ -2.07
CSDE1-208ENST00000524652 HSD17B11Q8NBQ5 300 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 OR1B1Q8NGR6 318 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 OR2G3Q8NGZ4 309 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 DCANP1Q8TF63 244 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 Q8WTZ3 238 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 FAM167A-AS1Q96KT0 104 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 GINS3Q9BRX5 216 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 SLC25A2Q9BXI2 301 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 ARL6Q9H0F7 186 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 PARLQ9H300 379 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 SLC25A22Q9H936 323 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 SLC39A9Q9NUM3 307 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 TECRQ9NZ01 308 aaKnown RBP2.12□□□□□ -2.07
CSDE1-208ENST00000524652 UBQLN2Q9UHD9 624 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 RABAC1Q9UI14 185 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 CELA1Q9UNI1 258 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 ZNF256Q9Y2P7 627 aaPredicted RBP2.12□□□□□ -2.07
CSDE1-208ENST00000524652 UFC1Q9Y3C8 167 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 NACAE9PAV3 2078 aa2.12□□□□□ -2.07
CSDE1-208ENST00000524652 A0A087X0K7 114 aa2.11□□□□□ -2.07
CSDE1-208ENST00000524652 TRAV8-2A0A0B4J237 113 aa2.11□□□□□ -2.07
CSDE1-208ENST00000524652 A0A0D9SG52 128 aa2.11□□□□□ -2.07
CSDE1-208ENST00000524652 RBMY1BA6NDE4 496 aaKnown RBP2.11□□□□□ -2.07
CSDE1-208ENST00000524652 RBMY1EA6NEQ0 496 aaKnown RBP2.11□□□□□ -2.07
CSDE1-208ENST00000524652 PGPEP1LA6NFU8 196 aa2.11□□□□□ -2.07
CSDE1-208ENST00000524652 H3BQ15 152 aa2.11□□□□□ -2.07
CSDE1-208ENST00000524652 J3KRW8 73 aa2.11□□□□□ -2.07
CSDE1-208ENST00000524652 K7EQG2 157 aa2.11□□□□□ -2.07
CSDE1-208ENST00000524652 HMGB3O15347 200 aaKnown RBP2.11□□□□□ -2.07
CSDE1-208ENST00000524652 COX7A2P2O60397 106 aa2.11□□□□□ -2.07
CSDE1-208ENST00000524652 MPDU1O75352 247 aa2.11□□□□□ -2.07
CSDE1-208ENST00000524652 RBMY1DP0C7P1 496 aaKnown RBP2.11□□□□□ -2.07
CSDE1-208ENST00000524652 IGLC2P0DOY2 106 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms