RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 A0A0G2JRQ6 117 aa12.99□□□□□ -0.33
USP42-207ENST00000521713 A0A1W2PNU3 283 aaPredicted RBP12.99□□□□□ -0.33
USP42-207ENST00000521713 KIR2DL5AQ8N109 375 aa12.99□□□□□ -0.33
USP42-207ENST00000521713 LYPD6BQ8NI32 183 aa12.99□□□□□ -0.33
USP42-207ENST00000521713 ZNRD1Q9P1U0 126 aa12.99□□□□□ -0.33
USP42-207ENST00000521713 IGKV2-40A0A087WW87 121 aaPredicted RBP12.99□□□□□ -0.33
USP42-207ENST00000521713 NDUFB8O95169 186 aa12.99□□□□□ -0.33
USP42-207ENST00000521713 IGKV2D-40P01614 121 aaPredicted RBP12.99□□□□□ -0.33
USP42-207ENST00000521713 GRNP28799 593 aaKnown RBP12.99□□□□□ -0.33
USP42-207ENST00000521713 TMEM14BQ9NUH8 114 aa12.98□□□□□ -0.33
USP42-207ENST00000521713 SRRM4A7MD48 611 aaKnown RBP12.98□□□□□ -0.33
USP42-207ENST00000521713 LGALS9BQ3B8N2 356 aa12.98□□□□□ -0.33
USP42-207ENST00000521713 LGALS9CQ6DKI2 356 aa12.98□□□□□ -0.33
USP42-207ENST00000521713 Q86TA4 180 aa12.98□□□□□ -0.33
USP42-207ENST00000521713 SH2D1AO60880 128 aa12.98□□□□□ -0.33
USP42-207ENST00000521713 DUX4L9Q6RFH8 374 aaPredicted RBP12.98□□□□□ -0.33
USP42-207ENST00000521713 C9orf153Q5TBE3 101 aa12.98□□□□□ -0.33
USP42-207ENST00000521713 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.97□□□□□ -0.33
USP42-207ENST00000521713 FCN3O75636 299 aa12.97□□□□□ -0.33
USP42-207ENST00000521713 ZNF415Q09FC8 603 aa12.97□□□□□ -0.33
USP42-207ENST00000521713 PDE6HQ13956 83 aa12.97□□□□□ -0.33
USP42-207ENST00000521713 NDUFA4L2Q9NRX3 87 aa12.97□□□□□ -0.33
USP42-207ENST00000521713 PRADC1Q9BSG0 188 aa12.97□□□□□ -0.33
USP42-207ENST00000521713 C9JAW5 83 aa12.97□□□□□ -0.33
USP42-207ENST00000521713 INSP01308 110 aa12.97□□□□□ -0.33
USP42-207ENST00000521713 PPIFP30405 207 aaKnown RBP12.97□□□□□ -0.33
USP42-207ENST00000521713 DEFB113Q30KQ7 82 aa12.97□□□□□ -0.33
USP42-207ENST00000521713 BOD1L2Q8IYS8 172 aa12.97□□□□□ -0.33
USP42-207ENST00000521713 DNAJC30Q96LL9 226 aa12.97□□□□□ -0.33
USP42-207ENST00000521713 RCHY1Q96PM5 261 aa12.97□□□□□ -0.33
USP42-207ENST00000521713 GAGE12HA6NDE8 117 aa12.96□□□□□ -0.33
USP42-207ENST00000521713 LINC01619G3V211 115 aa12.96□□□□□ -0.33
USP42-207ENST00000521713 C15orf65H3BRN8 121 aa12.96□□□□□ -0.33
USP42-207ENST00000521713 IGLL1P15814 213 aa12.96□□□□□ -0.33
USP42-207ENST00000521713 WFDC12Q8WWY7 111 aa12.96□□□□□ -0.33
USP42-207ENST00000521713 EDA2RQ9HAV5 297 aa12.96□□□□□ -0.33
USP42-207ENST00000521713 A0A1W2PPM0 123 aa12.96□□□□□ -0.33
USP42-207ENST00000521713 CRPP02741 224 aa12.96□□□□□ -0.33
USP42-207ENST00000521713 INAFM2P0DMQ5 153 aa12.96□□□□□ -0.33
USP42-207ENST00000521713 SHANK2-AS3Q9BTD1 123 aa12.96□□□□□ -0.33
USP42-207ENST00000521713 SPG11Q96JI7 2443 aa12.95□□□□□ -0.34
USP42-207ENST00000521713 PRB1P04280 392 aa12.95□□□□□ -0.34
USP42-207ENST00000521713 RASL10AQ92737 203 aa12.95□□□□□ -0.34
USP42-207ENST00000521713 H3BMM0 161 aa12.95□□□□□ -0.34
USP42-207ENST00000521713 RPL35AP18077 110 aaKnown RBP12.95□□□□□ -0.34
USP42-207ENST00000521713 PLA2G5P39877 138 aa12.95□□□□□ -0.34
USP42-207ENST00000521713 UBE2WQ96B02 151 aa12.95□□□□□ -0.34
USP42-207ENST00000521713 SMIM27A0A1W2PRY6 76 aa12.94□□□□□ -0.34
USP42-207ENST00000521713 BVES-AS1Q5T3Y7 98 aa12.94□□□□□ -0.34
USP42-207ENST00000521713 C8orf31Q8N9H6 132 aa12.94□□□□□ -0.34
USP42-207ENST00000521713 C11orf52Q96A22 123 aa12.94□□□□□ -0.34
USP42-207ENST00000521713 DAZAP2Q15038 168 aaPredicted RBP12.94□□□□□ -0.34
USP42-207ENST00000521713 V9GYV3 84 aa12.94□□□□□ -0.34
USP42-207ENST00000521713 NDUFS7O75251 213 aa12.94□□□□□ -0.34
USP42-207ENST00000521713 ELANEP08246 267 aa12.94□□□□□ -0.34
USP42-207ENST00000521713 STPG4Q8N801 248 aa12.94□□□□□ -0.34
USP42-207ENST00000521713 PHLDA1Q8WV24 401 aaPredicted RBP12.94□□□□□ -0.34
USP42-207ENST00000521713 MYMXA0A1B0GTQ4 84 aa12.93□□□□□ -0.34
USP42-207ENST00000521713 G3V318 75 aa12.93□□□□□ -0.34
USP42-207ENST00000521713 ADORA2A-AS1P86434 159 aa12.93□□□□□ -0.34
USP42-207ENST00000521713 AMN1Q8IY45 258 aa12.93□□□□□ -0.34
USP42-207ENST00000521713 TMEM75Q8N9X5 138 aa12.93□□□□□ -0.34
USP42-207ENST00000521713 Q8NFD4 153 aa12.93□□□□□ -0.34
USP42-207ENST00000521713 C22orf46C9J442 243 aa12.93□□□□□ -0.34
USP42-207ENST00000521713 MLANAQ16655 118 aa12.93□□□□□ -0.34
USP42-207ENST00000521713 CHCHD5Q9BSY4 110 aa12.93□□□□□ -0.34
USP42-207ENST00000521713 SELENOKQ9Y6D0 94 aa12.93□□□□□ -0.34
USP42-207ENST00000521713 OTOGLQ3ZCN5 2332 aa12.93□□□□□ -0.34
USP42-207ENST00000521713 A0A1B0GUS0 222 aa12.93□□□□□ -0.34
USP42-207ENST00000521713 HIST1H4AP62805 103 aaKnown RBP12.93□□□□□ -0.34
USP42-207ENST00000521713 ETDBQ3ZM63 59 aa12.93□□□□□ -0.34
USP42-207ENST00000521713 MCRIP2Q9BUT9 160 aaKnown RBP12.93□□□□□ -0.34
USP42-207ENST00000521713 IFITM1P13164 125 aa12.93□□□□□ -0.34
USP42-207ENST00000521713 PAX9P55771 341 aa12.93□□□□□ -0.34
USP42-207ENST00000521713 OR11H6Q8NGC7 330 aa12.93□□□□□ -0.34
USP42-207ENST00000521713 RPL36AP83881 106 aaKnown RBP12.92□□□□□ -0.34
USP42-207ENST00000521713 RPL36ALQ969Q0 106 aaKnown RBP12.92□□□□□ -0.34
USP42-207ENST00000521713 PRSS46E5RG02 174 aa12.92□□□□□ -0.34
USP42-207ENST00000521713 MALP21145 153 aa12.92□□□□□ -0.34
USP42-207ENST00000521713 DEFB131AP59861 70 aa12.92□□□□□ -0.34
USP42-207ENST00000521713 FAM104BQ5XKR9 115 aa12.92□□□□□ -0.34
USP42-207ENST00000521713 PLXND1Q9Y4D7 1925 aa12.92□□□□□ -0.34
USP42-207ENST00000521713 TRGV1A0A0A0MS02 117 aa12.91□□□□□ -0.34
USP42-207ENST00000521713 YLPM1P49750 1951 aaKnown RBP12.91□□□□□ -0.34
USP42-207ENST00000521713 ZNF726P1Q15940 193 aa12.91□□□□□ -0.34
USP42-207ENST00000521713 A0A087WX48 190 aa12.91□□□□□ -0.34
USP42-207ENST00000521713 C2orf16Q68DN1 1984 aa12.91□□□□□ -0.34
USP42-207ENST00000521713 IGLC7A0M8Q6 106 aa12.91□□□□□ -0.34
USP42-207ENST00000521713 IL15RAQ13261 267 aa12.91□□□□□ -0.34
USP42-207ENST00000521713 NDUFA4O00483 81 aa12.9□□□□□ -0.34
USP42-207ENST00000521713 UTF1Q5T230 341 aa12.9□□□□□ -0.34
USP42-207ENST00000521713 FBXL19-AS1Q494R0 122 aa12.9□□□□□ -0.34
USP42-207ENST00000521713 PYGO2Q9BRQ0 406 aa12.9□□□□□ -0.34
USP42-207ENST00000521713 ARMS2P0C7Q2 107 aa12.9□□□□□ -0.34
USP42-207ENST00000521713 Q8N8P6 123 aa12.9□□□□□ -0.34
USP42-207ENST00000521713 CITED1Q99966 193 aa12.9□□□□□ -0.34
USP42-207ENST00000521713 AZU1P20160 251 aa12.9□□□□□ -0.34
USP42-207ENST00000521713 ANKHD1Q8IWZ3 2542 aaKnown RBP12.9□□□□□ -0.34
USP42-207ENST00000521713 CTSZQ9UBR2 303 aa12.89□□□□□ -0.35
USP42-207ENST00000521713 UBE2DNLQ8IWF7 75 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms