RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 EML6Q6ZMW3 1958 aa1.57□□□□□ -2.16
PTPN12-214ENST00000520947 FBN3Q75N90 2809 aa1.57□□□□□ -2.16
PTPN12-214ENST00000520947 COL1A1P02452 1464 aaPredicted RBP1.56□□□□□ -2.16
PTPN12-214ENST00000520947 ADGRB2O60241 1585 aa1.56□□□□□ -2.16
PTPN12-214ENST00000520947 F8W1H4 67 aa1.56□□□□□ -2.16
PTPN12-214ENST00000520947 M0R2N4 97 aa1.56□□□□□ -2.16
PTPN12-214ENST00000520947 SMIM24O75264 130 aa1.56□□□□□ -2.16
PTPN12-214ENST00000520947 TCRAP04437 139 aa1.56□□□□□ -2.16
PTPN12-214ENST00000520947 COX4I1P13073 169 aa1.56□□□□□ -2.16
PTPN12-214ENST00000520947 IL9P15248 144 aa1.56□□□□□ -2.16
PTPN12-214ENST00000520947 HIST1H1BP16401 226 aaKnown RBP1.56□□□□□ -2.16
PTPN12-214ENST00000520947 ETV6P41212 452 aa1.56□□□□□ -2.16
PTPN12-214ENST00000520947 DIAPH2-AS1Q14236 149 aa1.56□□□□□ -2.16
PTPN12-214ENST00000520947 MPV17LQ2QL34 196 aa1.56□□□□□ -2.16
PTPN12-214ENST00000520947 TMEM244Q5VVB8 128 aa1.56□□□□□ -2.16
PTPN12-214ENST00000520947 CASC2Q6XLA1 102 aa1.56□□□□□ -2.16
PTPN12-214ENST00000520947 LINC00269Q8N2A0 174 aa1.56□□□□□ -2.16
PTPN12-214ENST00000520947 C15orf53Q8NAA6 179 aa1.56□□□□□ -2.16
PTPN12-214ENST00000520947 FAM107BQ9H098 131 aa1.56□□□□□ -2.16
PTPN12-214ENST00000520947 BANF2Q9H503 90 aa1.56□□□□□ -2.16
PTPN12-214ENST00000520947 SCN8AQ9UQD0 1980 aa1.56□□□□□ -2.16
PTPN12-214ENST00000520947 IGKV2-40A0A087WW87 121 aaPredicted RBP1.55□□□□□ -2.16
PTPN12-214ENST00000520947 LOC110117498A0A087WWA1 95 aa1.55□□□□□ -2.16
PTPN12-214ENST00000520947 A0A096LPI6 279 aa1.55□□□□□ -2.16
PTPN12-214ENST00000520947 INE1O15225 51 aa1.55□□□□□ -2.16
PTPN12-214ENST00000520947 IGKV2D-40P01614 121 aaPredicted RBP1.55□□□□□ -2.16
PTPN12-214ENST00000520947 SLC25A5P05141 298 aaKnown RBP1.55□□□□□ -2.16
PTPN12-214ENST00000520947 BLCAPP62952 87 aa1.55□□□□□ -2.16
PTPN12-214ENST00000520947 HIST1H1AQ02539 215 aaPredicted RBP1.55□□□□□ -2.16
PTPN12-214ENST00000520947 CCSMST1Q4G0I0 132 aa1.55□□□□□ -2.16
PTPN12-214ENST00000520947 FOXI2Q6ZQN5 318 aa1.55□□□□□ -2.16
PTPN12-214ENST00000520947 MMGT1Q8N4V1 131 aa1.55□□□□□ -2.16
PTPN12-214ENST00000520947 DEFB119Q8N690 84 aa1.55□□□□□ -2.16
PTPN12-214ENST00000520947 OR8J3Q8NGG0 315 aa1.55□□□□□ -2.16
PTPN12-214ENST00000520947 TPT1P8Q9HAU6 139 aa1.55□□□□□ -2.16
PTPN12-214ENST00000520947 CDC42SE1Q9NRR8 79 aa1.55□□□□□ -2.16
PTPN12-214ENST00000520947 FKBP11Q9NYL4 201 aa1.55□□□□□ -2.16
PTPN12-214ENST00000520947 KDM5CP41229 1560 aa1.55□□□□□ -2.16
PTPN12-214ENST00000520947 SDK1Q7Z5N4 2213 aa1.54□□□□□ -2.16
PTPN12-214ENST00000520947 C3orf85A0A1B0GTC6 90 aa1.54□□□□□ -2.16
PTPN12-214ENST00000520947 H3BRM9 83 aa1.54□□□□□ -2.16
PTPN12-214ENST00000520947 NUPR1O60356 82 aa1.54□□□□□ -2.16
PTPN12-214ENST00000520947 SLC25A4P12235 298 aa1.54□□□□□ -2.16
PTPN12-214ENST00000520947 CCDC58Q4VC31 144 aa1.54□□□□□ -2.16
PTPN12-214ENST00000520947 Q6ZSA8 131 aa1.54□□□□□ -2.16
PTPN12-214ENST00000520947 CIB3Q96Q77 187 aaPredicted RBP1.54□□□□□ -2.16
PTPN12-214ENST00000520947 TSC22D3Q99576 134 aa1.54□□□□□ -2.16
PTPN12-214ENST00000520947 NABP2Q9BQ15 211 aa1.54□□□□□ -2.16
PTPN12-214ENST00000520947 METTL1Q9UBP6 276 aaKnown RBP1.54□□□□□ -2.16
PTPN12-214ENST00000520947 MPC1Q9Y5U8 109 aa1.54□□□□□ -2.16
PTPN12-214ENST00000520947 DISP2A7MBM2 1401 aa1.54□□□□□ -2.16
PTPN12-214ENST00000520947 CECR2Q9BXF3 1484 aa1.54□□□□□ -2.16
PTPN12-214ENST00000520947 COL24A1Q17RW2 1714 aa1.54□□□□□ -2.16
PTPN12-214ENST00000520947 LAMB4A4D0S4 1761 aa1.54□□□□□ -2.16
PTPN12-214ENST00000520947 XIRP1Q702N8 1843 aaKnown RBP1.54□□□□□ -2.16
PTPN12-214ENST00000520947 MYLKQ15746 1914 aa1.54□□□□□ -2.16
PTPN12-214ENST00000520947 IGKV3-7A0A075B6H7 116 aa1.53□□□□□ -2.16
PTPN12-214ENST00000520947 IGKV2-29A2NJV5 120 aaPredicted RBP1.53□□□□□ -2.16
PTPN12-214ENST00000520947 IFITM5A6NNB3 132 aa1.53□□□□□ -2.16
PTPN12-214ENST00000520947 ZNF727A8MUV8 499 aa1.53□□□□□ -2.16
PTPN12-214ENST00000520947 M0R2Z0 102 aa1.53□□□□□ -2.16
PTPN12-214ENST00000520947 NCR2O95944 276 aa1.53□□□□□ -2.16
PTPN12-214ENST00000520947 TSPAN19P0C672 248 aa1.53□□□□□ -2.16
PTPN12-214ENST00000520947 HLA-DRB4P13762 266 aa1.53□□□□□ -2.16
PTPN12-214ENST00000520947 AKR1D1P51857 326 aa1.53□□□□□ -2.16
PTPN12-214ENST00000520947 ARHGAP31Q2M1Z3 1444 aa1.53□□□□□ -2.16
PTPN12-214ENST00000520947 TMEM91Q6ZNR0 172 aa1.53□□□□□ -2.16
PTPN12-214ENST00000520947 FAM19A2Q8N3H0 131 aa1.53□□□□□ -2.16
PTPN12-214ENST00000520947 SMIM3Q9BZL3 60 aa1.53□□□□□ -2.16
PTPN12-214ENST00000520947 HLA-DRB4X5D2U9 266 aa1.53□□□□□ -2.16
PTPN12-214ENST00000520947 FER1L6Q2WGJ9 1857 aa1.52□□□□□ -2.17
PTPN12-214ENST00000520947 PRG4Q92954 1404 aaPredicted RBP1.52□□□□□ -2.17
PTPN12-214ENST00000520947 IGLV3-32A0A0A0MS00 114 aa1.52□□□□□ -2.17
PTPN12-214ENST00000520947 J3QR89 54 aa1.52□□□□□ -2.17
PTPN12-214ENST00000520947 GEMIN2O14893 280 aaKnown RBP1.52□□□□□ -2.17
PTPN12-214ENST00000520947 KDELR1P24390 212 aa1.52□□□□□ -2.17
PTPN12-214ENST00000520947 CKS2P33552 79 aa1.52□□□□□ -2.17
PTPN12-214ENST00000520947 PCBD1P61457 104 aa1.52□□□□□ -2.17
PTPN12-214ENST00000520947 SNRPD3P62318 126 aaKnown RBP1.52□□□□□ -2.17
PTPN12-214ENST00000520947 MIR22HGQ0VDD5 57 aa1.52□□□□□ -2.17
PTPN12-214ENST00000520947 GLYATL3Q5SZD4 288 aa1.52□□□□□ -2.17
PTPN12-214ENST00000520947 ZCCHC23Q6ZST2 131 aa1.52□□□□□ -2.17
PTPN12-214ENST00000520947 MYO5AQ9Y4I1 1855 aaKnown RBP1.52□□□□□ -2.17
PTPN12-214ENST00000520947 RP1P56715 2156 aa1.51□□□□□ -2.17
PTPN12-214ENST00000520947 SOGA1O94964 1423 aa1.51□□□□□ -2.17
PTPN12-214ENST00000520947 YPEL1O60688 119 aa1.51□□□□□ -2.17
PTPN12-214ENST00000520947 IGHV3-33P01772 117 aa1.51□□□□□ -2.17
PTPN12-214ENST00000520947 DNAJB13P59910 316 aa1.51□□□□□ -2.17
PTPN12-214ENST00000520947 IZUMO2Q6UXV1 221 aa1.51□□□□□ -2.17
PTPN12-214ENST00000520947 LINC00299Q6ZSB3 139 aa1.51□□□□□ -2.17
PTPN12-214ENST00000520947 TSTD1Q8NFU3 115 aa1.51□□□□□ -2.17
PTPN12-214ENST00000520947 OR10AC1Q8NH08 325 aa1.51□□□□□ -2.17
PTPN12-214ENST00000520947 OTOSQ8NHW6 89 aa1.51□□□□□ -2.17
PTPN12-214ENST00000520947 LINC00526Q96FQ7 95 aa1.51□□□□□ -2.17
PTPN12-214ENST00000520947 MRPL57Q9BQC6 102 aaKnown RBP1.51□□□□□ -2.17
PTPN12-214ENST00000520947 SLC35B3Q9H1N7 401 aa1.51□□□□□ -2.17
PTPN12-214ENST00000520947 TMEM14CQ9P0S9 112 aa1.51□□□□□ -2.17
PTPN12-214ENST00000520947 USP54Q70EL1 1684 aa1.51□□□□□ -2.17
PTPN12-214ENST00000520947 HELZ2Q9BYK8 2649 aaKnown RBP1.51□□□□□ -2.17
PTPN12-214ENST00000520947 HEATR5BQ9P2D3 2071 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms