RNA–Protein interactions for RNA: ENST00000517323.2

TRPS1-206, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 5

Gene TRPS1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-206ENST00000517323 HIST1H1AQ02539 215 aaPredicted RBP11.55□□□□□ -0.56
TRPS1-206ENST00000517323 KIR3DS1Q14943 382 aa11.55□□□□□ -0.56
TRPS1-206ENST00000517323 OXLD1Q5BKU9 147 aa11.55□□□□□ -0.56
TRPS1-206ENST00000517323 AGPAT4-IT1Q9H0P7 198 aa11.55□□□□□ -0.56
TRPS1-206ENST00000517323 ZMAT5Q9UDW3 170 aaKnown RBP11.55□□□□□ -0.56
TRPS1-206ENST00000517323 M0R036 132 aa11.55□□□□□ -0.56
TRPS1-206ENST00000517323 GNG4P50150 75 aa11.55□□□□□ -0.56
TRPS1-206ENST00000517323 MEOX2P50222 304 aa11.55□□□□□ -0.56
TRPS1-206ENST00000517323 Q86TA4 180 aa11.55□□□□□ -0.56
TRPS1-206ENST00000517323 NIPSNAP3BQ9BS92 247 aa11.55□□□□□ -0.56
TRPS1-206ENST00000517323 CARHSP1Q9Y2V2 147 aaKnown RBP11.55□□□□□ -0.56
TRPS1-206ENST00000517323 MGST1P10620 155 aaKnown RBP11.54□□□□□ -0.56
TRPS1-206ENST00000517323 RPL23P62829 140 aaKnown RBP11.54□□□□□ -0.56
TRPS1-206ENST00000517323 PAFAH1B2P68402 229 aa11.54□□□□□ -0.56
TRPS1-206ENST00000517323 TMEM183BQ1AE95 376 aa11.54□□□□□ -0.56
TRPS1-206ENST00000517323 ODF3L2Q3SX64 289 aa11.54□□□□□ -0.56
TRPS1-206ENST00000517323 FAM74A3Q4VXF1 159 aa11.54□□□□□ -0.56
TRPS1-206ENST00000517323 PRR27Q6MZM9 219 aa11.54□□□□□ -0.56
TRPS1-206ENST00000517323 SIGLEC8Q9NYZ4 499 aa11.54□□□□□ -0.56
TRPS1-206ENST00000517323 PSG8Q9UQ74 426 aa11.54□□□□□ -0.56
TRPS1-206ENST00000517323 TMEM241Q24JQ0 296 aa11.54□□□□□ -0.56
TRPS1-206ENST00000517323 LINC00322Q6ZN03 302 aaPredicted RBP11.54□□□□□ -0.56
TRPS1-206ENST00000517323 LINC01551Q86U37 167 aa11.54□□□□□ -0.56
TRPS1-206ENST00000517323 BAGE2Q86Y30 109 aa11.54□□□□□ -0.56
TRPS1-206ENST00000517323 MAP6D1Q9H9H5 199 aa11.54□□□□□ -0.56
TRPS1-206ENST00000517323 SDF2L1Q9HCN8 221 aa11.54□□□□□ -0.56
TRPS1-206ENST00000517323 SNRPD3P62318 126 aaKnown RBP11.53□□□□□ -0.56
TRPS1-206ENST00000517323 ACTL10Q5JWF8 245 aa11.53□□□□□ -0.56
TRPS1-206ENST00000517323 KLF12Q9Y4X4 402 aa11.53□□□□□ -0.56
TRPS1-206ENST00000517323 ID1P41134 155 aa11.52□□□□□ -0.56
TRPS1-206ENST00000517323 LTAP01374 205 aa11.52□□□□□ -0.57
TRPS1-206ENST00000517323 FXYD7P58549 80 aa11.52□□□□□ -0.57
TRPS1-206ENST00000517323 OR4B1Q8NGF8 309 aa11.52□□□□□ -0.57
TRPS1-206ENST00000517323 OR8A1Q8NGG7 326 aa11.52□□□□□ -0.57
TRPS1-206ENST00000517323 SPAG8Q99932 426 aaPredicted RBP11.52□□□□□ -0.57
TRPS1-206ENST00000517323 RNASE7Q9H1E1 156 aaKnown RBP11.52□□□□□ -0.57
TRPS1-206ENST00000517323 NAT8Q9UHE5 227 aa11.52□□□□□ -0.57
TRPS1-206ENST00000517323 CT45A10P0DMU9 189 aa11.51□□□□□ -0.57
TRPS1-206ENST00000517323 PRR9Q5T870 116 aa11.51□□□□□ -0.57
TRPS1-206ENST00000517323 TMEM75Q8N9X5 138 aa11.51□□□□□ -0.57
TRPS1-206ENST00000517323 ZC2HC1AQ96GY0 325 aa11.51□□□□□ -0.57
TRPS1-206ENST00000517323 FMC1Q96HJ9 113 aa11.51□□□□□ -0.57
TRPS1-206ENST00000517323 ZNF80P51504 273 aaPredicted RBP11.51□□□□□ -0.57
TRPS1-206ENST00000517323 C12orf57Q99622 126 aa11.51□□□□□ -0.57
TRPS1-206ENST00000517323 AKR1D1P51857 326 aa11.5□□□□□ -0.57
TRPS1-206ENST00000517323 WFDC9Q8NEX5 89 aa11.5□□□□□ -0.57
TRPS1-206ENST00000517323 OR4C46A6NHA9 309 aa11.5□□□□□ -0.57
TRPS1-206ENST00000517323 CRIP1P50238 77 aa11.5□□□□□ -0.57
TRPS1-206ENST00000517323 TMEM88Q6PEY1 159 aa11.5□□□□□ -0.57
TRPS1-206ENST00000517323 PRR25Q96S07 402 aa11.5□□□□□ -0.57
TRPS1-206ENST00000517323 A0A0J9YX75 114 aa11.49□□□□□ -0.57
TRPS1-206ENST00000517323 K7EQM0 130 aa11.49□□□□□ -0.57
TRPS1-206ENST00000517323 M0R2Z0 102 aa11.49□□□□□ -0.57
TRPS1-206ENST00000517323 CA1P00915 261 aaPredicted RBP11.49□□□□□ -0.57
TRPS1-206ENST00000517323 TMEM78Q5T7P6 136 aa11.49□□□□□ -0.57
TRPS1-206ENST00000517323 C9orf66Q5T8R8 295 aa11.49□□□□□ -0.57
TRPS1-206ENST00000517323 SVBPQ8N300 66 aa11.49□□□□□ -0.57
TRPS1-206ENST00000517323 OR10J6PQ8NGY7 276 aa11.49□□□□□ -0.57
TRPS1-206ENST00000517323 TCEAL7Q9BRU2 100 aa11.49□□□□□ -0.57
TRPS1-206ENST00000517323 MLST8Q9BVC4 326 aa11.49□□□□□ -0.57
TRPS1-206ENST00000517323 TRAV12-2A0A075B6T6 113 aa11.48□□□□□ -0.57
TRPS1-206ENST00000517323 C7orf77A4D0Y5 90 aa11.48□□□□□ -0.57
TRPS1-206ENST00000517323 RBMY1BA6NDE4 496 aaKnown RBP11.48□□□□□ -0.57
TRPS1-206ENST00000517323 RBMY1EA6NEQ0 496 aaKnown RBP11.48□□□□□ -0.57
TRPS1-206ENST00000517323 C9JCJ5 164 aa11.48□□□□□ -0.57
TRPS1-206ENST00000517323 RBMY1DP0C7P1 496 aaKnown RBP11.48□□□□□ -0.57
TRPS1-206ENST00000517323 MRPL53Q96EL3 112 aaKnown RBP11.48□□□□□ -0.57
TRPS1-206ENST00000517323 RPS10P5Q9NQ39 176 aa11.48□□□□□ -0.57
TRPS1-206ENST00000517323 BIN3Q9NQY0 253 aa11.48□□□□□ -0.57
TRPS1-206ENST00000517323 TRAV25A0A0B4J276 109 aa11.48□□□□□ -0.57
TRPS1-206ENST00000517323 TAS2R60P59551 318 aa11.48□□□□□ -0.57
TRPS1-206ENST00000517323 RNF212Q495C1 297 aa11.48□□□□□ -0.57
TRPS1-206ENST00000517323 C9orf47Q6ZRZ4 202 aa11.48□□□□□ -0.57
TRPS1-206ENST00000517323 CBLN2Q8IUK8 224 aa11.48□□□□□ -0.57
TRPS1-206ENST00000517323 ISOC2Q96AB3 205 aa11.48□□□□□ -0.57
TRPS1-206ENST00000517323 ZNF492Q9P255 531 aa11.48□□□□□ -0.57
TRPS1-206ENST00000517323 NPIPB6E9PJ23 425 aa11.47□□□□□ -0.57
TRPS1-206ENST00000517323 G3V4G9 280 aa11.47□□□□□ -0.57
TRPS1-206ENST00000517323 ZNF138P52744 262 aa11.47□□□□□ -0.57
TRPS1-206ENST00000517323 RPL19P84098 196 aaKnown RBP11.47□□□□□ -0.57
TRPS1-206ENST00000517323 DEFB125Q8N687 156 aa11.47□□□□□ -0.57
TRPS1-206ENST00000517323 C19orf73Q9NVV2 129 aa11.47□□□□□ -0.57
TRPS1-206ENST00000517323 CLEC5AQ9NY25 188 aa11.47□□□□□ -0.57
TRPS1-206ENST00000517323 DNAH3Q8TD57 4116 aa11.47□□□□□ -0.57
TRPS1-206ENST00000517323 SPINK13Q1W4C9 94 aa11.47□□□□□ -0.57
TRPS1-206ENST00000517323 BEAN1Q3B7T3 259 aa11.47□□□□□ -0.57
TRPS1-206ENST00000517323 TMEM183AQ8IXX5 376 aa11.47□□□□□ -0.57
TRPS1-206ENST00000517323 OR11H12B2RN74 326 aa11.46□□□□□ -0.57
TRPS1-206ENST00000517323 KRTAP10-11P60412 298 aa11.46□□□□□ -0.57
TRPS1-206ENST00000517323 RBAKDNA6NC62 111 aa11.45□□□□□ -0.58
TRPS1-206ENST00000517323 GCGP01275 180 aa11.45□□□□□ -0.58
TRPS1-206ENST00000517323 ERVFC1-1P60608 527 aa11.45□□□□□ -0.58
TRPS1-206ENST00000517323 EBLN2Q6P2I7 272 aa11.45□□□□□ -0.58
TRPS1-206ENST00000517323 TMSB15BA0A087X1C1 80 aa11.45□□□□□ -0.58
TRPS1-206ENST00000517323 H3BMM0 161 aa11.45□□□□□ -0.58
TRPS1-206ENST00000517323 NDUFS6O75380 124 aaKnown RBP11.45□□□□□ -0.58
TRPS1-206ENST00000517323 SNAPINO95295 136 aa11.45□□□□□ -0.58
TRPS1-206ENST00000517323 SFRP2Q96HF1 295 aa11.45□□□□□ -0.58
TRPS1-206ENST00000517323 TRAV2A0A0B4J234 112 aa11.44□□□□□ -0.58
TRPS1-206ENST00000517323 PRB2P02812 416 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms