RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ATP5SQ99766 215 aa7.91□□□□□ -1.14
RNF4-216ENST00000511859 NOP10Q9NPE3 64 aaKnown RBP7.91□□□□□ -1.14
RNF4-216ENST00000511859 FNDC10F2Z333 226 aa7.9□□□□□ -1.14
RNF4-216ENST00000511859 VWC2Q2TAL6 325 aa7.9□□□□□ -1.14
RNF4-216ENST00000511859 WDR83OSQ9Y284 106 aa7.9□□□□□ -1.14
RNF4-216ENST00000511859 DNAH8Q96JB1 4490 aa7.9□□□□□ -1.15
RNF4-216ENST00000511859 LRP1Q07954 4544 aaKnown RBP7.89□□□□□ -1.15
RNF4-216ENST00000511859 TRAV12-2A0A075B6T6 113 aa7.89□□□□□ -1.15
RNF4-216ENST00000511859 C1QBP02746 253 aa7.89□□□□□ -1.15
RNF4-216ENST00000511859 DNAH10OSP0CZ25 163 aa7.89□□□□□ -1.15
RNF4-216ENST00000511859 HTN1P15515 57 aa7.89□□□□□ -1.15
RNF4-216ENST00000511859 CXCL2P19875 107 aa7.89□□□□□ -1.15
RNF4-216ENST00000511859 CAMLGP49069 296 aa7.89□□□□□ -1.15
RNF4-216ENST00000511859 MIC13Q5XKP0 118 aa7.89□□□□□ -1.15
RNF4-216ENST00000511859 BAP18Q8IXM2 172 aa7.89□□□□□ -1.15
RNF4-216ENST00000511859 BPIFCQ8NFQ6 507 aa7.89□□□□□ -1.15
RNF4-216ENST00000511859 TMEM263Q8WUH6 116 aaKnown RBP7.89□□□□□ -1.15
RNF4-216ENST00000511859 RSG1Q9BU20 258 aa7.89□□□□□ -1.15
RNF4-216ENST00000511859 TRAV9-2A0A087WT02 112 aa7.88□□□□□ -1.15
RNF4-216ENST00000511859 HMSDA8MTL9 139 aa7.88□□□□□ -1.15
RNF4-216ENST00000511859 FABP1P07148 127 aa7.88□□□□□ -1.15
RNF4-216ENST00000511859 LINC00869P0C866 280 aa7.88□□□□□ -1.15
RNF4-216ENST00000511859 ORM2P19652 201 aa7.88□□□□□ -1.15
RNF4-216ENST00000511859 HOXA5P20719 270 aa7.88□□□□□ -1.15
RNF4-216ENST00000511859 GALR1P47211 349 aa7.88□□□□□ -1.15
RNF4-216ENST00000511859 NKX2-5P52952 324 aaPredicted RBP7.88□□□□□ -1.15
RNF4-216ENST00000511859 HAMPP81172 84 aa7.88□□□□□ -1.15
RNF4-216ENST00000511859 ZFP69Q49AA0 526 aa7.88□□□□□ -1.15
RNF4-216ENST00000511859 RPL7L1Q6DKI1 246 aaKnown RBP7.88□□□□□ -1.15
RNF4-216ENST00000511859 LINC00612Q8N6U2 182 aa7.88□□□□□ -1.15
RNF4-216ENST00000511859 HSD17B11Q8NBQ5 300 aa7.88□□□□□ -1.15
RNF4-216ENST00000511859 OR1B1Q8NGR6 318 aa7.88□□□□□ -1.15
RNF4-216ENST00000511859 SCGB1C1Q8TD33 95 aa7.88□□□□□ -1.15
RNF4-216ENST00000511859 RNASE8Q8TDE3 154 aaKnown RBP7.88□□□□□ -1.15
RNF4-216ENST00000511859 PPP1R14BQ96C90 147 aa7.88□□□□□ -1.15
RNF4-216ENST00000511859 WDR61Q9GZS3 305 aaKnown RBP7.88□□□□□ -1.15
RNF4-216ENST00000511859 SLC45A2Q9UMX9 530 aa7.88□□□□□ -1.15
RNF4-216ENST00000511859 TNFRSF18Q9Y5U5 241 aa7.88□□□□□ -1.15
RNF4-216ENST00000511859 A0A096LPF7 62 aa7.87□□□□□ -1.15
RNF4-216ENST00000511859 ZNF98A6NK75 572 aa7.87□□□□□ -1.15
RNF4-216ENST00000511859 PFDN1O60925 122 aa7.87□□□□□ -1.15
RNF4-216ENST00000511859 RAB31Q13636 194 aa7.87□□□□□ -1.15
RNF4-216ENST00000511859 KCNRGQ8N5I3 272 aa7.87□□□□□ -1.15
RNF4-216ENST00000511859 NPCDR1Q9BY65 106 aa7.87□□□□□ -1.15
RNF4-216ENST00000511859 ARL6Q9H0F7 186 aa7.87□□□□□ -1.15
RNF4-216ENST00000511859 BOLA2-SMG1P6H3BVE0 249 aa7.86□□□□□ -1.15
RNF4-216ENST00000511859 K7EP13 123 aa7.86□□□□□ -1.15
RNF4-216ENST00000511859 OR5G3P0C626 314 aa7.86□□□□□ -1.15
RNF4-216ENST00000511859 SELENOTP62341 195 aa7.86□□□□□ -1.15
RNF4-216ENST00000511859 OPCMLQ14982 345 aa7.86□□□□□ -1.15
RNF4-216ENST00000511859 LGALSLQ3ZCW2 172 aaPredicted RBP7.86□□□□□ -1.15
RNF4-216ENST00000511859 TMUB2Q71RG4 321 aa7.86□□□□□ -1.15
RNF4-216ENST00000511859 HYLS1Q96M11 299 aa7.86□□□□□ -1.15
RNF4-216ENST00000511859 PPP1R14DQ9NXH3 145 aa7.86□□□□□ -1.15
RNF4-216ENST00000511859 PXMP4Q9Y6I8 212 aa7.86□□□□□ -1.15
RNF4-216ENST00000511859 BORCS7-ASMTA0A0B4J1R7 106 aa7.85□□□□□ -1.15
RNF4-216ENST00000511859 A0A0D9SG52 128 aa7.85□□□□□ -1.15
RNF4-216ENST00000511859 H7BYZ3 331 aa7.85□□□□□ -1.15
RNF4-216ENST00000511859 MPDU1O75352 247 aa7.85□□□□□ -1.15
RNF4-216ENST00000511859 CFDP00746 253 aaPredicted RBP7.85□□□□□ -1.15
RNF4-216ENST00000511859 OXTP01178 125 aa7.85□□□□□ -1.15
RNF4-216ENST00000511859 RHOBP62745 196 aa7.85□□□□□ -1.15
RNF4-216ENST00000511859 ZNF345Q14585 488 aa7.85□□□□□ -1.15
RNF4-216ENST00000511859 GCSAMLQ5JQS6 135 aa7.85□□□□□ -1.15
RNF4-216ENST00000511859 PATE2Q6UY27 113 aa7.85□□□□□ -1.15
RNF4-216ENST00000511859 CCDC28AQ8IWP9 274 aa7.85□□□□□ -1.15
RNF4-216ENST00000511859 NTN5Q8WTR8 489 aaPredicted RBP7.85□□□□□ -1.15
RNF4-216ENST00000511859 GPR82Q96P67 336 aa7.85□□□□□ -1.15
RNF4-216ENST00000511859 ARPC5LQ9BPX5 153 aa7.85□□□□□ -1.15
RNF4-216ENST00000511859 SLC25A39Q9BZJ4 359 aaPredicted RBP7.85□□□□□ -1.15
RNF4-216ENST00000511859 SH3BGRL3Q9H299 93 aa7.85□□□□□ -1.15
RNF4-216ENST00000511859 CYTL1Q9NRR1 136 aa7.85□□□□□ -1.15
RNF4-216ENST00000511859 SLC39A9Q9NUM3 307 aa7.85□□□□□ -1.15
RNF4-216ENST00000511859 IGLV5-52A0A0A0MRZ9 124 aa7.84□□□□□ -1.15
RNF4-216ENST00000511859 KANTRA0A1W2PQU2 76 aa7.84□□□□□ -1.15
RNF4-216ENST00000511859 GAGE12BA1L429 117 aa7.84□□□□□ -1.15
RNF4-216ENST00000511859 C17orf112F2Z3M2 114 aa7.84□□□□□ -1.15
RNF4-216ENST00000511859 BCL2L11O43521 198 aa7.84□□□□□ -1.15
RNF4-216ENST00000511859 COX7A2P2O60397 106 aa7.84□□□□□ -1.15
RNF4-216ENST00000511859 HYPMO75409 117 aa7.84□□□□□ -1.15
RNF4-216ENST00000511859 GAGE7O76087 117 aa7.84□□□□□ -1.15
RNF4-216ENST00000511859 NXPH4O95158 308 aa7.84□□□□□ -1.15
RNF4-216ENST00000511859 GAGE12FP0CL80 117 aa7.84□□□□□ -1.15
RNF4-216ENST00000511859 GAGE12GP0CL81 117 aa7.84□□□□□ -1.15
RNF4-216ENST00000511859 GAGE12IP0CL82 117 aa7.84□□□□□ -1.15
RNF4-216ENST00000511859 RPL29P47914 159 aaKnown RBP7.84□□□□□ -1.15
RNF4-216ENST00000511859 ZNF266Q14584 549 aa7.84□□□□□ -1.15
RNF4-216ENST00000511859 FFAR4Q5NUL3 377 aa7.84□□□□□ -1.15
RNF4-216ENST00000511859 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.84□□□□□ -1.15
RNF4-216ENST00000511859 VSIG2Q96IQ7 327 aa7.84□□□□□ -1.15
RNF4-216ENST00000511859 C20orf144Q9BQM9 153 aa7.84□□□□□ -1.15
RNF4-216ENST00000511859 ZNF471Q9BX82 626 aaPredicted RBP7.84□□□□□ -1.15
RNF4-216ENST00000511859 SLC25A22Q9H936 323 aa7.84□□□□□ -1.15
RNF4-216ENST00000511859 HIGD1AQ9Y241 93 aa7.84□□□□□ -1.15
RNF4-216ENST00000511859 FAT3Q8TDW7 4589 aa7.84□□□□□ -1.15
RNF4-216ENST00000511859 TAAR5O14804 337 aa7.84□□□□□ -1.16
RNF4-216ENST00000511859 EIF3GO75821 320 aaKnown RBP eCLIP7.84□□□□□ -1.16
RNF4-216ENST00000511859 ATP6V0CP27449 155 aa7.84□□□□□ -1.16
RNF4-216ENST00000511859 S100A7P31151 101 aa7.84□□□□□ -1.16
RNF4-216ENST00000511859 CDKN1BP46527 198 aa7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms