RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 SHANK2-AS3Q9BTD1 123 aa3.44□□□□□ -1.86
CDH9-203ENST00000505045 PARD6GQ9BYG4 376 aaPredicted RBP3.44□□□□□ -1.86
CDH9-203ENST00000505045 ARL6Q9H0F7 186 aa3.44□□□□□ -1.86
CDH9-203ENST00000505045 C11orf1Q9H5F2 150 aa3.44□□□□□ -1.86
CDH9-203ENST00000505045 GSKIPQ9P0R6 139 aa3.44□□□□□ -1.86
CDH9-203ENST00000505045 DEFB131BA0A096LNP1 70 aa3.44□□□□□ -1.86
CDH9-203ENST00000505045 TRAV10A0A0B4J240 114 aa3.44□□□□□ -1.86
CDH9-203ENST00000505045 A0A0D9SG52 128 aa3.44□□□□□ -1.86
CDH9-203ENST00000505045 PLAC8L1A1L4L8 177 aa3.44□□□□□ -1.86
CDH9-203ENST00000505045 C11orf94C9JXX5 98 aa3.44□□□□□ -1.86
CDH9-203ENST00000505045 K7EPK0 472 aa3.44□□□□□ -1.86
CDH9-203ENST00000505045 FABP1P07148 127 aa3.44□□□□□ -1.86
CDH9-203ENST00000505045 GALR1P47211 349 aa3.44□□□□□ -1.86
CDH9-203ENST00000505045 DLK1P80370 383 aa3.44□□□□□ -1.86
CDH9-203ENST00000505045 PSG9Q00887 426 aa3.44□□□□□ -1.86
CDH9-203ENST00000505045 TMEM37Q8WXS4 190 aa3.44□□□□□ -1.86
CDH9-203ENST00000505045 TMEM147Q9BVK8 224 aa3.44□□□□□ -1.86
CDH9-203ENST00000505045 C1QTNF4Q9BXJ3 329 aa3.44□□□□□ -1.86
CDH9-203ENST00000505045 HIGD1AQ9Y241 93 aa3.44□□□□□ -1.86
CDH9-203ENST00000505045 YTHDF2Q9Y5A9 579 aaKnown RBP3.44□□□□□ -1.86
CDH9-203ENST00000505045 FXYD6-FXYD2A0A087WZ82 144 aa3.43□□□□□ -1.86
CDH9-203ENST00000505045 PIGBOS1A0A0B4J2F0 54 aa3.43□□□□□ -1.86
CDH9-203ENST00000505045 LOC102723971A0A1B0GUV8 181 aa3.43□□□□□ -1.86
CDH9-203ENST00000505045 IGSF23A1L1A6 192 aa3.43□□□□□ -1.86
CDH9-203ENST00000505045 RAB19A4D1S5 217 aa3.43□□□□□ -1.86
CDH9-203ENST00000505045 PRAC2D3DTV9 90 aa3.43□□□□□ -1.86
CDH9-203ENST00000505045 AGPAT2O15120 278 aa3.43□□□□□ -1.86
CDH9-203ENST00000505045 ARPC5O15511 151 aa3.43□□□□□ -1.86
CDH9-203ENST00000505045 CST7O76096 145 aa3.43□□□□□ -1.86
CDH9-203ENST00000505045 SNAPINO95295 136 aa3.43□□□□□ -1.86
CDH9-203ENST00000505045 IFNA21P01568 189 aa3.43□□□□□ -1.86
CDH9-203ENST00000505045 S100A6P06703 90 aa3.43□□□□□ -1.86
CDH9-203ENST00000505045 OR5G3P0C626 314 aa3.43□□□□□ -1.86
CDH9-203ENST00000505045 ID1P41134 155 aa3.43□□□□□ -1.86
CDH9-203ENST00000505045 PLP1P60201 277 aa3.43□□□□□ -1.86
CDH9-203ENST00000505045 NUTF2P61970 127 aaKnown RBP3.43□□□□□ -1.86
CDH9-203ENST00000505045 RPP30P78346 268 aaKnown RBP3.43□□□□□ -1.86
CDH9-203ENST00000505045 ARV1Q9H2C2 271 aa3.43□□□□□ -1.86
CDH9-203ENST00000505045 RPRMQ9NS64 109 aa3.43□□□□□ -1.86
CDH9-203ENST00000505045 MBD2Q9UBB5 411 aa3.43□□□□□ -1.86
CDH9-203ENST00000505045 LSM5Q9Y4Y9 91 aaKnown RBP3.43□□□□□ -1.86
CDH9-203ENST00000505045 MUC4Q99102 2169 aa3.43□□□□□ -1.86
CDH9-203ENST00000505045 A0A087X0K7 114 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 TRAV5A0A0B4J249 113 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 UBE2L5PA0A1B0GUS4 154 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 FAM24AA6NFZ4 105 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 ZNF705GA8MUZ8 300 aaPredicted RBP3.42□□□□□ -1.86
CDH9-203ENST00000505045 H3BQ15 152 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 GOSR2O14653 212 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 GATCO43716 136 aaKnown RBP3.42□□□□□ -1.86
CDH9-203ENST00000505045 HYPMO75409 117 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 SIX6O95475 246 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 RLN2P04090 185 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 HTN3P15516 51 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 AZU1P20160 251 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 PVALBP20472 110 aaPredicted RBP3.42□□□□□ -1.86
CDH9-203ENST00000505045 HIST1H1AQ02539 215 aaPredicted RBP3.42□□□□□ -1.86
CDH9-203ENST00000505045 IL15RAQ13261 267 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 RAB32Q13637 225 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 C10orf91Q5T1B1 145 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 EBLN2Q6P2I7 272 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 LINC00305Q7Z4B0 112 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 SVBPQ8N300 66 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 KCNRGQ8N5I3 272 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 ZNF738Q8NE65 137 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 OR10P1Q8NGE3 313 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 PHYHIPLQ96FC7 376 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 IGF2BP2-AS1Q96M15 143 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 RNF126Q9BV68 326 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 CARHSP1Q9Y2V2 147 aaKnown RBP3.42□□□□□ -1.86
CDH9-203ENST00000505045 RFNGQ9Y644 331 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 LRP1BQ9NZR2 4599 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 HSPG2P98160 4391 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 RYR1P21817 5038 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 IGLV2-18A0A075B6J9 118 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 TMEM218A2RU14 115 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 LINC00587B1AMM8 73 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 FNDC10F2Z333 226 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 M0R2N4 97 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 S100A8P05109 93 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 S100A9P06702 114 aaKnown RBP3.42□□□□□ -1.86
CDH9-203ENST00000505045 SPART-AS1P0CW21 52 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 IGLC2P0DOY2 106 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 RPL7P18124 248 aaKnown RBP3.42□□□□□ -1.86
CDH9-203ENST00000505045 CAV2P51636 162 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 TAS2R30P59541 319 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 S100A10P60903 97 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 GCSAMLQ5JQS6 135 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 MIC13Q5XKP0 118 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 ZNF546Q86UE3 836 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 C12orf45Q8N5I9 185 aaPredicted RBP3.42□□□□□ -1.86
CDH9-203ENST00000505045 OR8A1Q8NGG7 326 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 SFT2D1Q8WV19 159 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 NIPSNAP3BQ9BS92 247 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 NPVFQ9HCQ7 196 aa3.42□□□□□ -1.86
CDH9-203ENST00000505045 ZNF331Q9NQX6 463 aaPredicted RBP3.42□□□□□ -1.86
CDH9-203ENST00000505045 DNAH5Q8TE73 4624 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 ABCA13Q86UQ4 5058 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 A0A1B0GVY2 172 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 KANTRA0A1W2PQU2 76 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms