RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 C9orf47Q6ZRZ4 202 aa11.31□□□□□ -0.6
SGCA-204ENST00000504073 OR8A1Q8NGG7 326 aa11.31□□□□□ -0.6
SGCA-204ENST00000504073 DERL1Q9BUN8 251 aa11.31□□□□□ -0.6
SGCA-204ENST00000504073 SDF2L1Q9HCN8 221 aa11.31□□□□□ -0.6
SGCA-204ENST00000504073 LENEPQ9Y5L5 61 aa11.31□□□□□ -0.6
SGCA-204ENST00000504073 SELENOKQ9Y6D0 94 aa11.31□□□□□ -0.6
SGCA-204ENST00000504073 IGKV2-40A0A087WW87 121 aaPredicted RBP11.3□□□□□ -0.6
SGCA-204ENST00000504073 TRAV34A0A0B4J273 112 aa11.3□□□□□ -0.6
SGCA-204ENST00000504073 ZNF705FA8MVS1 300 aaPredicted RBP11.3□□□□□ -0.6
SGCA-204ENST00000504073 OR11H12B2RN74 326 aa11.3□□□□□ -0.6
SGCA-204ENST00000504073 IGKV2D-40P01614 121 aaPredicted RBP11.3□□□□□ -0.6
SGCA-204ENST00000504073 MGST1P10620 155 aaKnown RBP11.3□□□□□ -0.6
SGCA-204ENST00000504073 ADCYAP1P18509 176 aa11.3□□□□□ -0.6
SGCA-204ENST00000504073 ZNF138P52744 262 aa11.3□□□□□ -0.6
SGCA-204ENST00000504073 HIST1H1AQ02539 215 aaPredicted RBP11.3□□□□□ -0.6
SGCA-204ENST00000504073 RHEBQ15382 184 aa11.3□□□□□ -0.6
SGCA-204ENST00000504073 Q86TA4 180 aa11.3□□□□□ -0.6
SGCA-204ENST00000504073 FAM110AQ9BQ89 295 aa11.3□□□□□ -0.6
SGCA-204ENST00000504073 TRBV7-9A0A0J9YWB2 115 aa11.29□□□□□ -0.6
SGCA-204ENST00000504073 PPP1R2P9O14990 202 aa11.29□□□□□ -0.6
SGCA-204ENST00000504073 LTAP01374 205 aa11.29□□□□□ -0.6
SGCA-204ENST00000504073 MT-ND4LP03901 98 aa11.29□□□□□ -0.6
SGCA-204ENST00000504073 PRR31Q5SQ13 230 aa11.29□□□□□ -0.6
SGCA-204ENST00000504073 GTSCR1Q86UQ5 136 aa11.29□□□□□ -0.6
SGCA-204ENST00000504073 TMEM183AQ8IXX5 376 aa11.29□□□□□ -0.6
SGCA-204ENST00000504073 C15orf54Q8N8G6 183 aa11.29□□□□□ -0.6
SGCA-204ENST00000504073 DAZAP1Q96EP5 407 aaKnown RBP11.29□□□□□ -0.6
SGCA-204ENST00000504073 NOTCH1P46531 2555 aa11.28□□□□□ -0.6
SGCA-204ENST00000504073 NPIPB6E9PJ23 425 aa11.28□□□□□ -0.6
SGCA-204ENST00000504073 TSPOP30536 169 aa11.28□□□□□ -0.6
SGCA-204ENST00000504073 DEFB131AP59861 70 aa11.28□□□□□ -0.6
SGCA-204ENST00000504073 CLRN3Q8NCR9 226 aa11.28□□□□□ -0.6
SGCA-204ENST00000504073 C20orf173Q96LM9 149 aa11.28□□□□□ -0.6
SGCA-204ENST00000504073 IGF2BP2-AS1Q96M15 143 aa11.28□□□□□ -0.6
SGCA-204ENST00000504073 LINC00479Q96M42 142 aa11.28□□□□□ -0.6
SGCA-204ENST00000504073 TRRAPQ9Y4A5 3859 aa11.28□□□□□ -0.6
SGCA-204ENST00000504073 TRAV8-1A0A0A6YYK1 113 aa11.27□□□□□ -0.61
SGCA-204ENST00000504073 LEPP41159 167 aa11.27□□□□□ -0.61
SGCA-204ENST00000504073 RPL23P62829 140 aaKnown RBP11.27□□□□□ -0.61
SGCA-204ENST00000504073 SMUG1Q53HV7 270 aa11.27□□□□□ -0.61
SGCA-204ENST00000504073 LINC01551Q86U37 167 aa11.27□□□□□ -0.61
SGCA-204ENST00000504073 OCC1Q8TAD7 63 aa11.27□□□□□ -0.61
SGCA-204ENST00000504073 ANAPC16Q96DE5 110 aa11.27□□□□□ -0.61
SGCA-204ENST00000504073 SGK494Q96LW2 274 aa11.27□□□□□ -0.61
SGCA-204ENST00000504073 ODF3Q96PU9 254 aa11.27□□□□□ -0.61
SGCA-204ENST00000504073 SAV1Q9H4B6 383 aaPredicted RBP11.27□□□□□ -0.61
SGCA-204ENST00000504073 MAP6D1Q9H9H5 199 aa11.27□□□□□ -0.61
SGCA-204ENST00000504073 ZNF492Q9P255 531 aa11.27□□□□□ -0.61
SGCA-204ENST00000504073 ZNF256Q9Y2P7 627 aaPredicted RBP11.27□□□□□ -0.61
SGCA-204ENST00000504073 PRKDCP78527 4128 aaKnown RBP11.27□□□□□ -0.61
SGCA-204ENST00000504073 A0A0J9YX75 114 aa11.26□□□□□ -0.61
SGCA-204ENST00000504073 PRR25Q96S07 402 aa11.26□□□□□ -0.61
SGCA-204ENST00000504073 VGLL1Q99990 258 aa11.26□□□□□ -0.61
SGCA-204ENST00000504073 CTDSP1Q9GZU7 261 aa11.26□□□□□ -0.61
SGCA-204ENST00000504073 AGPAT4-IT1Q9H0P7 198 aa11.26□□□□□ -0.61
SGCA-204ENST00000504073 IZUMO1RA6ND01 250 aa11.25□□□□□ -0.61
SGCA-204ENST00000504073 PRAC2D3DTV9 90 aa11.25□□□□□ -0.61
SGCA-204ENST00000504073 GCGP01275 180 aa11.25□□□□□ -0.61
SGCA-204ENST00000504073 IGLV2-11P01706 119 aa11.25□□□□□ -0.61
SGCA-204ENST00000504073 ERVFC1-1P60608 527 aa11.25□□□□□ -0.61
SGCA-204ENST00000504073 BEAN1Q3B7T3 259 aa11.25□□□□□ -0.61
SGCA-204ENST00000504073 STHQ8IWL8 128 aa11.25□□□□□ -0.61
SGCA-204ENST00000504073 OR4B1Q8NGF8 309 aa11.25□□□□□ -0.61
SGCA-204ENST00000504073 ASCL2Q99929 193 aa11.25□□□□□ -0.61
SGCA-204ENST00000504073 RPS10P5Q9NQ39 176 aa11.25□□□□□ -0.61
SGCA-204ENST00000504073 NBEAL2Q6ZNJ1 2754 aa11.25□□□□□ -0.61
SGCA-204ENST00000504073 TRBV20OR9-2A0A075B6H5 130 aa11.24□□□□□ -0.61
SGCA-204ENST00000504073 A0A087WWC5 75 aa11.24□□□□□ -0.61
SGCA-204ENST00000504073 HLA-DRB4P13762 266 aa11.24□□□□□ -0.61
SGCA-204ENST00000504073 NUTF2P61970 127 aaKnown RBP11.24□□□□□ -0.61
SGCA-204ENST00000504073 ERCC8Q13216 396 aa11.24□□□□□ -0.61
SGCA-204ENST00000504073 FAM24BQ8N5W8 94 aa11.24□□□□□ -0.61
SGCA-204ENST00000504073 OR10G8Q8NGN5 311 aa11.24□□□□□ -0.61
SGCA-204ENST00000504073 ISOC2Q96AB3 205 aa11.24□□□□□ -0.61
SGCA-204ENST00000504073 HLA-DRB4X5D2U9 266 aa11.24□□□□□ -0.61
SGCA-204ENST00000504073 XKRY2A2RUG3 117 aa11.23□□□□□ -0.61
SGCA-204ENST00000504073 C7orf77A4D0Y5 90 aa11.23□□□□□ -0.61
SGCA-204ENST00000504073 H7BYZ3 331 aa11.23□□□□□ -0.61
SGCA-204ENST00000504073 AMBPP02760 352 aa11.23□□□□□ -0.61
SGCA-204ENST00000504073 GPX1P07203 203 aa11.23□□□□□ -0.61
SGCA-204ENST00000504073 IGLL1P15814 213 aa11.23□□□□□ -0.61
SGCA-204ENST00000504073 ACTL10Q5JWF8 245 aa11.23□□□□□ -0.61
SGCA-204ENST00000504073 IBA57Q5T440 356 aaKnown RBP11.23□□□□□ -0.61
SGCA-204ENST00000504073 FAM162BQ5T6X4 162 aa11.23□□□□□ -0.61
SGCA-204ENST00000504073 PRR27Q6MZM9 219 aa11.23□□□□□ -0.61
SGCA-204ENST00000504073 NHLRC2Q8NBF2 726 aa11.23□□□□□ -0.61
SGCA-204ENST00000504073 Q8TAT8 98 aa11.23□□□□□ -0.61
SGCA-204ENST00000504073 SFRP2Q96HF1 295 aa11.23□□□□□ -0.61
SGCA-204ENST00000504073 CLUHP3Q96NS8 147 aa11.23□□□□□ -0.61
SGCA-204ENST00000504073 MLST8Q9BVC4 326 aa11.23□□□□□ -0.61
SGCA-204ENST00000504073 OSTCQ9NRP0 149 aa11.23□□□□□ -0.61
SGCA-204ENST00000504073 PGPEP1LA6NFU8 196 aa11.22□□□□□ -0.61
SGCA-204ENST00000504073 F6UB75 175 aa11.22□□□□□ -0.61
SGCA-204ENST00000504073 P01737 135 aa11.22□□□□□ -0.61
SGCA-204ENST00000504073 S100PP25815 95 aa11.22□□□□□ -0.61
SGCA-204ENST00000504073 RPL19P84098 196 aaKnown RBP11.22□□□□□ -0.61
SGCA-204ENST00000504073 FAM231DQ6ZW35 169 aa11.22□□□□□ -0.61
SGCA-204ENST00000504073 COX8CQ7Z4L0 72 aa11.22□□□□□ -0.61
SGCA-204ENST00000504073 TMEM242Q9NWH2 141 aa11.22□□□□□ -0.61
SGCA-204ENST00000504073 FABP5P3A8MUU1 101 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms