RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 F8VRH5 84 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 NXPH4O95158 308 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 NDUFA3O95167 84 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 LGALS1P09382 135 aaKnown RBP2.22□□□□□ -2.05
NEDD4-204ENST00000503468 SRSF9Q13242 221 aaKnown RBP eCLIP2.22□□□□□ -2.05
NEDD4-204ENST00000503468 PIGYQ3MUY2 71 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 ORMDL2Q53FV1 153 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 C10orf126Q8N4M7 172 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 LINC00612Q8N6U2 182 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 TMEM105Q8N8V8 129 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 TMEM178AQ8NBL3 297 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 AAMDCQ9H7C9 122 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 CRIM1Q9NZV1 1036 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 DNAH6Q9C0G6 4158 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 PRSS29PA6NIE9 313 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 ODF3BA8MYP8 253 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 F2Z2F3 143 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 M0R2P5 195 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 MRPS12O15235 138 aaKnown RBP2.22□□□□□ -2.05
NEDD4-204ENST00000503468 ACTL6BO94805 426 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 CELA3AP09093 270 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 MYF5P13349 255 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 LIFP15018 202 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 UCNP55089 124 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 SCGB1D4Q6XE38 83 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 ACP7Q6ZNF0 438 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 PRSS33Q8NF86 280 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 C20orf78Q9BR46 151 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 RNASE7Q9H1E1 156 aaKnown RBP2.22□□□□□ -2.05
NEDD4-204ENST00000503468 FOXA2Q9Y261 457 aaPredicted RBP2.22□□□□□ -2.05
NEDD4-204ENST00000503468 TRAV8-2A0A0B4J237 113 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 IGKV1-6A0A0C4DH72 117 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 ATOX1O00244 68 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 SPRY1O43609 319 aaPredicted RBP2.22□□□□□ -2.05
NEDD4-204ENST00000503468 SPINK4O60575 86 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 STATHP02808 62 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 PF4V1P10720 104 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 PRCDQ00LT1 54 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 GAGE2AQ6NT46 116 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 WFDC8Q8IUA0 241 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 SBSPONQ8IVN8 264 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 TMEM116Q8NCL8 245 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 ZNF488Q96MN9 340 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 IGHV3OR15-7A0A075B7D8 119 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 IGHV1-69DA0A0B4J2H0 117 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 C15orf61A6NNL5 157 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 SRRM5B3KS81 715 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 SNAI2O43623 268 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 MOSP00540 346 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 IGKCP01834 107 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 CELA3BP08861 270 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 SLC25A16P16260 332 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 MEOX1P50221 254 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 UBE2D1P51668 147 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 DSCR4P56555 118 aaPredicted RBP2.21□□□□□ -2.06
NEDD4-204ENST00000503468 TMEM258P61165 79 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 KRTAP1-1Q07627 177 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 FAM104BQ5XKR9 115 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 SSMEM1Q8WWF3 244 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 MRPL20Q9BYC9 149 aaKnown RBP2.21□□□□□ -2.06
NEDD4-204ENST00000503468 OR2H1Q9GZK4 316 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 LOC107984156A0A0G2JMH3 177 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 A0A1W2PP55 124 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 SMIM9A6NGZ8 99 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 HRKO00198 91 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 NCR2O95944 276 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 GATA2P23769 480 aaPredicted RBP2.21□□□□□ -2.06
NEDD4-204ENST00000503468 CKS2P33552 79 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 ZNF497Q6ZNH5 498 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 LINC00643Q86TS7 51 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 ARL17AQ8IVW1 177 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 CEND1Q8N111 149 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 OR8A1Q8NGG7 326 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 GPHA2Q96T91 129 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 VPS13DQ5THJ4 4388 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 TRAV12-1A0A0B4J245 112 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 C19orf71A6NCJ1 209 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 TCRAP04437 139 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 LOXL3P58215 753 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 FXYD3Q14802 87 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 MEIG1Q5JSS6 88 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 S100A7L2Q5SY68 101 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 TMEM170BQ5T4T1 132 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 KPRPQ5T749 579 aaPredicted RBP2.21□□□□□ -2.06
NEDD4-204ENST00000503468 C10orf113Q5VZT2 155 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 UBALD1Q8TB05 177 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 PKDREJQ9NTG1 2253 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 LOC400499M0QZD8 3231 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 K7EN84 100 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 TIMM23O14925 209 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 DUX1O43812 170 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 DUTP33316 252 aaKnown RBP2.21□□□□□ -2.06
NEDD4-204ENST00000503468 SRSF2Q01130 221 aaKnown RBP2.21□□□□□ -2.06
NEDD4-204ENST00000503468 C9orf153Q5TBE3 101 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 HCP5Q6MZN7 132 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 LINC00322Q6ZN03 302 aaPredicted RBP2.21□□□□□ -2.06
NEDD4-204ENST00000503468 OR13A1Q8NGR1 328 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 CT55Q8WUE5 264 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 PIMREGQ9BSJ6 248 aa2.21□□□□□ -2.06
NEDD4-204ENST00000503468 MDFICQ9P1T7 246 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms