RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 UNQ9165/PRO28630Q6UXU0 137 aa3.12□□□□□ -1.91
NIPBL-203ENST00000503274 ARRDC1Q8N5I2 433 aa3.12□□□□□ -1.91
NIPBL-203ENST00000503274 HSD17B11Q8NBQ5 300 aa3.12□□□□□ -1.91
NIPBL-203ENST00000503274 AP3S1Q92572 193 aa3.12□□□□□ -1.91
NIPBL-203ENST00000503274 SLC25A46Q96AG3 418 aa3.12□□□□□ -1.91
NIPBL-203ENST00000503274 PDCD10Q9BUL8 212 aa3.12□□□□□ -1.91
NIPBL-203ENST00000503274 WFDC10AQ9H1F0 79 aa3.12□□□□□ -1.91
NIPBL-203ENST00000503274 ENY2Q9NPA8 101 aa3.12□□□□□ -1.91
NIPBL-203ENST00000503274 TMEM14BQ9NUH8 114 aa3.12□□□□□ -1.91
NIPBL-203ENST00000503274 SMPXQ9UHP9 88 aa3.12□□□□□ -1.91
NIPBL-203ENST00000503274 IGHV3-21A0A0B4J1V1 117 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 IGHV7-4-1A0A0J9YVY3 117 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 FAM25AB3EWG3 89 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 FAM25CB3EWG5 89 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 FAM25GB3EWG6 89 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 K7EIM0 57 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 CORTO00230 105 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 LY6G6CO95867 125 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 IFNA17P01571 189 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 CTSDP07339 412 aaPredicted RBP3.11□□□□□ -1.91
NIPBL-203ENST00000503274 CTSGP08311 255 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 AKR1C2P52895 323 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 NUTF2P61970 127 aaKnown RBP3.11□□□□□ -1.91
NIPBL-203ENST00000503274 LSM3P62310 102 aaKnown RBP3.11□□□□□ -1.91
NIPBL-203ENST00000503274 PRCDQ00LT1 54 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 SYCNQ0VAF6 134 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 CLINT1Q14677 625 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 DEFB135Q30KP9 77 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 RNASE10Q5GAN6 216 aaKnown RBP3.11□□□□□ -1.91
NIPBL-203ENST00000503274 CEMP1Q6PRD7 247 aaPredicted RBP3.11□□□□□ -1.91
NIPBL-203ENST00000503274 TEX43Q6ZNM6 134 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 LYG2Q86SG7 212 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 SNX29P2Q8IUI4 249 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 SLC35G3Q8N808 338 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 RNASE11Q8TAA1 199 aaKnown RBP3.11□□□□□ -1.91
NIPBL-203ENST00000503274 ZFAND1Q8TCF1 268 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 GPX8Q8TED1 209 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 RHPN1-AS1Q9BWJ2 59 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 NXF2Q9GZY0 626 aaKnown RBP3.11□□□□□ -1.91
NIPBL-203ENST00000503274 COPZ2Q9P299 210 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 COMMD3Q9UBI1 195 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 CACFD1Q9UGQ2 172 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 ANAPC10Q9UM13 185 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 RFNGQ9Y644 331 aa3.11□□□□□ -1.91
NIPBL-203ENST00000503274 EPPK1P58107 5090 aaKnown RBP3.11□□□□□ -1.91
NIPBL-203ENST00000503274 IGKV3-7A0A075B6H7 116 aa3.1□□□□□ -1.91
NIPBL-203ENST00000503274 IGHV3OR16-8A0A075B7F1 116 aa3.1□□□□□ -1.91
NIPBL-203ENST00000503274 TRAV30A0A087WSZ9 112 aa3.1□□□□□ -1.91
NIPBL-203ENST00000503274 TRAV2A0A0B4J234 112 aa3.1□□□□□ -1.91
NIPBL-203ENST00000503274 PIGBOS1A0A0B4J2F0 54 aa3.1□□□□□ -1.91
NIPBL-203ENST00000503274 FAM240BA0A1B0GVZ2 78 aa3.1□□□□□ -1.91
NIPBL-203ENST00000503274 I3L2K1 104 aa3.1□□□□□ -1.91
NIPBL-203ENST00000503274 ZNF207O43670 478 aaKnown RBP3.1□□□□□ -1.91
NIPBL-203ENST00000503274 MT-CO2P00403 227 aa3.1□□□□□ -1.91
NIPBL-203ENST00000503274 NPPCP23582 126 aa3.1□□□□□ -1.91
NIPBL-203ENST00000503274 AP2S1P53680 142 aaPredicted RBP3.1□□□□□ -1.91
NIPBL-203ENST00000503274 TCTAP57738 103 aa3.1□□□□□ -1.91
NIPBL-203ENST00000503274 TCF24Q7RTU0 167 aa3.1□□□□□ -1.91
NIPBL-203ENST00000503274 TMEM230Q96A57 120 aa3.1□□□□□ -1.91
NIPBL-203ENST00000503274 MRGPRFQ96AM1 343 aa3.1□□□□□ -1.91
NIPBL-203ENST00000503274 OR10C1Q96KK4 312 aa3.1□□□□□ -1.91
NIPBL-203ENST00000503274 METTL26Q96S19 204 aa3.1□□□□□ -1.91
NIPBL-203ENST00000503274 FXYD6Q9H0Q3 95 aa3.1□□□□□ -1.91
NIPBL-203ENST00000503274 BIRC6Q9NR09 4857 aa3.1□□□□□ -1.91
NIPBL-203ENST00000503274 HYDINQ4G0P3 5121 aa3.1□□□□□ -1.91
NIPBL-203ENST00000503274 DNAH10Q8IVF4 4471 aa3.1□□□□□ -1.91
NIPBL-203ENST00000503274 VPS13DQ5THJ4 4388 aa3.09□□□□□ -1.91
NIPBL-203ENST00000503274 KMT2AQ03164 3969 aa3.09□□□□□ -1.91
NIPBL-203ENST00000503274 C3orf85A0A1B0GTC6 90 aa3.09□□□□□ -1.91
NIPBL-203ENST00000503274 C7orf66A4D0T2 115 aa3.09□□□□□ -1.91
NIPBL-203ENST00000503274 OPRK1P41145 380 aa3.09□□□□□ -1.91
NIPBL-203ENST00000503274 HTR2BP41595 481 aa3.09□□□□□ -1.91
NIPBL-203ENST00000503274 RPL5P46777 297 aaKnown RBP3.09□□□□□ -1.91
NIPBL-203ENST00000503274 PIGPP57054 158 aa3.09□□□□□ -1.91
NIPBL-203ENST00000503274 SPCS3P61009 180 aa3.09□□□□□ -1.91
NIPBL-203ENST00000503274 MRPS10P82664 201 aaKnown RBP3.09□□□□□ -1.91
NIPBL-203ENST00000503274 SSBP1Q04837 148 aaKnown RBP3.09□□□□□ -1.91
NIPBL-203ENST00000503274 SCGB2B2Q4G0G5 96 aa3.09□□□□□ -1.91
NIPBL-203ENST00000503274 SLC25A34Q6PIV7 304 aa3.09□□□□□ -1.91
NIPBL-203ENST00000503274 TOMM20LQ6UXN7 152 aa3.09□□□□□ -1.91
NIPBL-203ENST00000503274 NTM-AS1Q6ZSK4 140 aa3.09□□□□□ -1.91
NIPBL-203ENST00000503274 APRG1Q8IVJ8 170 aa3.09□□□□□ -1.91
NIPBL-203ENST00000503274 OR11H2Q8NH07 326 aa3.09□□□□□ -1.91
NIPBL-203ENST00000503274 TERB2Q8NHR7 220 aa3.09□□□□□ -1.91
NIPBL-203ENST00000503274 Q8WTZ3 238 aa3.09□□□□□ -1.91
NIPBL-203ENST00000503274 YIPF6Q96EC8 236 aa3.09□□□□□ -1.91
NIPBL-203ENST00000503274 SCGB3A2Q96PL1 93 aa3.09□□□□□ -1.91
NIPBL-203ENST00000503274 SLC25A2Q9BXI2 301 aa3.09□□□□□ -1.91
NIPBL-203ENST00000503274 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.09□□□□□ -1.91
NIPBL-203ENST00000503274 RABL2AQ9UBK7 228 aaPredicted RBP3.09□□□□□ -1.91
NIPBL-203ENST00000503274 RABAC1Q9UI14 185 aa3.09□□□□□ -1.91
NIPBL-203ENST00000503274 RABL2BQ9UNT1 228 aa3.09□□□□□ -1.91
NIPBL-203ENST00000503274 C14orf166Q9Y224 244 aaKnown RBP3.09□□□□□ -1.91
NIPBL-203ENST00000503274 PUS1Q9Y606 427 aaKnown RBP eCLIP3.09□□□□□ -1.91
NIPBL-203ENST00000503274 FRAS1Q86XX4 4008 aa3.09□□□□□ -1.92
NIPBL-203ENST00000503274 IGLV1-50A0A075B6I6 118 aa3.08□□□□□ -1.92
NIPBL-203ENST00000503274 IGHV3-49A0A0A0MS15 119 aa3.08□□□□□ -1.92
NIPBL-203ENST00000503274 DISC1C4P0D8 188 aa3.08□□□□□ -1.92
NIPBL-203ENST00000503274 F6UB75 175 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 249.3 ms