RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 EIF4E3Q8N5X7 224 aaKnown RBP13.49□□□□□ -0.25
RGP1-202ENST00000496906 SGK494Q96LW2 274 aa13.49□□□□□ -0.25
RGP1-202ENST00000496906 DERL1Q9BUN8 251 aa13.49□□□□□ -0.25
RGP1-202ENST00000496906 AGPAT4-IT1Q9H0P7 198 aa13.49□□□□□ -0.25
RGP1-202ENST00000496906 KLF12Q9Y4X4 402 aa13.49□□□□□ -0.25
RGP1-202ENST00000496906 A8MTW9 85 aa13.49□□□□□ -0.25
RGP1-202ENST00000496906 UQCC3Q6UW78 93 aa13.49□□□□□ -0.25
RGP1-202ENST00000496906 STHQ8IWL8 128 aa13.49□□□□□ -0.25
RGP1-202ENST00000496906 LINC00477Q96M19 166 aa13.49□□□□□ -0.25
RGP1-202ENST00000496906 TREM1Q9NP99 234 aa13.49□□□□□ -0.25
RGP1-202ENST00000496906 AGRNO00468 2067 aa13.48□□□□□ -0.25
RGP1-202ENST00000496906 RPL35P42766 123 aaKnown RBP13.48□□□□□ -0.25
RGP1-202ENST00000496906 TMEM183BQ1AE95 376 aa13.48□□□□□ -0.25
RGP1-202ENST00000496906 TMEM78Q5T7P6 136 aa13.48□□□□□ -0.25
RGP1-202ENST00000496906 TRPT1Q86TN4 253 aaKnown RBP13.48□□□□□ -0.25
RGP1-202ENST00000496906 OR4B1Q8NGF8 309 aa13.48□□□□□ -0.25
RGP1-202ENST00000496906 FMC1Q96HJ9 113 aa13.48□□□□□ -0.25
RGP1-202ENST00000496906 SLC35B3Q9H1N7 401 aa13.48□□□□□ -0.25
RGP1-202ENST00000496906 SRD5A3Q9H8P0 318 aa13.48□□□□□ -0.25
RGP1-202ENST00000496906 FBLL1A6NHQ2 334 aaKnown RBP13.47□□□□□ -0.25
RGP1-202ENST00000496906 CT45A10P0DMU9 189 aa13.47□□□□□ -0.25
RGP1-202ENST00000496906 UBE2G1P62253 170 aa13.47□□□□□ -0.25
RGP1-202ENST00000496906 FLI1Q01543 452 aaPredicted RBP13.47□□□□□ -0.25
RGP1-202ENST00000496906 Q8TAT8 98 aa13.47□□□□□ -0.25
RGP1-202ENST00000496906 CLUHP3Q96NS8 147 aa13.47□□□□□ -0.25
RGP1-202ENST00000496906 PARLQ9H300 379 aa13.47□□□□□ -0.25
RGP1-202ENST00000496906 PPP1R14DQ9NXH3 145 aa13.47□□□□□ -0.25
RGP1-202ENST00000496906 ZNF492Q9P255 531 aa13.47□□□□□ -0.25
RGP1-202ENST00000496906 PSG8Q9UQ74 426 aa13.47□□□□□ -0.25
RGP1-202ENST00000496906 TRBV6-1A0A0K0K1D8 114 aa13.46□□□□□ -0.25
RGP1-202ENST00000496906 RBMY1BA6NDE4 496 aaKnown RBP13.46□□□□□ -0.25
RGP1-202ENST00000496906 RBMY1EA6NEQ0 496 aaKnown RBP13.46□□□□□ -0.25
RGP1-202ENST00000496906 IGKV3-20P01619 116 aa13.46□□□□□ -0.25
RGP1-202ENST00000496906 RBMY1DP0C7P1 496 aaKnown RBP13.46□□□□□ -0.25
RGP1-202ENST00000496906 ZNF138P52744 262 aa13.46□□□□□ -0.25
RGP1-202ENST00000496906 CEBPGP53567 150 aa13.46□□□□□ -0.25
RGP1-202ENST00000496906 AMTNQ6UX39 209 aa13.46□□□□□ -0.25
RGP1-202ENST00000496906 Q86TA4 180 aa13.46□□□□□ -0.25
RGP1-202ENST00000496906 S100A9P06702 114 aaKnown RBP13.45□□□□□ -0.26
RGP1-202ENST00000496906 FAM19A4Q96LR4 140 aa13.45□□□□□ -0.26
RGP1-202ENST00000496906 ASCL2Q99929 193 aa13.45□□□□□ -0.26
RGP1-202ENST00000496906 AURKAIP1Q9NWT8 199 aaPredicted RBP13.45□□□□□ -0.26
RGP1-202ENST00000496906 IGHV4-30-4P0DP06 118 aa13.45□□□□□ -0.26
RGP1-202ENST00000496906 TAS2R60P59551 318 aa13.45□□□□□ -0.26
RGP1-202ENST00000496906 PRNTQ86SH4 94 aa13.45□□□□□ -0.26
RGP1-202ENST00000496906 TVP23CQ96ET8 276 aa13.45□□□□□ -0.26
RGP1-202ENST00000496906 ODF3Q96PU9 254 aa13.45□□□□□ -0.26
RGP1-202ENST00000496906 LTAP01374 205 aa13.44□□□□□ -0.26
RGP1-202ENST00000496906 PRB2P02812 416 aaPredicted RBP13.44□□□□□ -0.26
RGP1-202ENST00000496906 SFTA3P0C7M3 94 aa13.44□□□□□ -0.26
RGP1-202ENST00000496906 ZNF674Q2M3X9 581 aa13.44□□□□□ -0.26
RGP1-202ENST00000496906 IGF2BP2-AS1Q96M15 143 aa13.44□□□□□ -0.26
RGP1-202ENST00000496906 LENEPQ9Y5L5 61 aa13.44□□□□□ -0.26
RGP1-202ENST00000496906 TRBV20OR9-2A0A075B6H5 130 aa13.43□□□□□ -0.26
RGP1-202ENST00000496906 TRBV7-9A0A0J9YWB2 115 aa13.43□□□□□ -0.26
RGP1-202ENST00000496906 RPL35AP18077 110 aaKnown RBP13.43□□□□□ -0.26
RGP1-202ENST00000496906 NDUFA5Q16718 116 aa13.43□□□□□ -0.26
RGP1-202ENST00000496906 A8MZ25 164 aa13.42□□□□□ -0.26
RGP1-202ENST00000496906 CENPWQ5EE01 88 aa13.42□□□□□ -0.26
RGP1-202ENST00000496906 SMIM7Q9BQ49 75 aa13.42□□□□□ -0.26
RGP1-202ENST00000496906 TUBA4BQ9H853 241 aa13.42□□□□□ -0.26
RGP1-202ENST00000496906 ZFP30Q9Y2G7 519 aa13.42□□□□□ -0.26
RGP1-202ENST00000496906 C9JCJ5 164 aa13.41□□□□□ -0.26
RGP1-202ENST00000496906 CRISP2P16562 243 aa13.41□□□□□ -0.26
RGP1-202ENST00000496906 SOHLH1Q5JUK2 328 aa13.41□□□□□ -0.26
RGP1-202ENST00000496906 BAGE2Q86Y30 109 aa13.41□□□□□ -0.26
RGP1-202ENST00000496906 SLC7A5P1Q8MH63 180 aa13.41□□□□□ -0.26
RGP1-202ENST00000496906 ZFAND2AQ8N6M9 145 aa13.41□□□□□ -0.26
RGP1-202ENST00000496906 NDFIP1Q9BT67 221 aa13.41□□□□□ -0.26
RGP1-202ENST00000496906 LOC102724200A0A096LPH7 203 aaPredicted RBP13.41□□□□□ -0.26
RGP1-202ENST00000496906 TMEM218A2RU14 115 aa13.41□□□□□ -0.26
RGP1-202ENST00000496906 ZNF727A8MUV8 499 aa13.41□□□□□ -0.26
RGP1-202ENST00000496906 K7EIL1 84 aa13.41□□□□□ -0.26
RGP1-202ENST00000496906 M0R2Z0 102 aa13.41□□□□□ -0.26
RGP1-202ENST00000496906 LEPP41159 167 aa13.41□□□□□ -0.26
RGP1-202ENST00000496906 GNG4P50150 75 aa13.41□□□□□ -0.26
RGP1-202ENST00000496906 SPINK13Q1W4C9 94 aa13.41□□□□□ -0.26
RGP1-202ENST00000496906 SAPCD1Q5SSQ6 148 aa13.41□□□□□ -0.26
RGP1-202ENST00000496906 C8orf49Q96NF6 230 aa13.41□□□□□ -0.26
RGP1-202ENST00000496906 TSPOP30536 169 aa13.4□□□□□ -0.26
RGP1-202ENST00000496906 CDKN1BP46527 198 aa13.4□□□□□ -0.26
RGP1-202ENST00000496906 FXYD7P58549 80 aa13.4□□□□□ -0.26
RGP1-202ENST00000496906 NUTF2P61970 127 aaKnown RBP13.4□□□□□ -0.26
RGP1-202ENST00000496906 FAM74A3Q4VXF1 159 aa13.4□□□□□ -0.26
RGP1-202ENST00000496906 MORN3Q6PF18 240 aaPredicted RBP13.4□□□□□ -0.26
RGP1-202ENST00000496906 LINC00322Q6ZN03 302 aaPredicted RBP13.4□□□□□ -0.26
RGP1-202ENST00000496906 TMEM183AQ8IXX5 376 aa13.4□□□□□ -0.26
RGP1-202ENST00000496906 NHLRC2Q8NBF2 726 aa13.4□□□□□ -0.26
RGP1-202ENST00000496906 MLST8Q9BVC4 326 aa13.4□□□□□ -0.26
RGP1-202ENST00000496906 PGPEP1LA6NFU8 196 aa13.39□□□□□ -0.27
RGP1-202ENST00000496906 KLLNB2CW77 178 aa13.39□□□□□ -0.27
RGP1-202ENST00000496906 IGLV2-8P01709 118 aa13.39□□□□□ -0.27
RGP1-202ENST00000496906 KIR3DS1Q14943 382 aa13.39□□□□□ -0.27
RGP1-202ENST00000496906 COX8CQ7Z4L0 72 aa13.39□□□□□ -0.27
RGP1-202ENST00000496906 SMIM12Q96EX1 92 aa13.39□□□□□ -0.27
RGP1-202ENST00000496906 J3KRW8 73 aa13.38□□□□□ -0.27
RGP1-202ENST00000496906 GIG44P09565 113 aaPredicted RBP13.38□□□□□ -0.27
RGP1-202ENST00000496906 ADCYAP1P18509 176 aa13.38□□□□□ -0.27
RGP1-202ENST00000496906 PRR9Q5T870 116 aa13.38□□□□□ -0.27
RGP1-202ENST00000496906 TRAV12-2A0A075B6T6 113 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms