RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 TMEM78Q5T7P6 136 aa16.01■□□□□ 0.15
C9orf3-222ENST00000496567 MORN3Q6PF18 240 aaPredicted RBP16.01■□□□□ 0.15
C9orf3-222ENST00000496567 C9orf47Q6ZRZ4 202 aa16.01■□□□□ 0.15
C9orf3-222ENST00000496567 KIR2DL5AQ8N109 375 aa16.01■□□□□ 0.15
C9orf3-222ENST00000496567 KIR2DL5BQ8NHK3 375 aa16.01■□□□□ 0.15
C9orf3-222ENST00000496567 VAX2Q9UIW0 290 aa16.01■□□□□ 0.15
C9orf3-222ENST00000496567 MEF2BQ02080 365 aaPredicted RBP16■□□□□ 0.15
C9orf3-222ENST00000496567 CYB561D1Q8N8Q1 229 aa16■□□□□ 0.15
C9orf3-222ENST00000496567 VGLL1Q99990 258 aa16■□□□□ 0.15
C9orf3-222ENST00000496567 RBFOX3A6NFN3 312 aa16■□□□□ 0.15
C9orf3-222ENST00000496567 PEX7O00628 323 aa16■□□□□ 0.15
C9orf3-222ENST00000496567 ERCC8Q13216 396 aa16■□□□□ 0.15
C9orf3-222ENST00000496567 FAM210AQ96ND0 272 aa16■□□□□ 0.15
C9orf3-222ENST00000496567 AGPAT4-IT1Q9H0P7 198 aa16■□□□□ 0.15
C9orf3-222ENST00000496567 CSTL1Q9H114 145 aa16■□□□□ 0.15
C9orf3-222ENST00000496567 RAB19A4D1S5 217 aa15.99■□□□□ 0.15
C9orf3-222ENST00000496567 SRSF3P84103 164 aaKnown RBP15.99■□□□□ 0.15
C9orf3-222ENST00000496567 LOC102723971A0A1B0GUV8 181 aa15.98■□□□□ 0.15
C9orf3-222ENST00000496567 AMTNQ6UX39 209 aa15.98■□□□□ 0.15
C9orf3-222ENST00000496567 ODF3Q96PU9 254 aa15.98■□□□□ 0.15
C9orf3-222ENST00000496567 FBLL1A6NHQ2 334 aaKnown RBP15.97■□□□□ 0.15
C9orf3-222ENST00000496567 PDE6DO43924 150 aa15.97■□□□□ 0.15
C9orf3-222ENST00000496567 ATP6V1G1O75348 118 aa15.97■□□□□ 0.15
C9orf3-222ENST00000496567 ZNF138P52744 262 aa15.97■□□□□ 0.15
C9orf3-222ENST00000496567 TOR2AQ5JU69 321 aa15.97■□□□□ 0.15
C9orf3-222ENST00000496567 EIF4E3Q8N5X7 224 aaKnown RBP15.97■□□□□ 0.15
C9orf3-222ENST00000496567 MEGF8Q7Z7M0 2845 aa15.97■□□□□ 0.15
C9orf3-222ENST00000496567 UBE2CO00762 179 aa15.96■□□□□ 0.15
C9orf3-222ENST00000496567 CT45A10P0DMU9 189 aa15.96■□□□□ 0.15
C9orf3-222ENST00000496567 TSPOP30536 169 aa15.96■□□□□ 0.15
C9orf3-222ENST00000496567 ZNF506Q5JVG8 444 aa15.96■□□□□ 0.15
C9orf3-222ENST00000496567 TMEM75Q8N9X5 138 aa15.96■□□□□ 0.15
C9orf3-222ENST00000496567 RARRES2Q99969 163 aa15.96■□□□□ 0.15
C9orf3-222ENST00000496567 C1QTNF4Q9BXJ3 329 aa15.96■□□□□ 0.15
C9orf3-222ENST00000496567 EIF5A2Q9GZV4 153 aaKnown RBP15.96■□□□□ 0.15
C9orf3-222ENST00000496567 SLC35B3Q9H1N7 401 aa15.96■□□□□ 0.15
C9orf3-222ENST00000496567 ZNF492Q9P255 531 aa15.96■□□□□ 0.15
C9orf3-222ENST00000496567 CA1P00915 261 aaPredicted RBP15.96■□□□□ 0.14
C9orf3-222ENST00000496567 AMBPP02760 352 aa15.96■□□□□ 0.14
C9orf3-222ENST00000496567 LENEPQ9Y5L5 61 aa15.96■□□□□ 0.14
C9orf3-222ENST00000496567 TRBV7-9A0A0J9YWB2 115 aa15.95■□□□□ 0.14
C9orf3-222ENST00000496567 SCO2A0A1W2PP80 73 aa15.95■□□□□ 0.14
C9orf3-222ENST00000496567 LEPP41159 167 aa15.95■□□□□ 0.14
C9orf3-222ENST00000496567 AKR1C3P42330 323 aa15.95■□□□□ 0.14
C9orf3-222ENST00000496567 TRAV8-1A0A0A6YYK1 113 aa15.94■□□□□ 0.14
C9orf3-222ENST00000496567 CDKN1BP46527 198 aa15.94■□□□□ 0.14
C9orf3-222ENST00000496567 FLI1Q01543 452 aaPredicted RBP15.94■□□□□ 0.14
C9orf3-222ENST00000496567 SPINK13Q1W4C9 94 aa15.94■□□□□ 0.14
C9orf3-222ENST00000496567 C11orf52Q96A22 123 aa15.94■□□□□ 0.14
C9orf3-222ENST00000496567 S100A9P06702 114 aaKnown RBP15.93■□□□□ 0.14
C9orf3-222ENST00000496567 FXYD7P58549 80 aa15.93■□□□□ 0.14
C9orf3-222ENST00000496567 UBE2G1P62253 170 aa15.93■□□□□ 0.14
C9orf3-222ENST00000496567 UQCC3Q6UW78 93 aa15.93■□□□□ 0.14
C9orf3-222ENST00000496567 Q8TAT8 98 aa15.93■□□□□ 0.14
C9orf3-222ENST00000496567 FMC1Q96HJ9 113 aa15.93■□□□□ 0.14
C9orf3-222ENST00000496567 FAM19A4Q96LR4 140 aa15.93■□□□□ 0.14
C9orf3-222ENST00000496567 LINC00479Q96M42 142 aa15.93■□□□□ 0.14
C9orf3-222ENST00000496567 TREM1Q9NP99 234 aa15.93■□□□□ 0.14
C9orf3-222ENST00000496567 PSG8Q9UQ74 426 aa15.93■□□□□ 0.14
C9orf3-222ENST00000496567 KLF12Q9Y4X4 402 aa15.93■□□□□ 0.14
C9orf3-222ENST00000496567 C9JQL5 133 aa15.92■□□□□ 0.14
C9orf3-222ENST00000496567 M0R2Z0 102 aa15.92■□□□□ 0.14
C9orf3-222ENST00000496567 IGLV2-11P01706 119 aa15.92■□□□□ 0.14
C9orf3-222ENST00000496567 C2CD4CQ8TF44 421 aa15.92■□□□□ 0.14
C9orf3-222ENST00000496567 SGK494Q96LW2 274 aa15.92■□□□□ 0.14
C9orf3-222ENST00000496567 B9D2Q9BPU9 175 aa15.92■□□□□ 0.14
C9orf3-222ENST00000496567 NDFIP1Q9BT67 221 aa15.92■□□□□ 0.14
C9orf3-222ENST00000496567 XCL2Q9UBD3 114 aa15.92■□□□□ 0.14
C9orf3-222ENST00000496567 TRAV34A0A0B4J273 112 aa15.92■□□□□ 0.14
C9orf3-222ENST00000496567 NDUFS6O75380 124 aaKnown RBP15.92■□□□□ 0.14
C9orf3-222ENST00000496567 GIG44P09565 113 aaPredicted RBP15.92■□□□□ 0.14
C9orf3-222ENST00000496567 CRISP2P16562 243 aa15.92■□□□□ 0.14
C9orf3-222ENST00000496567 PEA15Q15121 130 aa15.92■□□□□ 0.14
C9orf3-222ENST00000496567 TMEM183BQ1AE95 376 aa15.92■□□□□ 0.14
C9orf3-222ENST00000496567 Q6ZWC4 215 aa15.92■□□□□ 0.14
C9orf3-222ENST00000496567 SBSPONQ8IVN8 264 aa15.92■□□□□ 0.14
C9orf3-222ENST00000496567 PRNTQ86SH4 94 aa15.91■□□□□ 0.14
C9orf3-222ENST00000496567 TRBV6-1A0A0K0K1D8 114 aa15.9■□□□□ 0.14
C9orf3-222ENST00000496567 TMEM250H0YL14 139 aa15.9■□□□□ 0.14
C9orf3-222ENST00000496567 SAPCD1Q5SSQ6 148 aa15.9■□□□□ 0.14
C9orf3-222ENST00000496567 SMDT1Q9H4I9 107 aa15.9■□□□□ 0.14
C9orf3-222ENST00000496567 GPX1P07203 203 aa15.89■□□□□ 0.13
C9orf3-222ENST00000496567 IGF2BP2-AS1Q96M15 143 aa15.89■□□□□ 0.13
C9orf3-222ENST00000496567 FBN3Q75N90 2809 aa15.89■□□□□ 0.13
C9orf3-222ENST00000496567 TRAV12-2A0A075B6T6 113 aa15.88■□□□□ 0.13
C9orf3-222ENST00000496567 KLLNB2CW77 178 aa15.88■□□□□ 0.13
C9orf3-222ENST00000496567 CRXO43186 299 aaPredicted RBP15.88■□□□□ 0.13
C9orf3-222ENST00000496567 INSP01308 110 aa15.88■□□□□ 0.13
C9orf3-222ENST00000496567 Q86TA4 180 aa15.88■□□□□ 0.13
C9orf3-222ENST00000496567 ASCL2Q99929 193 aa15.88■□□□□ 0.13
C9orf3-222ENST00000496567 ZFP30Q9Y2G7 519 aa15.88■□□□□ 0.13
C9orf3-222ENST00000496567 J3KRW8 73 aa15.87■□□□□ 0.13
C9orf3-222ENST00000496567 RPL35P42766 123 aaKnown RBP15.87■□□□□ 0.13
C9orf3-222ENST00000496567 TAS2R60P59551 318 aa15.87■□□□□ 0.13
C9orf3-222ENST00000496567 DEFB135Q30KP9 77 aa15.87■□□□□ 0.13
C9orf3-222ENST00000496567 ZFAND2AQ8N6M9 145 aa15.87■□□□□ 0.13
C9orf3-222ENST00000496567 CSNK1G2-AS1Q8NCQ2 148 aa15.87■□□□□ 0.13
C9orf3-222ENST00000496567 RCHY1Q96PM5 261 aa15.87■□□□□ 0.13
C9orf3-222ENST00000496567 TVP23CQ96ET8 276 aa15.87■□□□□ 0.13
C9orf3-222ENST00000496567 C20orf144Q9BQM9 153 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms