RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 TMEM78Q5T7P6 136 aa6.05□□□□□ -1.44
SMARCD3-215ENST00000496530 KIR2DL5AQ8N109 375 aa6.05□□□□□ -1.44
SMARCD3-215ENST00000496530 KIR2DL5BQ8NHK3 375 aa6.05□□□□□ -1.44
SMARCD3-215ENST00000496530 LYPD6BQ8NI32 183 aa6.05□□□□□ -1.44
SMARCD3-215ENST00000496530 VGLL1Q99990 258 aa6.05□□□□□ -1.44
SMARCD3-215ENST00000496530 MAP6D1Q9H9H5 199 aa6.05□□□□□ -1.44
SMARCD3-215ENST00000496530 SCO2A0A1W2PP80 73 aa6.04□□□□□ -1.44
SMARCD3-215ENST00000496530 RAB19A4D1S5 217 aa6.04□□□□□ -1.44
SMARCD3-215ENST00000496530 RBMY1BA6NDE4 496 aaKnown RBP6.04□□□□□ -1.44
SMARCD3-215ENST00000496530 RBMY1EA6NEQ0 496 aaKnown RBP6.04□□□□□ -1.44
SMARCD3-215ENST00000496530 GGTLC3B5MD39 225 aa6.04□□□□□ -1.44
SMARCD3-215ENST00000496530 PEX7O00628 323 aa6.04□□□□□ -1.44
SMARCD3-215ENST00000496530 SOCS3O14543 225 aa6.04□□□□□ -1.44
SMARCD3-215ENST00000496530 PDE6DO43924 150 aa6.04□□□□□ -1.44
SMARCD3-215ENST00000496530 RBMY1DP0C7P1 496 aaKnown RBP6.04□□□□□ -1.44
SMARCD3-215ENST00000496530 AKR1C3P42330 323 aa6.04□□□□□ -1.44
SMARCD3-215ENST00000496530 CNN1P51911 297 aaKnown RBP6.04□□□□□ -1.44
SMARCD3-215ENST00000496530 MEF2BQ02080 365 aaPredicted RBP6.04□□□□□ -1.44
SMARCD3-215ENST00000496530 PMS2P11Q13670 270 aa6.04□□□□□ -1.44
SMARCD3-215ENST00000496530 ODF3L2Q3SX64 289 aa6.04□□□□□ -1.44
SMARCD3-215ENST00000496530 LINC00322Q6ZN03 302 aaPredicted RBP6.04□□□□□ -1.44
SMARCD3-215ENST00000496530 C5orf17Q8NAS9 161 aa6.04□□□□□ -1.44
SMARCD3-215ENST00000496530 OR8A1Q8NGG7 326 aa6.04□□□□□ -1.44
SMARCD3-215ENST00000496530 IL17DQ8TAD2 202 aa6.04□□□□□ -1.44
SMARCD3-215ENST00000496530 LINC00477Q96M19 166 aa6.04□□□□□ -1.44
SMARCD3-215ENST00000496530 TXNDC17Q9BRA2 123 aa6.04□□□□□ -1.44
SMARCD3-215ENST00000496530 AGPAT4-IT1Q9H0P7 198 aa6.04□□□□□ -1.44
SMARCD3-215ENST00000496530 NOTCH1P46531 2555 aa6.03□□□□□ -1.44
SMARCD3-215ENST00000496530 TRAV8-1A0A0A6YYK1 113 aa6.03□□□□□ -1.44
SMARCD3-215ENST00000496530 A0A0J9YX75 114 aa6.03□□□□□ -1.44
SMARCD3-215ENST00000496530 LINC00862A6NCI5 91 aa6.03□□□□□ -1.44
SMARCD3-215ENST00000496530 TCRAP04437 139 aa6.03□□□□□ -1.44
SMARCD3-215ENST00000496530 SRP19P09132 144 aaKnown RBP6.03□□□□□ -1.44
SMARCD3-215ENST00000496530 RNASE4P34096 147 aaKnown RBP6.03□□□□□ -1.44
SMARCD3-215ENST00000496530 NUTF2P61970 127 aaKnown RBP6.03□□□□□ -1.44
SMARCD3-215ENST00000496530 GDF5OSQ5U4N7 250 aa6.03□□□□□ -1.44
SMARCD3-215ENST00000496530 FOXI2Q6ZQN5 318 aa6.03□□□□□ -1.44
SMARCD3-215ENST00000496530 HIST1H2BAQ96A08 127 aa6.03□□□□□ -1.44
SMARCD3-215ENST00000496530 ATG101Q9BSB4 218 aa6.03□□□□□ -1.44
SMARCD3-215ENST00000496530 CSTL1Q9H114 145 aa6.03□□□□□ -1.44
SMARCD3-215ENST00000496530 SLC35B3Q9H1N7 401 aa6.03□□□□□ -1.44
SMARCD3-215ENST00000496530 SAV1Q9H4B6 383 aaPredicted RBP6.03□□□□□ -1.44
SMARCD3-215ENST00000496530 PSG8Q9UQ74 426 aa6.03□□□□□ -1.44
SMARCD3-215ENST00000496530 TP53TG1Q9Y2A0 90 aa6.03□□□□□ -1.44
SMARCD3-215ENST00000496530 MEGF8Q7Z7M0 2845 aa6.03□□□□□ -1.44
SMARCD3-215ENST00000496530 ZNF727A8MUV8 499 aa6.02□□□□□ -1.45
SMARCD3-215ENST00000496530 C9JQL5 133 aa6.02□□□□□ -1.45
SMARCD3-215ENST00000496530 H3BMM0 161 aa6.02□□□□□ -1.45
SMARCD3-215ENST00000496530 C3orf84H3BNL1 204 aa6.02□□□□□ -1.45
SMARCD3-215ENST00000496530 SPRY2O43597 315 aa6.02□□□□□ -1.45
SMARCD3-215ENST00000496530 S100A9P06702 114 aaKnown RBP6.02□□□□□ -1.45
SMARCD3-215ENST00000496530 GPX1P07203 203 aa6.02□□□□□ -1.45
SMARCD3-215ENST00000496530 CT45A10P0DMU9 189 aa6.02□□□□□ -1.45
SMARCD3-215ENST00000496530 MGST1P10620 155 aaKnown RBP6.02□□□□□ -1.45
SMARCD3-215ENST00000496530 ZNF138P52744 262 aa6.02□□□□□ -1.45
SMARCD3-215ENST00000496530 FLI1Q01543 452 aaPredicted RBP6.02□□□□□ -1.45
SMARCD3-215ENST00000496530 SOHLH1Q5JUK2 328 aa6.02□□□□□ -1.45
SMARCD3-215ENST00000496530 MORN3Q6PF18 240 aaPredicted RBP6.02□□□□□ -1.45
SMARCD3-215ENST00000496530 Q6ZWC4 215 aa6.02□□□□□ -1.45
SMARCD3-215ENST00000496530 BAGE2Q86Y30 109 aa6.02□□□□□ -1.45
SMARCD3-215ENST00000496530 CCDC28AQ8IWP9 274 aa6.02□□□□□ -1.45
SMARCD3-215ENST00000496530 CYB561D1Q8N8Q1 229 aa6.02□□□□□ -1.45
SMARCD3-215ENST00000496530 ANAPC16Q96DE5 110 aa6.02□□□□□ -1.45
SMARCD3-215ENST00000496530 MRPL53Q96EL3 112 aaKnown RBP6.02□□□□□ -1.45
SMARCD3-215ENST00000496530 NDFIP1Q9BT67 221 aa6.02□□□□□ -1.45
SMARCD3-215ENST00000496530 F8W036 122 aa6.01□□□□□ -1.45
SMARCD3-215ENST00000496530 CA1P00915 261 aaPredicted RBP6.01□□□□□ -1.45
SMARCD3-215ENST00000496530 HTN1P15515 57 aa6.01□□□□□ -1.45
SMARCD3-215ENST00000496530 TSPOP30536 169 aa6.01□□□□□ -1.45
SMARCD3-215ENST00000496530 RPL35P42766 123 aaKnown RBP6.01□□□□□ -1.45
SMARCD3-215ENST00000496530 NDUFA5Q16718 116 aa6.01□□□□□ -1.45
SMARCD3-215ENST00000496530 TMEM241Q24JQ0 296 aa6.01□□□□□ -1.45
SMARCD3-215ENST00000496530 SAPCD1Q5SSQ6 148 aa6.01□□□□□ -1.45
SMARCD3-215ENST00000496530 ARL6IP6Q8N6S5 226 aa6.01□□□□□ -1.45
SMARCD3-215ENST00000496530 NHLRC2Q8NBF2 726 aa6.01□□□□□ -1.45
SMARCD3-215ENST00000496530 DAZAP1Q96EP5 407 aaKnown RBP6.01□□□□□ -1.45
SMARCD3-215ENST00000496530 FMC1Q96HJ9 113 aa6.01□□□□□ -1.45
SMARCD3-215ENST00000496530 C1QTNF4Q9BXJ3 329 aa6.01□□□□□ -1.45
SMARCD3-215ENST00000496530 ARL2-SNX15V9GYD0 113 aa6.01□□□□□ -1.45
SMARCD3-215ENST00000496530 TRAV12-2A0A075B6T6 113 aa6□□□□□ -1.45
SMARCD3-215ENST00000496530 IGHV3OR16-12A0A075B7B8 117 aa6□□□□□ -1.45
SMARCD3-215ENST00000496530 SERTM2A0A1B0GWG4 89 aa6□□□□□ -1.45
SMARCD3-215ENST00000496530 RBAKDNA6NC62 111 aa6□□□□□ -1.45
SMARCD3-215ENST00000496530 M0R2Z0 102 aa6□□□□□ -1.45
SMARCD3-215ENST00000496530 SFTA3P0C7M3 94 aa6□□□□□ -1.45
SMARCD3-215ENST00000496530 LEPP41159 167 aa6□□□□□ -1.45
SMARCD3-215ENST00000496530 GNG4P50150 75 aa6□□□□□ -1.45
SMARCD3-215ENST00000496530 TAS2R60P59551 318 aa6□□□□□ -1.45
SMARCD3-215ENST00000496530 TMEM183BQ1AE95 376 aa6□□□□□ -1.45
SMARCD3-215ENST00000496530 SPINK13Q1W4C9 94 aa6□□□□□ -1.45
SMARCD3-215ENST00000496530 DEFB135Q30KP9 77 aa6□□□□□ -1.45
SMARCD3-215ENST00000496530 PRR27Q6MZM9 219 aa6□□□□□ -1.45
SMARCD3-215ENST00000496530 C9orf47Q6ZRZ4 202 aa6□□□□□ -1.45
SMARCD3-215ENST00000496530 OCC1Q8TAD7 63 aa6□□□□□ -1.45
SMARCD3-215ENST00000496530 Q8TAT8 98 aa6□□□□□ -1.45
SMARCD3-215ENST00000496530 MUC7Q8TAX7 377 aa6□□□□□ -1.45
SMARCD3-215ENST00000496530 C8orf49Q96NF6 230 aa6□□□□□ -1.45
SMARCD3-215ENST00000496530 SMIM7Q9BQ49 75 aa6□□□□□ -1.45
SMARCD3-215ENST00000496530 TMEM208Q9BTX3 173 aa6□□□□□ -1.45
SMARCD3-215ENST00000496530 DERL1Q9BUN8 251 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms