RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 KLF12Q9Y4X4 402 aa16.09■□□□□ 0.17
ECHDC3-205ENST00000496136 NDUFS6O75380 124 aaKnown RBP16.08■□□□□ 0.17
ECHDC3-205ENST00000496136 COMMD7Q86VX2 200 aa16.08■□□□□ 0.17
ECHDC3-205ENST00000496136 STHQ8IWL8 128 aa16.08■□□□□ 0.17
ECHDC3-205ENST00000496136 DUSP14O95147 198 aaKnown RBP16.08■□□□□ 0.16
ECHDC3-205ENST00000496136 IGKV3-20P01619 116 aa16.08■□□□□ 0.16
ECHDC3-205ENST00000496136 PRB2P02812 416 aaPredicted RBP16.08■□□□□ 0.16
ECHDC3-205ENST00000496136 DERL1Q9BUN8 251 aa16.08■□□□□ 0.16
ECHDC3-205ENST00000496136 AKR1C3P42330 323 aa16.07■□□□□ 0.16
ECHDC3-205ENST00000496136 TMEM78Q5T7P6 136 aa16.07■□□□□ 0.16
ECHDC3-205ENST00000496136 TMEM75Q8N9X5 138 aa16.07■□□□□ 0.16
ECHDC3-205ENST00000496136 SRD5A3Q9H8P0 318 aa16.07■□□□□ 0.16
ECHDC3-205ENST00000496136 A8MTW9 85 aa16.06■□□□□ 0.16
ECHDC3-205ENST00000496136 CT45A10P0DMU9 189 aa16.06■□□□□ 0.16
ECHDC3-205ENST00000496136 TRPT1Q86TN4 253 aaKnown RBP16.06■□□□□ 0.16
ECHDC3-205ENST00000496136 TREM1Q9NP99 234 aa16.06■□□□□ 0.16
ECHDC3-205ENST00000496136 ZNF492Q9P255 531 aa16.06■□□□□ 0.16
ECHDC3-205ENST00000496136 DNAH3Q8TD57 4116 aa16.05■□□□□ 0.16
ECHDC3-205ENST00000496136 RPL35P42766 123 aaKnown RBP16.05■□□□□ 0.16
ECHDC3-205ENST00000496136 FLI1Q01543 452 aaPredicted RBP16.05■□□□□ 0.16
ECHDC3-205ENST00000496136 TMEM183BQ1AE95 376 aa16.05■□□□□ 0.16
ECHDC3-205ENST00000496136 EIF4E3Q8N5X7 224 aaKnown RBP16.05■□□□□ 0.16
ECHDC3-205ENST00000496136 Q8TAT8 98 aa16.05■□□□□ 0.16
ECHDC3-205ENST00000496136 CLUHP3Q96NS8 147 aa16.05■□□□□ 0.16
ECHDC3-205ENST00000496136 SLC35B3Q9H1N7 401 aa16.05■□□□□ 0.16
ECHDC3-205ENST00000496136 AURKAIP1Q9NWT8 199 aaPredicted RBP16.05■□□□□ 0.16
ECHDC3-205ENST00000496136 PPP1R14DQ9NXH3 145 aa16.05■□□□□ 0.16
ECHDC3-205ENST00000496136 PSG8Q9UQ74 426 aa16.05■□□□□ 0.16
ECHDC3-205ENST00000496136 IGHV4-30-4P0DP06 118 aa16.05■□□□□ 0.16
ECHDC3-205ENST00000496136 ZNF138P52744 262 aa16.05■□□□□ 0.16
ECHDC3-205ENST00000496136 CEBPGP53567 150 aa16.05■□□□□ 0.16
ECHDC3-205ENST00000496136 AMTNQ6UX39 209 aa16.05■□□□□ 0.16
ECHDC3-205ENST00000496136 FMC1Q96HJ9 113 aa16.05■□□□□ 0.16
ECHDC3-205ENST00000496136 ASCL2Q99929 193 aa16.05■□□□□ 0.16
ECHDC3-205ENST00000496136 RBMY1BA6NDE4 496 aaKnown RBP16.04■□□□□ 0.16
ECHDC3-205ENST00000496136 RBMY1EA6NEQ0 496 aaKnown RBP16.04■□□□□ 0.16
ECHDC3-205ENST00000496136 RBMY1DP0C7P1 496 aaKnown RBP16.04■□□□□ 0.16
ECHDC3-205ENST00000496136 UBE2G1P62253 170 aa16.04■□□□□ 0.16
ECHDC3-205ENST00000496136 UQCC3Q6UW78 93 aa16.04■□□□□ 0.16
ECHDC3-205ENST00000496136 PRNTQ86SH4 94 aa16.04■□□□□ 0.16
ECHDC3-205ENST00000496136 TUBA4BQ9H853 241 aa16.04■□□□□ 0.16
ECHDC3-205ENST00000496136 FBLL1A6NHQ2 334 aaKnown RBP16.03■□□□□ 0.16
ECHDC3-205ENST00000496136 S100A9P06702 114 aaKnown RBP16.03■□□□□ 0.16
ECHDC3-205ENST00000496136 TVP23CQ96ET8 276 aa16.03■□□□□ 0.16
ECHDC3-205ENST00000496136 PARLQ9H300 379 aa16.03■□□□□ 0.16
ECHDC3-205ENST00000496136 RPL35AP18077 110 aaKnown RBP16.03■□□□□ 0.16
ECHDC3-205ENST00000496136 FAM19A4Q96LR4 140 aa16.03■□□□□ 0.16
ECHDC3-205ENST00000496136 TAS2R60P59551 318 aa16.02■□□□□ 0.15
ECHDC3-205ENST00000496136 TRBV6-1A0A0K0K1D8 114 aa16.01■□□□□ 0.15
ECHDC3-205ENST00000496136 ZNF674Q2M3X9 581 aa16.01■□□□□ 0.15
ECHDC3-205ENST00000496136 LENEPQ9Y5L5 61 aa16.01■□□□□ 0.15
ECHDC3-205ENST00000496136 A8MZ25 164 aa16■□□□□ 0.15
ECHDC3-205ENST00000496136 K7EIL1 84 aa16■□□□□ 0.15
ECHDC3-205ENST00000496136 LTAP01374 205 aa16■□□□□ 0.15
ECHDC3-205ENST00000496136 Q86TA4 180 aa16■□□□□ 0.15
ECHDC3-205ENST00000496136 ODF3Q96PU9 254 aa16■□□□□ 0.15
ECHDC3-205ENST00000496136 TRBV20OR9-2A0A075B6H5 130 aa16■□□□□ 0.15
ECHDC3-205ENST00000496136 LINC00322Q6ZN03 302 aaPredicted RBP16■□□□□ 0.15
ECHDC3-205ENST00000496136 SLC7A5P1Q8MH63 180 aa16■□□□□ 0.15
ECHDC3-205ENST00000496136 ZFP30Q9Y2G7 519 aa16■□□□□ 0.15
ECHDC3-205ENST00000496136 LOC102724200A0A096LPH7 203 aaPredicted RBP15.99■□□□□ 0.15
ECHDC3-205ENST00000496136 TRBV7-9A0A0J9YWB2 115 aa15.99■□□□□ 0.15
ECHDC3-205ENST00000496136 M0R2Z0 102 aa15.99■□□□□ 0.15
ECHDC3-205ENST00000496136 SFTA3P0C7M3 94 aa15.99■□□□□ 0.15
ECHDC3-205ENST00000496136 FXYD7P58549 80 aa15.99■□□□□ 0.15
ECHDC3-205ENST00000496136 NUTF2P61970 127 aaKnown RBP15.99■□□□□ 0.15
ECHDC3-205ENST00000496136 SPINK13Q1W4C9 94 aa15.99■□□□□ 0.15
ECHDC3-205ENST00000496136 SAPCD1Q5SSQ6 148 aa15.99■□□□□ 0.15
ECHDC3-205ENST00000496136 BAGE2Q86Y30 109 aa15.99■□□□□ 0.15
ECHDC3-205ENST00000496136 IGF2BP2-AS1Q96M15 143 aa15.99■□□□□ 0.15
ECHDC3-205ENST00000496136 CRISP2P16562 243 aa15.98■□□□□ 0.15
ECHDC3-205ENST00000496136 CDKN1BP46527 198 aa15.98■□□□□ 0.15
ECHDC3-205ENST00000496136 KIR3DS1Q14943 382 aa15.98■□□□□ 0.15
ECHDC3-205ENST00000496136 SOHLH1Q5JUK2 328 aa15.98■□□□□ 0.15
ECHDC3-205ENST00000496136 ZFAND2AQ8N6M9 145 aa15.98■□□□□ 0.15
ECHDC3-205ENST00000496136 ZNF727A8MUV8 499 aa15.98■□□□□ 0.15
ECHDC3-205ENST00000496136 CENPWQ5EE01 88 aa15.98■□□□□ 0.15
ECHDC3-205ENST00000496136 C8orf49Q96NF6 230 aa15.98■□□□□ 0.15
ECHDC3-205ENST00000496136 SMIM7Q9BQ49 75 aa15.98■□□□□ 0.15
ECHDC3-205ENST00000496136 NDFIP1Q9BT67 221 aa15.98■□□□□ 0.15
ECHDC3-205ENST00000496136 GIG44P09565 113 aaPredicted RBP15.97■□□□□ 0.15
ECHDC3-205ENST00000496136 TSPOP30536 169 aa15.97■□□□□ 0.15
ECHDC3-205ENST00000496136 GNG4P50150 75 aa15.97■□□□□ 0.15
ECHDC3-205ENST00000496136 NDUFA5Q16718 116 aa15.97■□□□□ 0.15
ECHDC3-205ENST00000496136 MLST8Q9BVC4 326 aa15.97■□□□□ 0.15
ECHDC3-205ENST00000496136 CSTL1Q9H114 145 aa15.97■□□□□ 0.15
ECHDC3-205ENST00000496136 TMEM218A2RU14 115 aa15.96■□□□□ 0.15
ECHDC3-205ENST00000496136 J3KRW8 73 aa15.96■□□□□ 0.15
ECHDC3-205ENST00000496136 LEPP41159 167 aa15.96■□□□□ 0.15
ECHDC3-205ENST00000496136 MORN3Q6PF18 240 aaPredicted RBP15.96■□□□□ 0.15
ECHDC3-205ENST00000496136 TMEM183AQ8IXX5 376 aa15.96■□□□□ 0.15
ECHDC3-205ENST00000496136 NHLRC2Q8NBF2 726 aa15.96■□□□□ 0.15
ECHDC3-205ENST00000496136 TRAV12-2A0A075B6T6 113 aa15.95■□□□□ 0.14
ECHDC3-205ENST00000496136 PGPEP1LA6NFU8 196 aa15.95■□□□□ 0.14
ECHDC3-205ENST00000496136 KLLNB2CW77 178 aa15.95■□□□□ 0.14
ECHDC3-205ENST00000496136 C9JCJ5 164 aa15.95■□□□□ 0.14
ECHDC3-205ENST00000496136 CRXO43186 299 aaPredicted RBP15.95■□□□□ 0.14
ECHDC3-205ENST00000496136 IGLV2-8P01709 118 aa15.95■□□□□ 0.14
ECHDC3-205ENST00000496136 GPX1P07203 203 aa15.95■□□□□ 0.14
ECHDC3-205ENST00000496136 FAM74A3Q4VXF1 159 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms