RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 ST6GAL2Q96JF0 529 aa8.04□□□□□ -1.12
GPNMB-214ENST00000492858 C8orf49Q96NF6 230 aa8.04□□□□□ -1.12
GPNMB-214ENST00000492858 HIGD1AQ9Y241 93 aa8.04□□□□□ -1.12
GPNMB-214ENST00000492858 CCSO14618 274 aa8.03□□□□□ -1.12
GPNMB-214ENST00000492858 SLAQ13239 276 aa8.03□□□□□ -1.12
GPNMB-214ENST00000492858 IAH1Q2TAA2 248 aaPredicted RBP8.03□□□□□ -1.12
GPNMB-214ENST00000492858 SCXQ7RTU7 201 aa8.03□□□□□ -1.12
GPNMB-214ENST00000492858 C11orf72Q8NBR9 251 aa8.03□□□□□ -1.12
GPNMB-214ENST00000492858 MGAT4CQ9UBM8 478 aa8.03□□□□□ -1.12
GPNMB-214ENST00000492858 HHLA3Q9XRX5 114 aa8.03□□□□□ -1.12
GPNMB-214ENST00000492858 PRAC2D3DTV9 90 aa8.02□□□□□ -1.13
GPNMB-214ENST00000492858 E5RGE8 158 aa8.02□□□□□ -1.13
GPNMB-214ENST00000492858 G3V3Q6 166 aa8.02□□□□□ -1.13
GPNMB-214ENST00000492858 SPINK4O60575 86 aa8.02□□□□□ -1.13
GPNMB-214ENST00000492858 HYPMO75409 117 aa8.02□□□□□ -1.13
GPNMB-214ENST00000492858 MBPP02686 304 aaPredicted RBP8.02□□□□□ -1.13
GPNMB-214ENST00000492858 SNRPCP09234 159 aaKnown RBP8.02□□□□□ -1.13
GPNMB-214ENST00000492858 TAS2R30P59541 319 aa8.02□□□□□ -1.13
GPNMB-214ENST00000492858 AKR1C1Q04828 323 aa8.02□□□□□ -1.13
GPNMB-214ENST00000492858 Q9HAA7 133 aa8.02□□□□□ -1.13
GPNMB-214ENST00000492858 ZNF331Q9NQX6 463 aaPredicted RBP8.02□□□□□ -1.13
GPNMB-214ENST00000492858 RCL1Q9Y2P8 373 aaKnown RBP8.02□□□□□ -1.13
GPNMB-214ENST00000492858 KLF12Q9Y4X4 402 aa8.02□□□□□ -1.13
GPNMB-214ENST00000492858 TRAV5A0A0B4J249 113 aa8.01□□□□□ -1.13
GPNMB-214ENST00000492858 PMS2P5A8MQ11 134 aa8.01□□□□□ -1.13
GPNMB-214ENST00000492858 K7EPK0 472 aa8.01□□□□□ -1.13
GPNMB-214ENST00000492858 K7EQD1 137 aa8.01□□□□□ -1.13
GPNMB-214ENST00000492858 GOSR2O14653 212 aa8.01□□□□□ -1.13
GPNMB-214ENST00000492858 SYNGR2O43760 224 aa8.01□□□□□ -1.13
GPNMB-214ENST00000492858 SSNA1O43805 119 aa8.01□□□□□ -1.13
GPNMB-214ENST00000492858 MED6O75586 246 aa8.01□□□□□ -1.13
GPNMB-214ENST00000492858 SIX6O95475 246 aa8.01□□□□□ -1.13
GPNMB-214ENST00000492858 OR5G3P0C626 314 aa8.01□□□□□ -1.13
GPNMB-214ENST00000492858 CT45A10P0DMU9 189 aa8.01□□□□□ -1.13
GPNMB-214ENST00000492858 SRIP30626 198 aa8.01□□□□□ -1.13
GPNMB-214ENST00000492858 LEPP41159 167 aa8.01□□□□□ -1.13
GPNMB-214ENST00000492858 CYCSP99999 105 aaKnown RBP8.01□□□□□ -1.13
GPNMB-214ENST00000492858 ZNF415Q09FC8 603 aa8.01□□□□□ -1.13
GPNMB-214ENST00000492858 FHL2Q14192 279 aa8.01□□□□□ -1.13
GPNMB-214ENST00000492858 CYP2G1PQ6ZSU1 146 aa8.01□□□□□ -1.13
GPNMB-214ENST00000492858 SMIM8Q96KF7 97 aa8.01□□□□□ -1.13
GPNMB-214ENST00000492858 MED28Q9H204 178 aa8.01□□□□□ -1.13
GPNMB-214ENST00000492858 MRPL16Q9NX20 251 aaKnown RBP8.01□□□□□ -1.13
GPNMB-214ENST00000492858 TNXBP22105 4242 aa8□□□□□ -1.13
GPNMB-214ENST00000492858 PRSS46E5RG02 174 aa8□□□□□ -1.13
GPNMB-214ENST00000492858 H0YIZ8 118 aa8□□□□□ -1.13
GPNMB-214ENST00000492858 GIPP09681 153 aaPredicted RBP8□□□□□ -1.13
GPNMB-214ENST00000492858 CXCL2P19875 107 aa8□□□□□ -1.13
GPNMB-214ENST00000492858 TCL1AP56279 114 aa8□□□□□ -1.13
GPNMB-214ENST00000492858 TEPPQ6URK8 271 aa8□□□□□ -1.13
GPNMB-214ENST00000492858 LCN15Q6UWW0 184 aa8□□□□□ -1.13
GPNMB-214ENST00000492858 VGLL1Q99990 258 aa8□□□□□ -1.13
GPNMB-214ENST00000492858 A0A1B0GVG6 124 aa7.99□□□□□ -1.13
GPNMB-214ENST00000492858 C5orf51A6NDU8 294 aa7.99□□□□□ -1.13
GPNMB-214ENST00000492858 MRPS12O15235 138 aaKnown RBP7.99□□□□□ -1.13
GPNMB-214ENST00000492858 RS1O15537 224 aa7.99□□□□□ -1.13
GPNMB-214ENST00000492858 TSC22D2O75157 780 aa7.99□□□□□ -1.13
GPNMB-214ENST00000492858 LINC00869P0C866 280 aa7.99□□□□□ -1.13
GPNMB-214ENST00000492858 POLR2GP62487 172 aaKnown RBP eCLIP7.99□□□□□ -1.13
GPNMB-214ENST00000492858 RAB32Q13637 225 aa7.99□□□□□ -1.13
GPNMB-214ENST00000492858 WFDC2Q14508 124 aa7.99□□□□□ -1.13
GPNMB-214ENST00000492858 TMEM14EPQ6UXP3 125 aa7.99□□□□□ -1.13
GPNMB-214ENST00000492858 ACOT7LQ6ZUV0 252 aa7.99□□□□□ -1.13
GPNMB-214ENST00000492858 EIF4E3Q8N5X7 224 aaKnown RBP7.99□□□□□ -1.13
GPNMB-214ENST00000492858 PCNPQ8WW12 178 aaKnown RBP7.99□□□□□ -1.13
GPNMB-214ENST00000492858 ODF3Q96PU9 254 aa7.99□□□□□ -1.13
GPNMB-214ENST00000492858 CIB3Q96Q77 187 aaPredicted RBP7.99□□□□□ -1.13
GPNMB-214ENST00000492858 SLC50A1Q9BRV3 221 aa7.99□□□□□ -1.13
GPNMB-214ENST00000492858 MRPL32Q9BYC8 188 aaKnown RBP7.99□□□□□ -1.13
GPNMB-214ENST00000492858 TRGV4A0A0C4DH28 118 aa7.98□□□□□ -1.13
GPNMB-214ENST00000492858 IGHV3-38A0A0C4DH36 116 aa7.98□□□□□ -1.13
GPNMB-214ENST00000492858 SMCO3A2RU48 225 aa7.98□□□□□ -1.13
GPNMB-214ENST00000492858 C7orf71A4D174 169 aa7.98□□□□□ -1.13
GPNMB-214ENST00000492858 IBA57-AS1B1ANH7 110 aa7.98□□□□□ -1.13
GPNMB-214ENST00000492858 H3BTX0 84 aa7.98□□□□□ -1.13
GPNMB-214ENST00000492858 SLC17A3O00476 420 aa7.98□□□□□ -1.13
GPNMB-214ENST00000492858 MPC2O95563 127 aa7.98□□□□□ -1.13
GPNMB-214ENST00000492858 GYPEP15421 78 aa7.98□□□□□ -1.13
GPNMB-214ENST00000492858 BCAP31P51572 246 aa7.98□□□□□ -1.13
GPNMB-214ENST00000492858 PLP1P60201 277 aa7.98□□□□□ -1.13
GPNMB-214ENST00000492858 ANXA2RQ3ZCQ2 193 aa7.98□□□□□ -1.13
GPNMB-214ENST00000492858 LINC01620Q4KN68 170 aa7.98□□□□□ -1.13
GPNMB-214ENST00000492858 S100A7AQ86SG5 101 aa7.98□□□□□ -1.13
GPNMB-214ENST00000492858 PPP1R1CQ8WVI7 109 aa7.98□□□□□ -1.13
GPNMB-214ENST00000492858 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.97□□□□□ -1.13
GPNMB-214ENST00000492858 WRBO00258 174 aa7.97□□□□□ -1.13
GPNMB-214ENST00000492858 SLC25A5P05141 298 aaKnown RBP7.97□□□□□ -1.13
GPNMB-214ENST00000492858 RPP30P78346 268 aaKnown RBP7.97□□□□□ -1.13
GPNMB-214ENST00000492858 Q5BKY6 102 aa7.97□□□□□ -1.13
GPNMB-214ENST00000492858 TXNDC17Q9BRA2 123 aa7.97□□□□□ -1.13
GPNMB-214ENST00000492858 CHAC1Q9BUX1 264 aa7.97□□□□□ -1.13
GPNMB-214ENST00000492858 ARL6Q9H0F7 186 aa7.97□□□□□ -1.13
GPNMB-214ENST00000492858 GSKIPQ9P0R6 139 aa7.97□□□□□ -1.13
GPNMB-214ENST00000492858 FAM25EA8MYX2 175 aa7.96□□□□□ -1.14
GPNMB-214ENST00000492858 FNDC10F2Z333 226 aa7.96□□□□□ -1.14
GPNMB-214ENST00000492858 H3BP45 60 aa7.96□□□□□ -1.14
GPNMB-214ENST00000492858 LECT2O14960 151 aa7.96□□□□□ -1.14
GPNMB-214ENST00000492858 SFTA3P0C7M3 94 aa7.96□□□□□ -1.14
GPNMB-214ENST00000492858 BTN1A1Q13410 526 aa7.96□□□□□ -1.14
GPNMB-214ENST00000492858 LINC01556Q5JQF7 62 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms