RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 AKIRIN1Q9H9L7 192 aaPredicted RBP7.58□□□□□ -1.2
VPS8-225ENST00000492449 IGKV1D-17A0A075B6S4 117 aa7.57□□□□□ -1.2
VPS8-225ENST00000492449 E7EUB6 86 aa7.57□□□□□ -1.2
VPS8-225ENST00000492449 SH2D1AO60880 128 aa7.57□□□□□ -1.2
VPS8-225ENST00000492449 IGHV3-13P01766 116 aa7.57□□□□□ -1.2
VPS8-225ENST00000492449 HLA-DMBP28068 263 aa7.57□□□□□ -1.2
VPS8-225ENST00000492449 HES1Q14469 280 aa7.57□□□□□ -1.2
VPS8-225ENST00000492449 TMEM167AQ8TBQ9 72 aa7.57□□□□□ -1.2
VPS8-225ENST00000492449 NDUFA3O95167 84 aa7.57□□□□□ -1.2
VPS8-225ENST00000492449 LAGE3Q14657 143 aa7.57□□□□□ -1.2
VPS8-225ENST00000492449 SIGLEC15Q6ZMC9 328 aa7.57□□□□□ -1.2
VPS8-225ENST00000492449 LINC00574Q9H8X3 128 aa7.57□□□□□ -1.2
VPS8-225ENST00000492449 ASCC3Q8N3C0 2202 aaKnown RBP7.57□□□□□ -1.2
VPS8-225ENST00000492449 TRAV2A0A0B4J234 112 aa7.56□□□□□ -1.2
VPS8-225ENST00000492449 LGALS9O00182 355 aa7.56□□□□□ -1.2
VPS8-225ENST00000492449 TIMM23O14925 209 aa7.56□□□□□ -1.2
VPS8-225ENST00000492449 NDUFA7O95182 113 aa7.56□□□□□ -1.2
VPS8-225ENST00000492449 CFC1BP0CG36 223 aa7.56□□□□□ -1.2
VPS8-225ENST00000492449 CFC1P0CG37 223 aa7.56□□□□□ -1.2
VPS8-225ENST00000492449 CD40P25942 277 aa7.56□□□□□ -1.2
VPS8-225ENST00000492449 LEAP2Q969E1 77 aa7.56□□□□□ -1.2
VPS8-225ENST00000492449 C8orf49Q96NF6 230 aa7.56□□□□□ -1.2
VPS8-225ENST00000492449 IMUPQ9GZP8 106 aa7.56□□□□□ -1.2
VPS8-225ENST00000492449 FOXC1Q12948 553 aa7.56□□□□□ -1.2
VPS8-225ENST00000492449 C6orf15Q6UXA7 325 aaPredicted RBP7.56□□□□□ -1.2
VPS8-225ENST00000492449 ASXL3Q9C0F0 2248 aa7.56□□□□□ -1.2
VPS8-225ENST00000492449 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.56□□□□□ -1.2
VPS8-225ENST00000492449 C9JAW5 83 aa7.56□□□□□ -1.2
VPS8-225ENST00000492449 ZNF575Q86XF7 245 aa7.56□□□□□ -1.2
VPS8-225ENST00000492449 KLF14Q8TD94 323 aaPredicted RBP7.56□□□□□ -1.2
VPS8-225ENST00000492449 TIMD4Q96H15 378 aa7.56□□□□□ -1.2
VPS8-225ENST00000492449 CHCHD5Q9BSY4 110 aa7.56□□□□□ -1.2
VPS8-225ENST00000492449 ONECUT1Q9UBC0 465 aa7.56□□□□□ -1.2
VPS8-225ENST00000492449 PCNX2A6NKB5 2137 aa7.55□□□□□ -1.2
VPS8-225ENST00000492449 TRIOO75962 3097 aa7.55□□□□□ -1.2
VPS8-225ENST00000492449 SRRM5B3KS81 715 aa7.55□□□□□ -1.2
VPS8-225ENST00000492449 SLC25A16P16260 332 aa7.55□□□□□ -1.2
VPS8-225ENST00000492449 EBI3Q14213 229 aa7.55□□□□□ -1.2
VPS8-225ENST00000492449 RUSC1-AS1Q66K80 236 aa7.55□□□□□ -1.2
VPS8-225ENST00000492449 SFTA2Q6UW10 78 aa7.55□□□□□ -1.2
VPS8-225ENST00000492449 ZNF833PQ6ZTB9 187 aa7.55□□□□□ -1.2
VPS8-225ENST00000492449 FAM19A5Q7Z5A7 132 aaPredicted RBP7.55□□□□□ -1.2
VPS8-225ENST00000492449 NTN5Q8WTR8 489 aaPredicted RBP7.55□□□□□ -1.2
VPS8-225ENST00000492449 C12orf49Q9H741 205 aa7.55□□□□□ -1.2
VPS8-225ENST00000492449 PRO1854Q9UHT4 67 aa7.55□□□□□ -1.2
VPS8-225ENST00000492449 ZNF815PA8K554 130 aa7.55□□□□□ -1.2
VPS8-225ENST00000492449 NPFFO15130 113 aa7.55□□□□□ -1.2
VPS8-225ENST00000492449 GAS8-AS1O95177 125 aa7.55□□□□□ -1.2
VPS8-225ENST00000492449 RPL7P18124 248 aaKnown RBP7.55□□□□□ -1.2
VPS8-225ENST00000492449 NXPH1P58417 271 aa7.55□□□□□ -1.2
VPS8-225ENST00000492449 SRSF9Q13242 221 aaKnown RBP eCLIP7.55□□□□□ -1.2
VPS8-225ENST00000492449 DEFB121Q5J5C9 76 aa7.55□□□□□ -1.2
VPS8-225ENST00000492449 C3orf22Q8N5N4 141 aa7.55□□□□□ -1.2
VPS8-225ENST00000492449 PRADC1Q9BSG0 188 aa7.55□□□□□ -1.2
VPS8-225ENST00000492449 IGHV3-48P01763 117 aa7.54□□□□□ -1.2
VPS8-225ENST00000492449 IGHV3-30P01768 117 aa7.54□□□□□ -1.2
VPS8-225ENST00000492449 IGHV3-30-5P0DP03 117 aa7.54□□□□□ -1.2
VPS8-225ENST00000492449 GLRXP35754 106 aa7.54□□□□□ -1.2
VPS8-225ENST00000492449 PLGLAQ15195 96 aa7.54□□□□□ -1.2
VPS8-225ENST00000492449 PLEKHB2Q96CS7 222 aa7.54□□□□□ -1.2
VPS8-225ENST00000492449 PRR25Q96S07 402 aa7.54□□□□□ -1.2
VPS8-225ENST00000492449 NGBQ9NPG2 151 aa7.54□□□□□ -1.2
VPS8-225ENST00000492449 A4D1N5 150 aa7.54□□□□□ -1.2
VPS8-225ENST00000492449 CRIP2P52943 208 aaPredicted RBP7.54□□□□□ -1.2
VPS8-225ENST00000492449 TDHQ8IZJ6 230 aa7.54□□□□□ -1.2
VPS8-225ENST00000492449 POM121L12Q8N7R1 296 aa7.54□□□□□ -1.2
VPS8-225ENST00000492449 NEXN-AS1Q8NBZ9 246 aa7.54□□□□□ -1.2
VPS8-225ENST00000492449 OR13C6PQ8NH95 151 aa7.54□□□□□ -1.2
VPS8-225ENST00000492449 A0A0J9YY99 117 aa7.53□□□□□ -1.2
VPS8-225ENST00000492449 UQCRQO14949 82 aa7.53□□□□□ -1.2
VPS8-225ENST00000492449 TNFAIP6P98066 277 aaPredicted RBP7.53□□□□□ -1.2
VPS8-225ENST00000492449 MZT1Q08AG7 82 aa7.53□□□□□ -1.2
VPS8-225ENST00000492449 LINC00526Q96FQ7 95 aa7.53□□□□□ -1.2
VPS8-225ENST00000492449 TMEM101Q96IK0 257 aa7.53□□□□□ -1.2
VPS8-225ENST00000492449 SCNM1Q9BWG6 230 aa7.53□□□□□ -1.2
VPS8-225ENST00000492449 MRPS12O15235 138 aaKnown RBP7.53□□□□□ -1.2
VPS8-225ENST00000492449 ATP5G1P05496 136 aa7.53□□□□□ -1.2
VPS8-225ENST00000492449 EGR2P11161 476 aaPredicted RBP7.53□□□□□ -1.2
VPS8-225ENST00000492449 TEX36Q5VZQ5 186 aa7.53□□□□□ -1.2
VPS8-225ENST00000492449 SCGB1D4Q6XE38 83 aa7.53□□□□□ -1.2
VPS8-225ENST00000492449 IL17RELQ6ZVW7 336 aa7.53□□□□□ -1.2
VPS8-225ENST00000492449 TMEM219Q86XT9 240 aa7.53□□□□□ -1.2
VPS8-225ENST00000492449 TRBV10-2A0A0K0K1G8 114 aa7.53□□□□□ -1.2
VPS8-225ENST00000492449 LOC107984640A0A0U1RRK4 108 aa7.53□□□□□ -1.2
VPS8-225ENST00000492449 PINLYPA6NC86 204 aa7.53□□□□□ -1.2
VPS8-225ENST00000492449 H3BMM0 161 aa7.53□□□□□ -1.2
VPS8-225ENST00000492449 CECR9P0C854 216 aa7.53□□□□□ -1.2
VPS8-225ENST00000492449 ATXN8Q156A1 80 aa7.53□□□□□ -1.2
VPS8-225ENST00000492449 ZNF672Q499Z4 452 aaPredicted RBP7.53□□□□□ -1.2
VPS8-225ENST00000492449 NRACQ8N912 160 aa7.53□□□□□ -1.2
VPS8-225ENST00000492449 UBE2WQ96B02 151 aa7.53□□□□□ -1.2
VPS8-225ENST00000492449 FSCN3Q9NQT6 498 aa7.53□□□□□ -1.2
VPS8-225ENST00000492449 CNTRLQ7Z7A1 2325 aa7.52□□□□□ -1.21
VPS8-225ENST00000492449 IGHV1OR15-9A0A0B4J2B8 117 aa7.52□□□□□ -1.21
VPS8-225ENST00000492449 H3BRN7 92 aa7.52□□□□□ -1.21
VPS8-225ENST00000492449 PDE6HQ13956 83 aa7.52□□□□□ -1.21
VPS8-225ENST00000492449 LINC01620Q4KN68 170 aa7.52□□□□□ -1.21
VPS8-225ENST00000492449 ASCL2Q99929 193 aa7.52□□□□□ -1.21
VPS8-225ENST00000492449 SHANK2-AS3Q9BTD1 123 aa7.52□□□□□ -1.21
VPS8-225ENST00000492449 IGLV2-23P01705 113 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms