RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	BTN1A1	Q13410	526 aa		13.31	□□□□□ -0.28
C4A-256	ENST00000490663	PRR9	Q5T870	116 aa		13.31	□□□□□ -0.28
C4A-256	ENST00000490663	LINC01587	Q99440	93 aa		13.31	□□□□□ -0.28
C4A-256	ENST00000490663	ZNF471	Q9BX82	626 aa	Predicted RBP	13.31	□□□□□ -0.28
C4A-256	ENST00000490663	ACTR3C	Q9C0K3	210 aa	Predicted RBP	13.31	□□□□□ -0.28
C4A-256	ENST00000490663	ALMS1	Q8TCU4	4167 aa		13.3	□□□□□ -0.28
C4A-256	ENST00000490663	PLEC	Q15149	4684 aa	Known RBP	13.3	□□□□□ -0.28
C4A-256	ENST00000490663	PGP	A6NDG6	321 aa		13.3	□□□□□ -0.28
C4A-256	ENST00000490663	LEP	P41159	167 aa		13.3	□□□□□ -0.28
C4A-256	ENST00000490663	AKR1C8P	Q5T2L2	129 aa		13.3	□□□□□ -0.28
C4A-256	ENST00000490663	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.3	□□□□□ -0.28
C4A-256	ENST00000490663	TMUB2	Q71RG4	321 aa		13.3	□□□□□ -0.28
C4A-256	ENST00000490663	TMPRSS5	Q9H3S3	457 aa		13.3	□□□□□ -0.28
C4A-256	ENST00000490663	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.3	□□□□□ -0.28
C4A-256	ENST00000490663		A0A0D9SG52	128 aa		13.29	□□□□□ -0.28
C4A-256	ENST00000490663	KANTR	A0A1W2PQU2	76 aa		13.29	□□□□□ -0.28
C4A-256	ENST00000490663	SMIM9	A6NGZ8	99 aa		13.29	□□□□□ -0.28
C4A-256	ENST00000490663	TSPO	P30536	169 aa		13.29	□□□□□ -0.28
C4A-256	ENST00000490663	C12orf74	Q32Q52	190 aa		13.29	□□□□□ -0.28
C4A-256	ENST00000490663	TMEM78	Q5T7P6	136 aa		13.29	□□□□□ -0.28
C4A-256	ENST00000490663	FAM222A	Q5U5X8	452 aa		13.29	□□□□□ -0.28
C4A-256	ENST00000490663		Q6ZQT7	251 aa		13.29	□□□□□ -0.28
C4A-256	ENST00000490663	C9orf47	Q6ZRZ4	202 aa		13.29	□□□□□ -0.28
C4A-256	ENST00000490663	OTOR	Q9NRC9	128 aa		13.29	□□□□□ -0.28
C4A-256	ENST00000490663	CTXND1	A0A1B0GTU2	59 aa		13.28	□□□□□ -0.28
C4A-256	ENST00000490663	NUPR2	A6NF83	97 aa		13.28	□□□□□ -0.28
C4A-256	ENST00000490663	DIRC3	C9JPN6	131 aa		13.28	□□□□□ -0.28
C4A-256	ENST00000490663	PFDN1	O60925	122 aa		13.28	□□□□□ -0.28
C4A-256	ENST00000490663	CSN1S1	P47710	185 aa		13.28	□□□□□ -0.28
C4A-256	ENST00000490663	FHIT	P49789	147 aa		13.28	□□□□□ -0.28
C4A-256	ENST00000490663	TCTE3	Q8IZS6	198 aa		13.28	□□□□□ -0.28
C4A-256	ENST00000490663	LYPD1	Q8N2G4	141 aa		13.28	□□□□□ -0.28
C4A-256	ENST00000490663	FAM19A4	Q96LR4	140 aa		13.28	□□□□□ -0.28
C4A-256	ENST00000490663	ODF3	Q96PU9	254 aa		13.28	□□□□□ -0.28
C4A-256	ENST00000490663	CXorf1	O96002	111 aa		13.27	□□□□□ -0.29
C4A-256	ENST00000490663	SLC25A5	P05141	298 aa	Known RBP	13.27	□□□□□ -0.29
C4A-256	ENST00000490663	RNASE4	P34096	147 aa	Known RBP	13.27	□□□□□ -0.29
C4A-256	ENST00000490663	GOLT1A	Q6ZVE7	132 aa		13.27	□□□□□ -0.29
C4A-256	ENST00000490663	SGK494	Q96LW2	274 aa		13.27	□□□□□ -0.29
C4A-256	ENST00000490663	LINC00477	Q96M19	166 aa		13.27	□□□□□ -0.29
C4A-256	ENST00000490663	ZNF492	Q9P255	531 aa		13.27	□□□□□ -0.29
C4A-256	ENST00000490663	TRAV8-1	A0A0A6YYK1	113 aa		13.26	□□□□□ -0.29
C4A-256	ENST00000490663	PLAC8L1	A1L4L8	177 aa		13.26	□□□□□ -0.29
C4A-256	ENST00000490663	C7orf71	A4D174	169 aa		13.26	□□□□□ -0.29
C4A-256	ENST00000490663	NACA	E9PAV3	2078 aa		13.26	□□□□□ -0.29
C4A-256	ENST00000490663	ZNF138	P52744	262 aa		13.26	□□□□□ -0.29
C4A-256	ENST00000490663	UBE2G2	P60604	165 aa		13.26	□□□□□ -0.29
C4A-256	ENST00000490663	LGALSL	Q3ZCW2	172 aa	Predicted RBP	13.26	□□□□□ -0.29
C4A-256	ENST00000490663	AKAP14	Q86UN6	197 aa		13.26	□□□□□ -0.29
C4A-256	ENST00000490663	TMEM256	Q8N2U0	113 aa		13.26	□□□□□ -0.29
C4A-256	ENST00000490663	ZFAND2A	Q8N6M9	145 aa		13.26	□□□□□ -0.29
C4A-256	ENST00000490663	CMTM2	Q8TAZ6	248 aa		13.26	□□□□□ -0.29
C4A-256	ENST00000490663	DKK2	Q9UBU2	259 aa		13.26	□□□□□ -0.29
C4A-256	ENST00000490663		A0A1B0GV50	99 aa		13.25	□□□□□ -0.29
C4A-256	ENST00000490663	MAP1LC3B2	A6NCE7	125 aa		13.25	□□□□□ -0.29
C4A-256	ENST00000490663	GGTLC3	B5MD39	225 aa		13.25	□□□□□ -0.29
C4A-256	ENST00000490663	MAP1LC3B	Q9GZQ8	125 aa		13.25	□□□□□ -0.29
C4A-256	ENST00000490663	SACS	Q9NZJ4	4579 aa		13.24	□□□□□ -0.29
C4A-256	ENST00000490663	TMEM189	A5PLL7	270 aa		13.24	□□□□□ -0.29
C4A-256	ENST00000490663	KLLN	B2CW77	178 aa		13.24	□□□□□ -0.29
C4A-256	ENST00000490663	C1QB	P02746	253 aa		13.24	□□□□□ -0.29
C4A-256	ENST00000490663	GPX1	P07203	203 aa		13.24	□□□□□ -0.29
C4A-256	ENST00000490663	SPART-AS1	P0CW21	52 aa		13.24	□□□□□ -0.29
C4A-256	ENST00000490663	TAS2R60	P59551	318 aa		13.24	□□□□□ -0.29
C4A-256	ENST00000490663	FAM213B	Q8TBF2	198 aa		13.24	□□□□□ -0.29
C4A-256	ENST00000490663	SUN5	Q8TC36	379 aa		13.24	□□□□□ -0.29
C4A-256	ENST00000490663	TMED6	Q8WW62	240 aa		13.24	□□□□□ -0.29
C4A-256	ENST00000490663	NIPSNAP3B	Q9BS92	247 aa		13.24	□□□□□ -0.29
C4A-256	ENST00000490663	DNAH1	Q9P2D7	4330 aa		13.23	□□□□□ -0.29
C4A-256	ENST00000490663	LCE6A	A0A183	80 aa		13.23	□□□□□ -0.29
C4A-256	ENST00000490663		H7BYZ3	331 aa		13.23	□□□□□ -0.29
C4A-256	ENST00000490663	HTN3	P15516	51 aa		13.23	□□□□□ -0.29
C4A-256	ENST00000490663	CRISP2	P16562	243 aa		13.23	□□□□□ -0.29
C4A-256	ENST00000490663	FAM74A1	Q5RGS3	127 aa		13.23	□□□□□ -0.29
C4A-256	ENST00000490663	RXFP4	Q8TDU9	374 aa		13.23	□□□□□ -0.29
C4A-256	ENST00000490663	TMEM167B	Q9NRX6	74 aa		13.23	□□□□□ -0.29
C4A-256	ENST00000490663	KLK5	Q9Y337	293 aa	Predicted RBP	13.23	□□□□□ -0.29
C4A-256	ENST00000490663	RYR3	Q15413	4870 aa		13.22	□□□□□ -0.29
C4A-256	ENST00000490663	TRAV10	A0A0B4J240	114 aa		13.22	□□□□□ -0.29
C4A-256	ENST00000490663	RBAKDN	A6NC62	111 aa		13.22	□□□□□ -0.29
C4A-256	ENST00000490663		F6UZH7	168 aa		13.22	□□□□□ -0.29
C4A-256	ENST00000490663	SUMO1	P63165	101 aa	Known RBP	13.22	□□□□□ -0.29
C4A-256	ENST00000490663	RNASE8	Q8TDE3	154 aa	Known RBP	13.22	□□□□□ -0.29
C4A-256	ENST00000490663	C20orf144	Q9BQM9	153 aa		13.22	□□□□□ -0.29
C4A-256	ENST00000490663	DEFB131B	A0A096LNP1	70 aa		13.21	□□□□□ -0.29
C4A-256	ENST00000490663	IGLL5	B9A064	214 aa		13.21	□□□□□ -0.29
C4A-256	ENST00000490663	SEC11B	P0C7V7	166 aa		13.21	□□□□□ -0.29
C4A-256	ENST00000490663	TPT1	P13693	172 aa	Known RBP	13.21	□□□□□ -0.29
C4A-256	ENST00000490663	DAD1	P61803	113 aa		13.21	□□□□□ -0.29
C4A-256	ENST00000490663	C2CD4C	Q8TF44	421 aa		13.21	□□□□□ -0.29
C4A-256	ENST00000490663	TVP23C	Q96ET8	276 aa		13.21	□□□□□ -0.29
C4A-256	ENST00000490663	C16orf74	Q96GX8	76 aa		13.21	□□□□□ -0.29
C4A-256	ENST00000490663	MUC4	Q99102	2169 aa		13.2	□□□□□ -0.3
C4A-256	ENST00000490663	ZNF324	O75467	553 aa	Predicted RBP	13.2	□□□□□ -0.3
C4A-256	ENST00000490663	DEFB130B	P0DP73	79 aa		13.2	□□□□□ -0.3
C4A-256	ENST00000490663	DEFB130A	P0DP74	79 aa		13.2	□□□□□ -0.3
C4A-256	ENST00000490663	C5orf17	Q8NAS9	161 aa		13.2	□□□□□ -0.3
C4A-256	ENST00000490663	TMEM263	Q8WUH6	116 aa	Known RBP	13.2	□□□□□ -0.3
C4A-256	ENST00000490663	NOP10	Q9NPE3	64 aa	Known RBP	13.2	□□□□□ -0.3
C4A-256	ENST00000490663	TP53TG3	Q9ULZ0	132 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms