RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 LINC01587Q99440 93 aa8.78□□□□□ -1
SMARCD3-213ENST00000489503 ARPC5LQ9BPX5 153 aa8.78□□□□□ -1
SMARCD3-213ENST00000489503 YTHDF2Q9Y5A9 579 aaKnown RBP8.78□□□□□ -1
SMARCD3-213ENST00000489503 LYSTQ99698 3801 aa8.77□□□□□ -1
SMARCD3-213ENST00000489503 GCHFRP30047 84 aa8.77□□□□□ -1.01
SMARCD3-213ENST00000489503 TSPOP30536 169 aa8.77□□□□□ -1.01
SMARCD3-213ENST00000489503 GNG5P63218 68 aa8.77□□□□□ -1.01
SMARCD3-213ENST00000489503 SERF2P84101 59 aa8.77□□□□□ -1.01
SMARCD3-213ENST00000489503 CD300CQ08708 224 aa8.77□□□□□ -1.01
SMARCD3-213ENST00000489503 ZNF345Q14585 488 aa8.77□□□□□ -1.01
SMARCD3-213ENST00000489503 IQCF2Q8IXL9 164 aa8.77□□□□□ -1.01
SMARCD3-213ENST00000489503 ODF3Q96PU9 254 aa8.77□□□□□ -1.01
SMARCD3-213ENST00000489503 ACTR3CQ9C0K3 210 aaPredicted RBP8.77□□□□□ -1.01
SMARCD3-213ENST00000489503 OTORQ9NRC9 128 aa8.77□□□□□ -1.01
SMARCD3-213ENST00000489503 PGPA6NDG6 321 aa8.76□□□□□ -1.01
SMARCD3-213ENST00000489503 HMSDA8MTL9 139 aa8.76□□□□□ -1.01
SMARCD3-213ENST00000489503 TAAR5O14804 337 aa8.76□□□□□ -1.01
SMARCD3-213ENST00000489503 BCL2L11O43521 198 aa8.76□□□□□ -1.01
SMARCD3-213ENST00000489503 JTBO76095 146 aa8.76□□□□□ -1.01
SMARCD3-213ENST00000489503 MBP02144 154 aa8.76□□□□□ -1.01
SMARCD3-213ENST00000489503 FGF8P55075 233 aaPredicted RBP8.76□□□□□ -1.01
SMARCD3-213ENST00000489503 TMEM78Q5T7P6 136 aa8.76□□□□□ -1.01
SMARCD3-213ENST00000489503 Q6ZQT7 251 aa8.76□□□□□ -1.01
SMARCD3-213ENST00000489503 C9orf47Q6ZRZ4 202 aa8.76□□□□□ -1.01
SMARCD3-213ENST00000489503 FAM19A4Q96LR4 140 aa8.76□□□□□ -1.01
SMARCD3-213ENST00000489503 DKK2Q9UBU2 259 aa8.76□□□□□ -1.01
SMARCD3-213ENST00000489503 PLAC8L1A1L4L8 177 aa8.75□□□□□ -1.01
SMARCD3-213ENST00000489503 C7orf71A4D174 169 aa8.75□□□□□ -1.01
SMARCD3-213ENST00000489503 TMEM189A5PLL7 270 aa8.75□□□□□ -1.01
SMARCD3-213ENST00000489503 DIRC3C9JPN6 131 aa8.75□□□□□ -1.01
SMARCD3-213ENST00000489503 SPART-AS1P0CW21 52 aa8.75□□□□□ -1.01
SMARCD3-213ENST00000489503 RNASE4P34096 147 aaKnown RBP8.75□□□□□ -1.01
SMARCD3-213ENST00000489503 CSN1S1P47710 185 aa8.75□□□□□ -1.01
SMARCD3-213ENST00000489503 AKR1C8PQ5T2L2 129 aa8.75□□□□□ -1.01
SMARCD3-213ENST00000489503 GOLT1AQ6ZVE7 132 aa8.75□□□□□ -1.01
SMARCD3-213ENST00000489503 LYPD1Q8N2G4 141 aa8.75□□□□□ -1.01
SMARCD3-213ENST00000489503 TMEM256Q8N2U0 113 aa8.75□□□□□ -1.01
SMARCD3-213ENST00000489503 ZFAND2AQ8N6M9 145 aa8.75□□□□□ -1.01
SMARCD3-213ENST00000489503 LINC00477Q96M19 166 aa8.75□□□□□ -1.01
SMARCD3-213ENST00000489503 ZNF471Q9BX82 626 aaPredicted RBP8.75□□□□□ -1.01
SMARCD3-213ENST00000489503 TMPRSS5Q9H3S3 457 aa8.75□□□□□ -1.01
SMARCD3-213ENST00000489503 ZNF492Q9P255 531 aa8.75□□□□□ -1.01
SMARCD3-213ENST00000489503 KLK5Q9Y337 293 aaPredicted RBP8.75□□□□□ -1.01
SMARCD3-213ENST00000489503 TRAV8-1A0A0A6YYK1 113 aa8.74□□□□□ -1.01
SMARCD3-213ENST00000489503 TRAV10A0A0B4J240 114 aa8.74□□□□□ -1.01
SMARCD3-213ENST00000489503 CTXND1A0A1B0GTU2 59 aa8.74□□□□□ -1.01
SMARCD3-213ENST00000489503 KANTRA0A1W2PQU2 76 aa8.74□□□□□ -1.01
SMARCD3-213ENST00000489503 KLLNB2CW77 178 aa8.74□□□□□ -1.01
SMARCD3-213ENST00000489503 GGTLC3B5MD39 225 aa8.74□□□□□ -1.01
SMARCD3-213ENST00000489503 H7BYZ3 331 aa8.74□□□□□ -1.01
SMARCD3-213ENST00000489503 SLC25A5P05141 298 aaKnown RBP8.74□□□□□ -1.01
SMARCD3-213ENST00000489503 HTN3P15516 51 aa8.74□□□□□ -1.01
SMARCD3-213ENST00000489503 FHITP49789 147 aa8.74□□□□□ -1.01
SMARCD3-213ENST00000489503 ZNF138P52744 262 aa8.74□□□□□ -1.01
SMARCD3-213ENST00000489503 TAS2R60P59551 318 aa8.74□□□□□ -1.01
SMARCD3-213ENST00000489503 TMUB2Q71RG4 321 aa8.74□□□□□ -1.01
SMARCD3-213ENST00000489503 CMTM2Q8TAZ6 248 aa8.74□□□□□ -1.01
SMARCD3-213ENST00000489503 DEFB131BA0A096LNP1 70 aa8.73□□□□□ -1.01
SMARCD3-213ENST00000489503 A0A0D9SG52 128 aa8.73□□□□□ -1.01
SMARCD3-213ENST00000489503 A0A1B0GVG6 124 aa8.73□□□□□ -1.01
SMARCD3-213ENST00000489503 IGLL5B9A064 214 aa8.73□□□□□ -1.01
SMARCD3-213ENST00000489503 PFDN1O60925 122 aa8.73□□□□□ -1.01
SMARCD3-213ENST00000489503 CXorf1O96002 111 aa8.73□□□□□ -1.01
SMARCD3-213ENST00000489503 GPX1P07203 203 aa8.73□□□□□ -1.01
SMARCD3-213ENST00000489503 CRISP2P16562 243 aa8.73□□□□□ -1.01
SMARCD3-213ENST00000489503 UBE2G2P60604 165 aa8.73□□□□□ -1.01
SMARCD3-213ENST00000489503 TCTE3Q8IZS6 198 aa8.73□□□□□ -1.01
SMARCD3-213ENST00000489503 RNASE8Q8TDE3 154 aaKnown RBP8.73□□□□□ -1.01
SMARCD3-213ENST00000489503 C2CD4CQ8TF44 421 aa8.73□□□□□ -1.01
SMARCD3-213ENST00000489503 LINC00476Q8WZB0 136 aa8.73□□□□□ -1.01
SMARCD3-213ENST00000489503 SGK494Q96LW2 274 aa8.73□□□□□ -1.01
SMARCD3-213ENST00000489503 C20orf144Q9BQM9 153 aa8.73□□□□□ -1.01
SMARCD3-213ENST00000489503 NIPSNAP3BQ9BS92 247 aa8.73□□□□□ -1.01
SMARCD3-213ENST00000489503 A0A1B0GV50 99 aa8.72□□□□□ -1.01
SMARCD3-213ENST00000489503 MAP1LC3B2A6NCE7 125 aa8.72□□□□□ -1.01
SMARCD3-213ENST00000489503 DAD1P61803 113 aa8.72□□□□□ -1.01
SMARCD3-213ENST00000489503 SUN5Q8TC36 379 aa8.72□□□□□ -1.01
SMARCD3-213ENST00000489503 RXFP4Q8TDU9 374 aa8.72□□□□□ -1.01
SMARCD3-213ENST00000489503 C16orf74Q96GX8 76 aa8.72□□□□□ -1.01
SMARCD3-213ENST00000489503 MAP1LC3BQ9GZQ8 125 aa8.72□□□□□ -1.01
SMARCD3-213ENST00000489503 TMEM167BQ9NRX6 74 aa8.72□□□□□ -1.01
SMARCD3-213ENST00000489503 VPS13DQ5THJ4 4388 aa8.72□□□□□ -1.01
SMARCD3-213ENST00000489503 RBAKDNA6NC62 111 aa8.71□□□□□ -1.02
SMARCD3-213ENST00000489503 C11orf94C9JXX5 98 aa8.71□□□□□ -1.02
SMARCD3-213ENST00000489503 F6UZH7 168 aa8.71□□□□□ -1.02
SMARCD3-213ENST00000489503 LY6G6CO95867 125 aa8.71□□□□□ -1.02
SMARCD3-213ENST00000489503 DEFB130BP0DP73 79 aa8.71□□□□□ -1.02
SMARCD3-213ENST00000489503 DEFB130AP0DP74 79 aa8.71□□□□□ -1.02
SMARCD3-213ENST00000489503 LGALSLQ3ZCW2 172 aaPredicted RBP8.71□□□□□ -1.02
SMARCD3-213ENST00000489503 FAM74A1Q5RGS3 127 aa8.71□□□□□ -1.02
SMARCD3-213ENST00000489503 AKAP14Q86UN6 197 aa8.71□□□□□ -1.02
SMARCD3-213ENST00000489503 FAM213BQ8TBF2 198 aa8.71□□□□□ -1.02
SMARCD3-213ENST00000489503 TMEM263Q8WUH6 116 aaKnown RBP8.71□□□□□ -1.02
SMARCD3-213ENST00000489503 TMED6Q8WW62 240 aa8.71□□□□□ -1.02
SMARCD3-213ENST00000489503 NOP10Q9NPE3 64 aaKnown RBP8.71□□□□□ -1.02
SMARCD3-213ENST00000489503 HYDINQ4G0P3 5121 aa8.7□□□□□ -1.02
SMARCD3-213ENST00000489503 IGHV4-4A0A075B6R2 117 aa8.7□□□□□ -1.02
SMARCD3-213ENST00000489503 TEX48A0A1B0GUV7 120 aa8.7□□□□□ -1.02
SMARCD3-213ENST00000489503 ZNF324O75467 553 aaPredicted RBP8.7□□□□□ -1.02
SMARCD3-213ENST00000489503 TCRAP04437 139 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms