RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 IGHV4-4A0A075B6R2 117 aa10.2□□□□□ -0.78
BRCA1-218ENST00000489037 ATP6V0CP27449 155 aa10.2□□□□□ -0.78
BRCA1-218ENST00000489037 CDC34P49427 236 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-218ENST00000489037 C9orf47Q6ZRZ4 202 aa10.2□□□□□ -0.78
BRCA1-218ENST00000489037 CMTM2Q8TAZ6 248 aa10.2□□□□□ -0.78
BRCA1-218ENST00000489037 RXFP4Q8TDU9 374 aa10.2□□□□□ -0.78
BRCA1-218ENST00000489037 AGPAT4-IT1Q9H0P7 198 aa10.2□□□□□ -0.78
BRCA1-218ENST00000489037 IGKV2-40A0A087WW87 121 aaPredicted RBP10.19□□□□□ -0.78
BRCA1-218ENST00000489037 TRAV12-3A0A0B4J271 114 aa10.19□□□□□ -0.78
BRCA1-218ENST00000489037 IGKV2D-40P01614 121 aaPredicted RBP10.19□□□□□ -0.78
BRCA1-218ENST00000489037 PRM2P04554 102 aa10.19□□□□□ -0.78
BRCA1-218ENST00000489037 GPX1P07203 203 aa10.19□□□□□ -0.78
BRCA1-218ENST00000489037 HTN3P15516 51 aa10.19□□□□□ -0.78
BRCA1-218ENST00000489037 AZU1P20160 251 aa10.19□□□□□ -0.78
BRCA1-218ENST00000489037 TMEM263Q8WUH6 116 aaKnown RBP10.19□□□□□ -0.78
BRCA1-218ENST00000489037 ZNF503Q96F45 646 aa10.19□□□□□ -0.78
BRCA1-218ENST00000489037 PYGO2Q9BRQ0 406 aa10.19□□□□□ -0.78
BRCA1-218ENST00000489037 NDUFAF3Q9BU61 184 aa10.19□□□□□ -0.78
BRCA1-218ENST00000489037 APLNQ9ULZ1 77 aa10.19□□□□□ -0.78
BRCA1-218ENST00000489037 TIMM8BQ9Y5J9 83 aaPredicted RBP10.19□□□□□ -0.78
BRCA1-218ENST00000489037 C7orf71A4D174 169 aa10.18□□□□□ -0.78
BRCA1-218ENST00000489037 RBAKDNA6NC62 111 aa10.18□□□□□ -0.78
BRCA1-218ENST00000489037 RNF222A6NCQ9 220 aa10.18□□□□□ -0.78
BRCA1-218ENST00000489037 TAAR5O14804 337 aa10.18□□□□□ -0.78
BRCA1-218ENST00000489037 NMBP08949 121 aa10.18□□□□□ -0.78
BRCA1-218ENST00000489037 KIR3DS1Q14943 382 aa10.18□□□□□ -0.78
BRCA1-218ENST00000489037 RPL7L1Q6DKI1 246 aaKnown RBP10.18□□□□□ -0.78
BRCA1-218ENST00000489037 FAM210BQ96KR6 192 aa10.18□□□□□ -0.78
BRCA1-218ENST00000489037 HYLS1Q96M11 299 aa10.18□□□□□ -0.78
BRCA1-218ENST00000489037 ACTR3CQ9C0K3 210 aaPredicted RBP10.18□□□□□ -0.78
BRCA1-218ENST00000489037 OTORQ9NRC9 128 aa10.18□□□□□ -0.78
BRCA1-218ENST00000489037 PLA2G2EQ9NZK7 142 aa10.18□□□□□ -0.78
BRCA1-218ENST00000489037 PGPA6NDG6 321 aa10.17□□□□□ -0.78
BRCA1-218ENST00000489037 SNURFLB1AK76 121 aa10.17□□□□□ -0.78
BRCA1-218ENST00000489037 HMGB3O15347 200 aaKnown RBP10.17□□□□□ -0.78
BRCA1-218ENST00000489037 ARPC5O15511 151 aa10.17□□□□□ -0.78
BRCA1-218ENST00000489037 EIF3GO75821 320 aaKnown RBP eCLIP10.17□□□□□ -0.78
BRCA1-218ENST00000489037 DEFB130BP0DP73 79 aa10.17□□□□□ -0.78
BRCA1-218ENST00000489037 DEFB130AP0DP74 79 aa10.17□□□□□ -0.78
BRCA1-218ENST00000489037 RNASE4P34096 147 aaKnown RBP10.17□□□□□ -0.78
BRCA1-218ENST00000489037 ZNF138P52744 262 aa10.17□□□□□ -0.78
BRCA1-218ENST00000489037 VGLL1Q99990 258 aa10.17□□□□□ -0.78
BRCA1-218ENST00000489037 ZNF492Q9P255 531 aa10.17□□□□□ -0.78
BRCA1-218ENST00000489037 TRBV7-9A0A0J9YWB2 115 aa10.16□□□□□ -0.78
BRCA1-218ENST00000489037 KLLNB2CW77 178 aa10.16□□□□□ -0.78
BRCA1-218ENST00000489037 DIRC3C9JPN6 131 aa10.16□□□□□ -0.78
BRCA1-218ENST00000489037 STAG3L2P0CL84 134 aa10.16□□□□□ -0.78
BRCA1-218ENST00000489037 STAG3L3P0CL85 134 aa10.16□□□□□ -0.78
BRCA1-218ENST00000489037 ARL14EPLP0DKL9 152 aa10.16□□□□□ -0.78
BRCA1-218ENST00000489037 CRISP2P16562 243 aa10.16□□□□□ -0.78
BRCA1-218ENST00000489037 RAB24Q969Q5 203 aa10.16□□□□□ -0.78
BRCA1-218ENST00000489037 FAM19A4Q96LR4 140 aa10.16□□□□□ -0.78
BRCA1-218ENST00000489037 SH3BGRL3Q9H299 93 aa10.16□□□□□ -0.78
BRCA1-218ENST00000489037 NOP10Q9NPE3 64 aaKnown RBP10.16□□□□□ -0.78
BRCA1-218ENST00000489037 RPH3ALQ9UNE2 315 aa10.16□□□□□ -0.78
BRCA1-218ENST00000489037 DNAH1Q9P2D7 4330 aa10.16□□□□□ -0.78
BRCA1-218ENST00000489037 CXorf1O96002 111 aa10.15□□□□□ -0.78
BRCA1-218ENST00000489037 BTN1A1Q13410 526 aa10.15□□□□□ -0.78
BRCA1-218ENST00000489037 AKR1C8PQ5T2L2 129 aa10.15□□□□□ -0.78
BRCA1-218ENST00000489037 ARL6IP6Q8N6S5 226 aa10.15□□□□□ -0.78
BRCA1-218ENST00000489037 RNASE8Q8TDE3 154 aaKnown RBP10.15□□□□□ -0.78
BRCA1-218ENST00000489037 TMEM167BQ9NRX6 74 aa10.15□□□□□ -0.78
BRCA1-218ENST00000489037 PLAC8L1A1L4L8 177 aa10.14□□□□□ -0.79
BRCA1-218ENST00000489037 CBY3A6NI87 242 aa10.14□□□□□ -0.79
BRCA1-218ENST00000489037 RGS13O14921 159 aa10.14□□□□□ -0.79
BRCA1-218ENST00000489037 ATP5G1P05496 136 aa10.14□□□□□ -0.79
BRCA1-218ENST00000489037 ATP5G3P48201 142 aa10.14□□□□□ -0.79
BRCA1-218ENST00000489037 CD300CQ08708 224 aa10.14□□□□□ -0.79
BRCA1-218ENST00000489037 IQCF2Q8IXL9 164 aa10.14□□□□□ -0.79
BRCA1-218ENST00000489037 EIF4E3Q8N5X7 224 aaKnown RBP10.14□□□□□ -0.79
BRCA1-218ENST00000489037 ZNF680Q8NEM1 530 aa10.14□□□□□ -0.79
BRCA1-218ENST00000489037 LENEPQ9Y5L5 61 aa10.14□□□□□ -0.79
BRCA1-218ENST00000489037 HYDINQ4G0P3 5121 aa10.14□□□□□ -0.79
BRCA1-218ENST00000489037 G3V3Q6 166 aa10.13□□□□□ -0.79
BRCA1-218ENST00000489037 SMLR1H3BR10 107 aa10.13□□□□□ -0.79
BRCA1-218ENST00000489037 K7EQM0 130 aa10.13□□□□□ -0.79
BRCA1-218ENST00000489037 P0DMU3 169 aa10.13□□□□□ -0.79
BRCA1-218ENST00000489037 FAM231AP0DMU4 169 aa10.13□□□□□ -0.79
BRCA1-218ENST00000489037 FAM231CP0DMU5 169 aa10.13□□□□□ -0.79
BRCA1-218ENST00000489037 GCHFRP30047 84 aa10.13□□□□□ -0.79
BRCA1-218ENST00000489037 Q8TAT8 98 aa10.13□□□□□ -0.79
BRCA1-218ENST00000489037 TMED6Q8WW62 240 aa10.13□□□□□ -0.79
BRCA1-218ENST00000489037 ARPC5LQ9BPX5 153 aa10.13□□□□□ -0.79
BRCA1-218ENST00000489037 LINC00467Q9BRT7 94 aa10.13□□□□□ -0.79
BRCA1-218ENST00000489037 CTXND1A0A1B0GTU2 59 aa10.12□□□□□ -0.79
BRCA1-218ENST00000489037 SERTM2A0A1B0GWG4 89 aa10.12□□□□□ -0.79
BRCA1-218ENST00000489037 F5H768 121 aa10.12□□□□□ -0.79
BRCA1-218ENST00000489037 ZNF324O75467 553 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-218ENST00000489037 GOLT1AQ6ZVE7 132 aa10.12□□□□□ -0.79
BRCA1-218ENST00000489037 ZFAND2AQ8N6M9 145 aa10.12□□□□□ -0.79
BRCA1-218ENST00000489037 ST6GAL2Q96JF0 529 aa10.12□□□□□ -0.79
BRCA1-218ENST00000489037 IGHV1OR15-1A0A075B7D0 117 aa10.11□□□□□ -0.79
BRCA1-218ENST00000489037 A0A0D9SG52 128 aa10.11□□□□□ -0.79
BRCA1-218ENST00000489037 HMSDA8MTL9 139 aa10.11□□□□□ -0.79
BRCA1-218ENST00000489037 ZNF345Q14585 488 aa10.11□□□□□ -0.79
BRCA1-218ENST00000489037 ANXA2RQ3ZCQ2 193 aa10.11□□□□□ -0.79
BRCA1-218ENST00000489037 TMEM88Q6PEY1 159 aa10.11□□□□□ -0.79
BRCA1-218ENST00000489037 UBE2DNLQ8IWF7 75 aa10.11□□□□□ -0.79
BRCA1-218ENST00000489037 KCNRGQ8N5I3 272 aa10.11□□□□□ -0.79
BRCA1-218ENST00000489037 C15orf53Q8NAA6 179 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms