RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 ZNF474Q6S9Z5 364 aaPredicted RBP6.1□□□□□ -1.43
COL6A4P1-202ENST00000487147 OR10J6PQ8NGY7 276 aa6.1□□□□□ -1.43
COL6A4P1-202ENST00000487147 JMJD8Q96S16 334 aa6.1□□□□□ -1.43
COL6A4P1-202ENST00000487147 MLST8Q9BVC4 326 aa6.1□□□□□ -1.43
COL6A4P1-202ENST00000487147 TTTY13Q9BZ97 58 aa6.1□□□□□ -1.43
COL6A4P1-202ENST00000487147 BEX4Q9NWD9 120 aaPredicted RBP6.1□□□□□ -1.43
COL6A4P1-202ENST00000487147 TRBV25-1A0A075B6N4 114 aa6.09□□□□□ -1.43
COL6A4P1-202ENST00000487147 MRPL35Q9NZE8 188 aaKnown RBP6.09□□□□□ -1.43
COL6A4P1-202ENST00000487147 COL5A1P20908 1838 aaPredicted RBP6.09□□□□□ -1.43
COL6A4P1-202ENST00000487147 TMEM262E9PQX1 116 aa6.09□□□□□ -1.43
COL6A4P1-202ENST00000487147 H7C1H1 209 aa6.09□□□□□ -1.43
COL6A4P1-202ENST00000487147 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.09□□□□□ -1.43
COL6A4P1-202ENST00000487147 EXPH5Q8NEV8 1989 aa6.09□□□□□ -1.43
COL6A4P1-202ENST00000487147 LAMA2P24043 3122 aaKnown RBP6.09□□□□□ -1.43
COL6A4P1-202ENST00000487147 WFDC2Q14508 124 aa6.09□□□□□ -1.43
COL6A4P1-202ENST00000487147 ZFAND6Q6FIF0 208 aa6.09□□□□□ -1.43
COL6A4P1-202ENST00000487147 SYT8Q8NBV8 401 aa6.09□□□□□ -1.43
COL6A4P1-202ENST00000487147 PRR25Q96S07 402 aa6.09□□□□□ -1.43
COL6A4P1-202ENST00000487147 KIR2DL4Q99706 377 aa6.09□□□□□ -1.43
COL6A4P1-202ENST00000487147 FAM90A27PA6NNH2 459 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 LHBP01229 141 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 LOXL1Q08397 574 aaPredicted RBP6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 IGLV3-9A0A075B6K5 115 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 IGKV1D-37A0A075B6S9 117 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 VWC2LB2RUY7 222 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 K7EM74 188 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 COX6CP09669 75 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 FAM106CPP0CH98 169 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 C12orf74Q32Q52 190 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 FAM106AQ4KMX7 169 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 TCTEX1D4Q5JR98 221 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 RNASE6Q93091 150 aaKnown RBP6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 CHD7Q9P2D1 2997 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 H3BRN7 92 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 SLC50A1Q9BRV3 221 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 MBD3L4A6NDZ8 208 aaPredicted RBP6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 MBD3L3A6NE82 208 aaPredicted RBP6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 MBD3L5A6NJ08 208 aaPredicted RBP6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 LYNX1G3V0Z9 82 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 K7EMI3 77 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 CGB3P0DN86 165 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 CGB7P0DN87 165 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 LYNX1P0DP58 116 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 C2orf91Q6ZV80 131 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 LINC00311Q8N616 119 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 MBD3L2Q8NHZ7 208 aaPredicted RBP6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 URB1-AS1Q96HZ7 61 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 FAM110AQ9BQ89 295 aa6.08□□□□□ -1.44
COL6A4P1-202ENST00000487147 TANC2Q9HCD6 1990 aa6.07□□□□□ -1.44
COL6A4P1-202ENST00000487147 IGLL5B9A064 214 aa6.07□□□□□ -1.44
COL6A4P1-202ENST00000487147 BUB1B-PAK6H3BSN5 160 aa6.07□□□□□ -1.44
COL6A4P1-202ENST00000487147 PPP1R17O96001 155 aa6.07□□□□□ -1.44
COL6A4P1-202ENST00000487147 FOXI2Q6ZQN5 318 aa6.07□□□□□ -1.44
COL6A4P1-202ENST00000487147 Q8N8P6 123 aa6.07□□□□□ -1.44
COL6A4P1-202ENST00000487147 INS-IGF2F8WCM5 200 aa6.07□□□□□ -1.44
COL6A4P1-202ENST00000487147 ASIPP42127 132 aa6.07□□□□□ -1.44
COL6A4P1-202ENST00000487147 TEX36Q5VZQ5 186 aa6.07□□□□□ -1.44
COL6A4P1-202ENST00000487147 OR13C6PQ8NH95 151 aa6.07□□□□□ -1.44
COL6A4P1-202ENST00000487147 LAMA3Q16787 3333 aa6.07□□□□□ -1.44
COL6A4P1-202ENST00000487147 LINC01549A6NIU2 74 aa6.07□□□□□ -1.44
COL6A4P1-202ENST00000487147 EGR2P11161 476 aaPredicted RBP6.07□□□□□ -1.44
COL6A4P1-202ENST00000487147 RPL32P62910 135 aaKnown RBP6.07□□□□□ -1.44
COL6A4P1-202ENST00000487147 TAL2Q16559 108 aa6.07□□□□□ -1.44
COL6A4P1-202ENST00000487147 TMEM155Q4W5P6 130 aa6.07□□□□□ -1.44
COL6A4P1-202ENST00000487147 PAPPA-AS1Q5QFB9 102 aa6.07□□□□□ -1.44
COL6A4P1-202ENST00000487147 SIGLEC15Q6ZMC9 328 aa6.07□□□□□ -1.44
COL6A4P1-202ENST00000487147 DEFB123Q8N688 67 aa6.07□□□□□ -1.44
COL6A4P1-202ENST00000487147 ZNF491Q8N8L2 437 aa6.07□□□□□ -1.44
COL6A4P1-202ENST00000487147 RNF5Q99942 180 aa6.07□□□□□ -1.44
COL6A4P1-202ENST00000487147 GAGE2BQ13066 116 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 ERCC8Q13216 396 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 GAGE2EQ4V326 116 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 GAGE2DQ9UEU5 116 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 GAGE12JA6NER3 117 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 GAGE7O76087 117 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 GAGE12FP0CL80 117 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 GAGE12GP0CL81 117 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 GAGE12IP0CL82 117 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 GAGE4Q13068 117 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 IGF2-ASQ6U949 168 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 CLEC19AQ6UXS0 136 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 HIGD1BQ9P298 99 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 NCKAP5O14513 1909 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 PRTN3P24158 256 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 MSMPQ1L6U9 139 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 RRN3P1Q2M238 152 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 RNF183Q96D59 192 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 ZNF256Q9Y2P7 627 aaPredicted RBP6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 IGKV1-17P01599 117 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 CD59P13987 128 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 LOXP28300 417 aaPredicted RBP6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 EFNA4P52798 201 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 FAM74A4Q5TZK3 123 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 DTX2Q86UW9 622 aa6.06□□□□□ -1.44
COL6A4P1-202ENST00000487147 MYMXA0A1B0GTQ4 84 aa6.05□□□□□ -1.44
COL6A4P1-202ENST00000487147 M0QXV9 152 aa6.05□□□□□ -1.44
COL6A4P1-202ENST00000487147 NUP37Q8NFH4 326 aa6.05□□□□□ -1.44
COL6A4P1-202ENST00000487147 EEF1AKMT3Q96AZ1 226 aa6.05□□□□□ -1.44
COL6A4P1-202ENST00000487147 RITA1Q96K30 269 aa6.05□□□□□ -1.44
COL6A4P1-202ENST00000487147 NOTCH3Q9UM47 2321 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms