RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-205	ENST00000486941	RBKS	Q9H477	322 aa		2.72	□□□□□ -1.97
SNRNP40-205	ENST00000486941		Q9H8V8	135 aa		2.72	□□□□□ -1.97
SNRNP40-205	ENST00000486941	RABL2A	Q9UBK7	228 aa	Predicted RBP	2.72	□□□□□ -1.97
SNRNP40-205	ENST00000486941	SHPK	Q9UHJ6	478 aa		2.72	□□□□□ -1.97
SNRNP40-205	ENST00000486941	RABL2B	Q9UNT1	228 aa		2.72	□□□□□ -1.97
SNRNP40-205	ENST00000486941	LINC00588	Q9Y4M8	146 aa		2.72	□□□□□ -1.97
SNRNP40-205	ENST00000486941	LRP1B	Q9NZR2	4599 aa		2.72	□□□□□ -1.97
SNRNP40-205	ENST00000486941	IGKV1OR2-108	A0A075B7D4	117 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941		A0A1W2PPQ1	181 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	PLAC8L1	A1L4L8	177 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941		M0R2Z0	102 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	CTDSPL	O15194	276 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	PITX3	O75364	302 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	PRM2	P04554	102 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	AKAIN1	P0CW23	69 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	SLC25A6	P12236	298 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	ANXA3	P12429	323 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	AKR1C4	P17516	323 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	CNN1	P51911	297 aa	Known RBP	2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	TAS2R60	P59551	318 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	CTAG1A	P78358	180 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	SRPX	P78539	464 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	GAGE2B	Q13066	116 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	SPINK13	Q1W4C9	94 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	GAGE2E	Q4V326	116 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	TTC32	Q5I0X7	151 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	GAGE2A	Q6NT46	116 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	ZNF493	Q6ZR52	646 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	SSX7	Q7RTT5	188 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	LYZL2	Q7Z4W2	148 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	SPATA12	Q7Z6I5	190 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941		Q8NBF4	154 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	BPIFC	Q8NFQ6	507 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	OR51S1	Q8NGJ8	323 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	OR4C16	Q8NGL9	310 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	OR1S1	Q8NH92	325 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	SMIM4	Q8WVI0	70 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	SGK494	Q96LW2	274 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	LINC01587	Q99440	93 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	GAGE2D	Q9UEU5	116 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	SCP2D1	Q9UJQ7	156 aa		2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	APOB	P04114	4563 aa	Known RBP	2.71	□□□□□ -1.98
SNRNP40-205	ENST00000486941	DNAH5	Q8TE73	4624 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	FLG2	Q5D862	2391 aa	Predicted RBP	2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	TRAV8-2	A0A0B4J237	113 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	DUXB	A0A1W2PPF3	345 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	ANKRD20A5P	A0PJZ0	165 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	KLLN	B2CW77	178 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	PRSS46	E5RG02	174 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941		H3BNG1	76 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	BOLA2-SMG1P6	H3BVE0	249 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	CTDSP2	O14595	271 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	ATP6V1G1	O75348	118 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	MED6	O75586	246 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	ADAP1	O75689	374 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	RPL7	P18124	248 aa	Known RBP	2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	ORM2	P19652	201 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	PLP1	P60201	277 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	CLINT1	Q14677	625 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	SPCS2	Q15005	226 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	TMEM182	Q6ZP80	229 aa	Predicted RBP	2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	TMEM144	Q7Z5S9	345 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	CLVS1	Q8IUQ0	354 aa	Predicted RBP	2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	IQCF2	Q8IXL9	164 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	BAP18	Q8IXM2	172 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	LRTM2	Q8N967	370 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	OR8A1	Q8NGG7	326 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	OR10J6P	Q8NGY7	276 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	RXFP4	Q8TDU9	374 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	GNPNAT1	Q96EK6	184 aa	Predicted RBP	2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	C16orf74	Q96GX8	76 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	CIB3	Q96Q77	187 aa	Predicted RBP	2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	C20orf144	Q9BQM9	153 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	UPK3B	Q9BT76	320 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	TMEM147	Q9BVK8	224 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	MIXL1	Q9H2W2	232 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941		Q9H3A6	140 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	SLC25A22	Q9H936	323 aa		2.7	□□□□□ -1.98
SNRNP40-205	ENST00000486941	SRRM2	Q9UQ35	2752 aa	Known RBP	2.69	□□□□□ -1.98
SNRNP40-205	ENST00000486941	TRAV12-2	A0A075B6T6	113 aa		2.69	□□□□□ -1.98
SNRNP40-205	ENST00000486941	TRAV26-1	A0A087WT03	109 aa		2.69	□□□□□ -1.98
SNRNP40-205	ENST00000486941		A0A087X0K7	114 aa		2.69	□□□□□ -1.98
SNRNP40-205	ENST00000486941		H3BRN7	92 aa		2.69	□□□□□ -1.98
SNRNP40-205	ENST00000486941		H7BYZ3	331 aa		2.69	□□□□□ -1.98
SNRNP40-205	ENST00000486941	ZNF701	M0R085	212 aa	Predicted RBP	2.69	□□□□□ -1.98
SNRNP40-205	ENST00000486941	RGS5	O15539	181 aa		2.69	□□□□□ -1.98
SNRNP40-205	ENST00000486941	SYNGR2	O43760	224 aa		2.69	□□□□□ -1.98
SNRNP40-205	ENST00000486941	HYPM	O75409	117 aa		2.69	□□□□□ -1.98
SNRNP40-205	ENST00000486941	IAPP	P10997	89 aa		2.69	□□□□□ -1.98
SNRNP40-205	ENST00000486941	HTN1	P15515	57 aa		2.69	□□□□□ -1.98
SNRNP40-205	ENST00000486941	CXCL3	P19876	107 aa		2.69	□□□□□ -1.98
SNRNP40-205	ENST00000486941	M6PR	P20645	277 aa		2.69	□□□□□ -1.98
SNRNP40-205	ENST00000486941	CDKN1B	P46527	198 aa		2.69	□□□□□ -1.98
SNRNP40-205	ENST00000486941	SELENOT	P62341	195 aa		2.69	□□□□□ -1.98
SNRNP40-205	ENST00000486941	RHOB	P62745	196 aa		2.69	□□□□□ -1.98
SNRNP40-205	ENST00000486941	HIST1H1A	Q02539	215 aa	Predicted RBP	2.69	□□□□□ -1.98
SNRNP40-205	ENST00000486941	FGL1	Q08830	312 aa		2.69	□□□□□ -1.98
SNRNP40-205	ENST00000486941	OR5I1	Q13606	314 aa		2.69	□□□□□ -1.98

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