RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 PITX3O75364 302 aa3.36□□□□□ -1.87
PTPN4-210ENST00000485247 ATG12O94817 140 aa3.36□□□□□ -1.87
PTPN4-210ENST00000485247 SNRPCP09234 159 aaKnown RBP3.36□□□□□ -1.87
PTPN4-210ENST00000485247 CT45A10P0DMU9 189 aa3.36□□□□□ -1.87
PTPN4-210ENST00000485247 PGAM2P15259 253 aa3.36□□□□□ -1.87
PTPN4-210ENST00000485247 HLA-DMAP28067 261 aa3.36□□□□□ -1.87
PTPN4-210ENST00000485247 CAMPP49913 170 aa3.36□□□□□ -1.87
PTPN4-210ENST00000485247 MLLT11Q13015 90 aaPredicted RBP3.36□□□□□ -1.87
PTPN4-210ENST00000485247 SP6Q3SY56 376 aa3.36□□□□□ -1.87
PTPN4-210ENST00000485247 NMSQ5H8A3 153 aa3.36□□□□□ -1.87
PTPN4-210ENST00000485247 ZFP1Q6P2D0 407 aa3.36□□□□□ -1.87
PTPN4-210ENST00000485247 DAZ4Q86SG3 579 aaKnown RBP3.36□□□□□ -1.87
PTPN4-210ENST00000485247 IQCF2Q8IXL9 164 aa3.36□□□□□ -1.87
PTPN4-210ENST00000485247 C8orf59Q8N0T1 100 aaPredicted RBP3.36□□□□□ -1.87
PTPN4-210ENST00000485247 DHRSXQ8N5I4 330 aa3.36□□□□□ -1.87
PTPN4-210ENST00000485247 EIF4E3Q8N5X7 224 aaKnown RBP3.36□□□□□ -1.87
PTPN4-210ENST00000485247 OR5H6Q8NGV6 325 aa3.36□□□□□ -1.87
PTPN4-210ENST00000485247 SLC25A38Q96DW6 304 aa3.36□□□□□ -1.87
PTPN4-210ENST00000485247 SLC35E1Q96K37 410 aa3.36□□□□□ -1.87
PTPN4-210ENST00000485247 TRGV9Q99603 122 aa3.36□□□□□ -1.87
PTPN4-210ENST00000485247 TMEM147Q9BVK8 224 aa3.36□□□□□ -1.87
PTPN4-210ENST00000485247 DAZ3Q9NR90 486 aaKnown RBP3.36□□□□□ -1.87
PTPN4-210ENST00000485247 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.36□□□□□ -1.87
PTPN4-210ENST00000485247 TP53TG3Q9ULZ0 132 aa3.36□□□□□ -1.87
PTPN4-210ENST00000485247 PAM16Q9Y3D7 125 aa3.36□□□□□ -1.87
PTPN4-210ENST00000485247 IGKV2D-24A0A075B6R9 120 aa3.35□□□□□ -1.87
PTPN4-210ENST00000485247 C3orf85A0A1B0GTC6 90 aa3.35□□□□□ -1.87
PTPN4-210ENST00000485247 hDV102S1A0JD36 115 aa3.35□□□□□ -1.87
PTPN4-210ENST00000485247 RPL7P18124 248 aaKnown RBP3.35□□□□□ -1.87
PTPN4-210ENST00000485247 GPX4P36969 197 aaPredicted RBP3.35□□□□□ -1.87
PTPN4-210ENST00000485247 LEPP41159 167 aa3.35□□□□□ -1.87
PTPN4-210ENST00000485247 PIGPP57054 158 aa3.35□□□□□ -1.87
PTPN4-210ENST00000485247 TAS2R46P59540 309 aa3.35□□□□□ -1.87
PTPN4-210ENST00000485247 MEF2DQ14814 521 aa3.35□□□□□ -1.87
PTPN4-210ENST00000485247 AARDQ4LEZ3 155 aa3.35□□□□□ -1.87
PTPN4-210ENST00000485247 IBA57Q5T440 356 aaKnown RBP3.35□□□□□ -1.87
PTPN4-210ENST00000485247 GGNBP1Q5YKI7 109 aa3.35□□□□□ -1.87
PTPN4-210ENST00000485247 C22orf42Q6IC83 251 aa3.35□□□□□ -1.87
PTPN4-210ENST00000485247 FAM122CQ6P4D5 195 aa3.35□□□□□ -1.87
PTPN4-210ENST00000485247 TMEM182Q6ZP80 229 aaPredicted RBP3.35□□□□□ -1.87
PTPN4-210ENST00000485247 SH2D6Q7Z4S9 175 aa3.35□□□□□ -1.87
PTPN4-210ENST00000485247 LGI3Q8N145 548 aa3.35□□□□□ -1.87
PTPN4-210ENST00000485247 DPH3Q96FX2 82 aa3.35□□□□□ -1.87
PTPN4-210ENST00000485247 DNAJC30Q96LL9 226 aa3.35□□□□□ -1.87
PTPN4-210ENST00000485247 MGLLQ99685 303 aa3.35□□□□□ -1.87
PTPN4-210ENST00000485247 KIF25-AS1Q9Y6Z4 181 aa3.35□□□□□ -1.87
PTPN4-210ENST00000485247 A0A0A6YYH2 397 aa3.34□□□□□ -1.87
PTPN4-210ENST00000485247 TRAV8-1A0A0A6YYK1 113 aa3.34□□□□□ -1.87
PTPN4-210ENST00000485247 C7orf71A4D174 169 aa3.34□□□□□ -1.87
PTPN4-210ENST00000485247 A6NJ64 397 aa3.34□□□□□ -1.87
PTPN4-210ENST00000485247 GGTLC3B5MD39 225 aa3.34□□□□□ -1.87
PTPN4-210ENST00000485247 H3BRN7 92 aa3.34□□□□□ -1.87
PTPN4-210ENST00000485247 PHOX2AO14813 284 aa3.34□□□□□ -1.87
PTPN4-210ENST00000485247 CFDP00746 253 aaPredicted RBP3.34□□□□□ -1.87
PTPN4-210ENST00000485247 SLC25A5P05141 298 aaKnown RBP3.34□□□□□ -1.87
PTPN4-210ENST00000485247 ANXA7P20073 488 aaKnown RBP3.34□□□□□ -1.87
PTPN4-210ENST00000485247 S100A7P31151 101 aa3.34□□□□□ -1.87
PTPN4-210ENST00000485247 RNASE4P34096 147 aaKnown RBP3.34□□□□□ -1.87
PTPN4-210ENST00000485247 BTN1A1Q13410 526 aa3.34□□□□□ -1.87
PTPN4-210ENST00000485247 REG3GQ6UW15 175 aa3.34□□□□□ -1.87
PTPN4-210ENST00000485247 BPIFCQ8NFQ6 507 aa3.34□□□□□ -1.87
PTPN4-210ENST00000485247 OR10P1Q8NGE3 313 aa3.34□□□□□ -1.87
PTPN4-210ENST00000485247 RMI2Q96E14 147 aa3.34□□□□□ -1.87
PTPN4-210ENST00000485247 SSR3Q9UNL2 185 aa3.34□□□□□ -1.87
PTPN4-210ENST00000485247 U3KQ87 197 aa3.34□□□□□ -1.87
PTPN4-210ENST00000485247 A0A087X0K7 114 aa3.33□□□□□ -1.88
PTPN4-210ENST00000485247 IGHV3-16A0A0C4DH30 117 aa3.33□□□□□ -1.88
PTPN4-210ENST00000485247 TRDV1A0A1B0GX56 115 aa3.33□□□□□ -1.88
PTPN4-210ENST00000485247 PMS2P5A8MQ11 134 aa3.33□□□□□ -1.88
PTPN4-210ENST00000485247 H3BTX0 84 aa3.33□□□□□ -1.88
PTPN4-210ENST00000485247 CTDSP2O14595 271 aa3.33□□□□□ -1.88
PTPN4-210ENST00000485247 MPDU1O75352 247 aa3.33□□□□□ -1.88
PTPN4-210ENST00000485247 PFN1P07737 140 aaKnown RBP3.33□□□□□ -1.88
PTPN4-210ENST00000485247 RND3P61587 244 aa3.33□□□□□ -1.88
PTPN4-210ENST00000485247 VWC2Q2TAL6 325 aa3.33□□□□□ -1.88
PTPN4-210ENST00000485247 C14orf177Q52M58 125 aa3.33□□□□□ -1.88
PTPN4-210ENST00000485247 Q6ZQT7 251 aa3.33□□□□□ -1.88
PTPN4-210ENST00000485247 OR10G4Q8NGN3 311 aa3.33□□□□□ -1.88
PTPN4-210ENST00000485247 DTD1Q8TEA8 209 aa3.33□□□□□ -1.88
PTPN4-210ENST00000485247 ZC2HC1AQ96GY0 325 aa3.33□□□□□ -1.88
PTPN4-210ENST00000485247 ODF3Q96PU9 254 aa3.33□□□□□ -1.88
PTPN4-210ENST00000485247 SHANK2-AS3Q9BTD1 123 aa3.33□□□□□ -1.88
PTPN4-210ENST00000485247 S100A14Q9HCY8 104 aa3.33□□□□□ -1.88
PTPN4-210ENST00000485247 ZNF331Q9NQX6 463 aaPredicted RBP3.33□□□□□ -1.88
PTPN4-210ENST00000485247 SCN3BQ9NY72 215 aa3.33□□□□□ -1.88
PTPN4-210ENST00000485247 ANAPC10Q9UM13 185 aa3.33□□□□□ -1.88
PTPN4-210ENST00000485247 IGLV5-37A0A075B6J1 123 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 IGHV1OR15-1A0A075B7D0 117 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 FABP12A6NFH5 140 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 SLC17A3O00476 420 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 OR5G3P0C626 314 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 RCVRNP35243 200 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 PRR4Q16378 134 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 GPR107Q5VW38 600 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 LCN15Q6UWW0 184 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 SDIM1Q6ZPB5 146 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 C9orf163Q8N9P6 203 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 OR4C5Q8NGB2 326 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 OR1S1Q8NH92 325 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 LHFPL5Q8TAF8 219 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms