RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 C11orf94C9JXX5 98 aa11.6□□□□□ -0.55
DDR1-246ENST00000485023 CSN1S1P47710 185 aa11.6□□□□□ -0.55
DDR1-246ENST00000485023 TMEM78Q5T7P6 136 aa11.6□□□□□ -0.55
DDR1-246ENST00000485023 TMEM256Q8N2U0 113 aa11.6□□□□□ -0.55
DDR1-246ENST00000485023 RAB24Q969Q5 203 aa11.6□□□□□ -0.55
DDR1-246ENST00000485023 GNPNAT1Q96EK6 184 aaPredicted RBP11.6□□□□□ -0.55
DDR1-246ENST00000485023 ODF3Q96PU9 254 aa11.6□□□□□ -0.55
DDR1-246ENST00000485023 LY6G6CO95867 125 aa11.59□□□□□ -0.55
DDR1-246ENST00000485023 HTN3P15516 51 aa11.59□□□□□ -0.55
DDR1-246ENST00000485023 TAS2R60P59551 318 aa11.59□□□□□ -0.55
DDR1-246ENST00000485023 SERF2P84101 59 aa11.59□□□□□ -0.55
DDR1-246ENST00000485023 BTN1A1Q13410 526 aa11.59□□□□□ -0.55
DDR1-246ENST00000485023 PQLC2Q6ZP29 291 aa11.59□□□□□ -0.55
DDR1-246ENST00000485023 SSX7Q7RTT5 188 aa11.59□□□□□ -0.55
DDR1-246ENST00000485023 IQCF2Q8IXL9 164 aa11.59□□□□□ -0.55
DDR1-246ENST00000485023 OR11H4Q8NGC9 324 aa11.59□□□□□ -0.55
DDR1-246ENST00000485023 LINC00476Q8WZB0 136 aa11.59□□□□□ -0.55
DDR1-246ENST00000485023 DEFB131BA0A096LNP1 70 aa11.58□□□□□ -0.56
DDR1-246ENST00000485023 H7BYZ3 331 aa11.58□□□□□ -0.56
DDR1-246ENST00000485023 MBP02144 154 aa11.58□□□□□ -0.56
DDR1-246ENST00000485023 STAG3L2P0CL84 134 aa11.58□□□□□ -0.56
DDR1-246ENST00000485023 STAG3L3P0CL85 134 aa11.58□□□□□ -0.56
DDR1-246ENST00000485023 RNASE4P34096 147 aaKnown RBP11.58□□□□□ -0.56
DDR1-246ENST00000485023 C9orf47Q6ZRZ4 202 aa11.58□□□□□ -0.56
DDR1-246ENST00000485023 LYPD1Q8N2G4 141 aa11.58□□□□□ -0.56
DDR1-246ENST00000485023 LINC00477Q96M19 166 aa11.58□□□□□ -0.56
DDR1-246ENST00000485023 NIPSNAP3BQ9BS92 247 aa11.58□□□□□ -0.56
DDR1-246ENST00000485023 ACTR3CQ9C0K3 210 aaPredicted RBP11.58□□□□□ -0.56
DDR1-246ENST00000485023 OTORQ9NRC9 128 aa11.58□□□□□ -0.56
DDR1-246ENST00000485023 CYTL1Q9NRR1 136 aa11.58□□□□□ -0.56
DDR1-246ENST00000485023 C7orf71A4D174 169 aa11.57□□□□□ -0.56
DDR1-246ENST00000485023 PGPA6NDG6 321 aa11.57□□□□□ -0.56
DDR1-246ENST00000485023 TAAR5O14804 337 aa11.57□□□□□ -0.56
DDR1-246ENST00000485023 CD300CQ08708 224 aa11.57□□□□□ -0.56
DDR1-246ENST00000485023 PRR9Q5T870 116 aa11.57□□□□□ -0.56
DDR1-246ENST00000485023 CMTM2Q8TAZ6 248 aa11.57□□□□□ -0.56
DDR1-246ENST00000485023 ARPC5LQ9BPX5 153 aa11.57□□□□□ -0.56
DDR1-246ENST00000485023 C20orf144Q9BQM9 153 aa11.57□□□□□ -0.56
DDR1-246ENST00000485023 HYDINQ4G0P3 5121 aa11.57□□□□□ -0.56
DDR1-246ENST00000485023 TEX48A0A1B0GUV7 120 aa11.56□□□□□ -0.56
DDR1-246ENST00000485023 PLAC8L1A1L4L8 177 aa11.56□□□□□ -0.56
DDR1-246ENST00000485023 DIRC3C9JPN6 131 aa11.56□□□□□ -0.56
DDR1-246ENST00000485023 SLC25A5P05141 298 aaKnown RBP11.56□□□□□ -0.56
DDR1-246ENST00000485023 GPX1P07203 203 aa11.56□□□□□ -0.56
DDR1-246ENST00000485023 DEFB130BP0DP73 79 aa11.56□□□□□ -0.56
DDR1-246ENST00000485023 DEFB130AP0DP74 79 aa11.56□□□□□ -0.56
DDR1-246ENST00000485023 GCHFRP30047 84 aa11.56□□□□□ -0.56
DDR1-246ENST00000485023 ZNF138P52744 262 aa11.56□□□□□ -0.56
DDR1-246ENST00000485023 DAD1P61803 113 aa11.56□□□□□ -0.56
DDR1-246ENST00000485023 GNG5P63218 68 aa11.56□□□□□ -0.56
DDR1-246ENST00000485023 KCNRGQ8N5I3 272 aa11.56□□□□□ -0.56
DDR1-246ENST00000485023 C16orf74Q96GX8 76 aa11.56□□□□□ -0.56
DDR1-246ENST00000485023 FAM19A4Q96LR4 140 aa11.56□□□□□ -0.56
DDR1-246ENST00000485023 ZNF492Q9P255 531 aa11.56□□□□□ -0.56
DDR1-246ENST00000485023 hCG_2014768A0A024R1R8 64 aa11.55□□□□□ -0.56
DDR1-246ENST00000485023 IGHV4-4A0A075B6R2 117 aa11.55□□□□□ -0.56
DDR1-246ENST00000485023 KLLNB2CW77 178 aa11.55□□□□□ -0.56
DDR1-246ENST00000485023 ZNF345Q14585 488 aa11.55□□□□□ -0.56
DDR1-246ENST00000485023 ZNF726P1Q15940 193 aa11.55□□□□□ -0.56
DDR1-246ENST00000485023 FAM74A1Q5RGS3 127 aa11.55□□□□□ -0.56
DDR1-246ENST00000485023 AKR1C8PQ5T2L2 129 aa11.55□□□□□ -0.56
DDR1-246ENST00000485023 RNASE8Q8TDE3 154 aaKnown RBP11.55□□□□□ -0.56
DDR1-246ENST00000485023 RXFP4Q8TDU9 374 aa11.55□□□□□ -0.56
DDR1-246ENST00000485023 TMEM263Q8WUH6 116 aaKnown RBP11.55□□□□□ -0.56
DDR1-246ENST00000485023 HMSDA8MTL9 139 aa11.54□□□□□ -0.56
DDR1-246ENST00000485023 CXorf1O96002 111 aa11.54□□□□□ -0.56
DDR1-246ENST00000485023 CRISP2P16562 243 aa11.54□□□□□ -0.56
DDR1-246ENST00000485023 Q6ZQT7 251 aa11.54□□□□□ -0.56
DDR1-246ENST00000485023 GOLT1AQ6ZVE7 132 aa11.54□□□□□ -0.56
DDR1-246ENST00000485023 CCDC28AQ8IWP9 274 aa11.54□□□□□ -0.56
DDR1-246ENST00000485023 ZFAND2AQ8N6M9 145 aa11.54□□□□□ -0.56
DDR1-246ENST00000485023 ZNF471Q9BX82 626 aaPredicted RBP11.54□□□□□ -0.56
DDR1-246ENST00000485023 NOP10Q9NPE3 64 aaKnown RBP11.54□□□□□ -0.56
DDR1-246ENST00000485023 KANTRA0A1W2PQU2 76 aa11.53□□□□□ -0.56
DDR1-246ENST00000485023 LYRM9A8MSI8 78 aa11.53□□□□□ -0.56
DDR1-246ENST00000485023 BCL2L11O43521 198 aa11.53□□□□□ -0.56
DDR1-246ENST00000485023 FGF8P55075 233 aaPredicted RBP11.53□□□□□ -0.56
DDR1-246ENST00000485023 APLNQ9ULZ1 77 aa11.53□□□□□ -0.56
DDR1-246ENST00000485023 TRAV8-1A0A0A6YYK1 113 aa11.52□□□□□ -0.57
DDR1-246ENST00000485023 CTXND1A0A1B0GTU2 59 aa11.52□□□□□ -0.57
DDR1-246ENST00000485023 RBAKDNA6NC62 111 aa11.52□□□□□ -0.57
DDR1-246ENST00000485023 PFDN1O60925 122 aa11.52□□□□□ -0.57
DDR1-246ENST00000485023 Q6ZNX1 250 aa11.52□□□□□ -0.57
DDR1-246ENST00000485023 ZNF493Q6ZR52 646 aa11.52□□□□□ -0.57
DDR1-246ENST00000485023 ST6GAL2Q96JF0 529 aa11.52□□□□□ -0.57
DDR1-246ENST00000485023 SGK494Q96LW2 274 aa11.52□□□□□ -0.57
DDR1-246ENST00000485023 PYGO2Q9BRQ0 406 aa11.52□□□□□ -0.57
DDR1-246ENST00000485023 TMPRSS5Q9H3S3 457 aa11.52□□□□□ -0.57
DDR1-246ENST00000485023 TMEM167BQ9NRX6 74 aa11.52□□□□□ -0.57
DDR1-246ENST00000485023 TIMM8BQ9Y5J9 83 aaPredicted RBP11.52□□□□□ -0.57
DDR1-246ENST00000485023 A0A0D9SG52 128 aa11.51□□□□□ -0.57
DDR1-246ENST00000485023 CBY3A6NI87 242 aa11.51□□□□□ -0.57
DDR1-246ENST00000485023 ZNF324O75467 553 aaPredicted RBP11.51□□□□□ -0.57
DDR1-246ENST00000485023 UBE2G2P60604 165 aa11.51□□□□□ -0.57
DDR1-246ENST00000485023 MAP1LC3B2A6NCE7 125 aa11.5□□□□□ -0.57
DDR1-246ENST00000485023 SNURFLB1AK76 121 aa11.5□□□□□ -0.57
DDR1-246ENST00000485023 GGTLC3B5MD39 225 aa11.5□□□□□ -0.57
DDR1-246ENST00000485023 F6UZH7 168 aa11.5□□□□□ -0.57
DDR1-246ENST00000485023 RGS13O14921 159 aa11.5□□□□□ -0.57
DDR1-246ENST00000485023 FHITP49789 147 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms