RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 ZNF320A2RRD8 509 aa5.29□□□□□ -1.56
BRCA1-216ENST00000484087 ZNF705GA8MUZ8 300 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-216ENST00000484087 NDUFA4O00483 81 aa5.29□□□□□ -1.56
BRCA1-216ENST00000484087 MRPS12O15235 138 aaKnown RBP5.29□□□□□ -1.56
BRCA1-216ENST00000484087 GATCO43716 136 aaKnown RBP5.29□□□□□ -1.56
BRCA1-216ENST00000484087 IGLV1-40P01703 118 aa5.29□□□□□ -1.56
BRCA1-216ENST00000484087 IGHV3-11P01762 117 aa5.29□□□□□ -1.56
BRCA1-216ENST00000484087 KRTAP10-11P60412 298 aa5.29□□□□□ -1.56
BRCA1-216ENST00000484087 OR5I1Q13606 314 aa5.29□□□□□ -1.56
BRCA1-216ENST00000484087 SIGLEC15Q6ZMC9 328 aa5.29□□□□□ -1.56
BRCA1-216ENST00000484087 FAM231DQ6ZW35 169 aa5.29□□□□□ -1.56
BRCA1-216ENST00000484087 EXOC3-AS1Q8N2X6 119 aa5.29□□□□□ -1.56
BRCA1-216ENST00000484087 LINC00479Q96M42 142 aa5.29□□□□□ -1.56
BRCA1-216ENST00000484087 PYGO2Q9BRQ0 406 aa5.29□□□□□ -1.56
BRCA1-216ENST00000484087 SLC50A1Q9BRV3 221 aa5.29□□□□□ -1.56
BRCA1-216ENST00000484087 TRBV6-1A0A0K0K1D8 114 aa5.28□□□□□ -1.56
BRCA1-216ENST00000484087 BUB3O43684 328 aa5.28□□□□□ -1.56
BRCA1-216ENST00000484087 IGHG4P01861 327 aa5.28□□□□□ -1.56
BRCA1-216ENST00000484087 TRGC2P03986 189 aa5.28□□□□□ -1.56
BRCA1-216ENST00000484087 TYMSP04818 313 aa5.28□□□□□ -1.56
BRCA1-216ENST00000484087 PSMB8P28062 276 aa5.28□□□□□ -1.56
BRCA1-216ENST00000484087 BMI1P35226 326 aa5.28□□□□□ -1.56
BRCA1-216ENST00000484087 COX19Q49B96 90 aa5.28□□□□□ -1.56
BRCA1-216ENST00000484087 PRR27Q6MZM9 219 aa5.28□□□□□ -1.56
BRCA1-216ENST00000484087 GOLT1AQ6ZVE7 132 aa5.28□□□□□ -1.56
BRCA1-216ENST00000484087 TMEM75Q8N9X5 138 aa5.28□□□□□ -1.56
BRCA1-216ENST00000484087 CDIP1Q9H305 208 aa5.28□□□□□ -1.56
BRCA1-216ENST00000484087 SAV1Q9H4B6 383 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-216ENST00000484087 CLEC5AQ9NY25 188 aa5.28□□□□□ -1.56
BRCA1-216ENST00000484087 ZFP30Q9Y2G7 519 aa5.28□□□□□ -1.56
BRCA1-216ENST00000484087 COL7A1Q02388 2944 aa5.28□□□□□ -1.56
BRCA1-216ENST00000484087 IGHV3OR16-8A0A075B7F1 116 aa5.27□□□□□ -1.57
BRCA1-216ENST00000484087 A0A087X0K7 114 aa5.27□□□□□ -1.57
BRCA1-216ENST00000484087 DIRC3C9JPN6 131 aa5.27□□□□□ -1.57
BRCA1-216ENST00000484087 H3BS24 57 aa5.27□□□□□ -1.57
BRCA1-216ENST00000484087 SLC17A3O00476 420 aa5.27□□□□□ -1.57
BRCA1-216ENST00000484087 LTAP01374 205 aa5.27□□□□□ -1.57
BRCA1-216ENST00000484087 IGLV2-8P01709 118 aa5.27□□□□□ -1.57
BRCA1-216ENST00000484087 ELANEP08246 267 aa5.27□□□□□ -1.57
BRCA1-216ENST00000484087 CT45A10P0DMU9 189 aa5.27□□□□□ -1.57
BRCA1-216ENST00000484087 SLURP1P55000 103 aa5.27□□□□□ -1.57
BRCA1-216ENST00000484087 PSG3Q16557 428 aa5.27□□□□□ -1.57
BRCA1-216ENST00000484087 FAM106AQ4KMX7 169 aa5.27□□□□□ -1.57
BRCA1-216ENST00000484087 PRNTQ86SH4 94 aa5.27□□□□□ -1.57
BRCA1-216ENST00000484087 Q86TA4 180 aa5.27□□□□□ -1.57
BRCA1-216ENST00000484087 TMEM183AQ8IXX5 376 aa5.27□□□□□ -1.57
BRCA1-216ENST00000484087 NHLRC2Q8NBF2 726 aa5.27□□□□□ -1.57
BRCA1-216ENST00000484087 C17orf77Q96MU5 243 aa5.27□□□□□ -1.57
BRCA1-216ENST00000484087 RNASE7Q9H1E1 156 aaKnown RBP5.27□□□□□ -1.57
BRCA1-216ENST00000484087 ZNF492Q9P255 531 aa5.27□□□□□ -1.57
BRCA1-216ENST00000484087 PEF1Q9UBV8 284 aaKnown RBP5.27□□□□□ -1.57
BRCA1-216ENST00000484087 PSG8Q9UQ74 426 aa5.27□□□□□ -1.57
BRCA1-216ENST00000484087 V9GYV3 84 aa5.27□□□□□ -1.57
BRCA1-216ENST00000484087 DNAH9Q9NYC9 4486 aa5.27□□□□□ -1.57
BRCA1-216ENST00000484087 IGHV4OR15-8A0A075B7B6 117 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 A0A087WW49 117 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 CCL24O00175 119 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 P01737 135 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 FOXE3Q13461 319 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 SAPCD1Q5SSQ6 148 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 WDR73Q6P4I2 378 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 GBGT1Q8N5D6 347 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 OR11H1Q8NG94 326 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 SGK494Q96LW2 274 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 NDFIP1Q9BT67 221 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 MLST8Q9BVC4 326 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 ZNF331Q9NQX6 463 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-216ENST00000484087 TRAPPC1Q9Y5R8 145 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 IGHV3-66A0A0C4DH42 116 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 A8MWL6 223 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 M0R3E3 92 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 ZNF207O43670 478 aaKnown RBP5.26□□□□□ -1.57
BRCA1-216ENST00000484087 TRBV12-3P01733 135 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 MT-ND6P03923 174 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 TRGC1P0CF51 173 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 AKR1D1P51857 326 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 NDUFA6P56556 154 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 SNRPEP62304 92 aaKnown RBP5.26□□□□□ -1.57
BRCA1-216ENST00000484087 CT83Q5H943 113 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 KPRPQ5T749 579 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-216ENST00000484087 SAMD13Q5VXD3 122 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 C16orf54Q6UWD8 224 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 RNF152Q8N8N0 203 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 WFDC9Q8NEX5 89 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 NUDT10Q8NFP7 164 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 OR4B1Q8NGF8 309 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 MRAPQ8TCY5 172 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 MYOZ3Q8TDC0 251 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 C4orf3Q8WVX3 66 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 FRZBQ92765 325 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 MRPL53Q96EL3 112 aaKnown RBP5.26□□□□□ -1.57
BRCA1-216ENST00000484087 NUDT11Q96G61 164 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 RPP21Q9H633 154 aaKnown RBP5.26□□□□□ -1.57
BRCA1-216ENST00000484087 NAT8BQ9UHF3 227 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 UFC1Q9Y3C8 167 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 SELENOKQ9Y6D0 94 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 U3KQE9 123 aa5.26□□□□□ -1.57
BRCA1-216ENST00000484087 IGHV3OR16-13A0A075B7E8 117 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 IGHV3-49A0A0A0MS15 119 aa5.25□□□□□ -1.57
BRCA1-216ENST00000484087 TRAV8-1A0A0A6YYK1 113 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms