RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 Q6ZRN7 208 aaPredicted RBP4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 SELENOHQ8IZQ5 122 aaKnown RBP4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 TCTE3Q8IZS6 198 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 TMEM256Q8N2U0 113 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 TERB2Q8NHR7 220 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 DTD1Q8TEA8 209 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 GLYATL2Q8WU03 294 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 C17orf77Q96MU5 243 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 MED28Q9H204 178 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 RBKSQ9H477 322 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 NAA60Q9H7X0 242 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 VPS13BQ7Z7G8 4022 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 ANKRD20A5PA0PJZ0 165 aa4.1□□□□□ -1.75
SEMA3D-204ENST00000484038 C7orf66A4D0T2 115 aa4.1□□□□□ -1.75
SEMA3D-204ENST00000484038 ZNF98A6NK75 572 aa4.1□□□□□ -1.75
SEMA3D-204ENST00000484038 PRAC2D3DTV9 90 aa4.1□□□□□ -1.75
SEMA3D-204ENST00000484038 RAB3DO95716 219 aa4.1□□□□□ -1.75
SEMA3D-204ENST00000484038 DNAH10OSP0CZ25 163 aa4.1□□□□□ -1.75
SEMA3D-204ENST00000484038 ORM2P19652 201 aa4.1□□□□□ -1.75
SEMA3D-204ENST00000484038 CXCL3P19876 107 aa4.1□□□□□ -1.75
SEMA3D-204ENST00000484038 TBPP20226 339 aa4.1□□□□□ -1.75
SEMA3D-204ENST00000484038 GPX4P36969 197 aaPredicted RBP4.1□□□□□ -1.75
SEMA3D-204ENST00000484038 KRTAP10-1P60331 282 aa4.1□□□□□ -1.75
SEMA3D-204ENST00000484038 FAM122CQ6P4D5 195 aa4.1□□□□□ -1.75
SEMA3D-204ENST00000484038 CFAP161Q6P656 301 aa4.1□□□□□ -1.75
SEMA3D-204ENST00000484038 OR1B1Q8NGR6 318 aa4.1□□□□□ -1.75
SEMA3D-204ENST00000484038 RNASE8Q8TDE3 154 aaKnown RBP4.1□□□□□ -1.75
SEMA3D-204ENST00000484038 TMEM263Q8WUH6 116 aaKnown RBP4.1□□□□□ -1.75
SEMA3D-204ENST00000484038 TRGV9Q99603 122 aa4.1□□□□□ -1.75
SEMA3D-204ENST00000484038 SEC22CQ9BRL7 303 aa4.1□□□□□ -1.75
SEMA3D-204ENST00000484038 C20orf85Q9H1P6 137 aa4.1□□□□□ -1.75
SEMA3D-204ENST00000484038 CACFD1Q9UGQ2 172 aa4.1□□□□□ -1.75
SEMA3D-204ENST00000484038 IGKV1OR2-108A0A075B7D4 117 aa4.09□□□□□ -1.75
SEMA3D-204ENST00000484038 TRAV8-2A0A0B4J237 113 aa4.09□□□□□ -1.75
SEMA3D-204ENST00000484038 CRYM-AS1A6NIL9 109 aa4.09□□□□□ -1.75
SEMA3D-204ENST00000484038 USP17L23D6RBM5 183 aa4.09□□□□□ -1.75
SEMA3D-204ENST00000484038 SSNA1O43805 119 aa4.09□□□□□ -1.75
SEMA3D-204ENST00000484038 C1QBP02746 253 aa4.09□□□□□ -1.75
SEMA3D-204ENST00000484038 RLN2P04090 185 aa4.09□□□□□ -1.75
SEMA3D-204ENST00000484038 ANXA7P20073 488 aaKnown RBP4.09□□□□□ -1.75
SEMA3D-204ENST00000484038 CDKN1BP46527 198 aa4.09□□□□□ -1.75
SEMA3D-204ENST00000484038 TAS2R19P59542 299 aa4.09□□□□□ -1.75
SEMA3D-204ENST00000484038 SMCO1Q147U7 214 aa4.09□□□□□ -1.75
SEMA3D-204ENST00000484038 STEAP1BQ6NZ63 245 aa4.09□□□□□ -1.75
SEMA3D-204ENST00000484038 ZNF493Q6ZR52 646 aa4.09□□□□□ -1.75
SEMA3D-204ENST00000484038 OR8A1Q8NGG7 326 aa4.09□□□□□ -1.75
SEMA3D-204ENST00000484038 OR4D5Q8NGN0 318 aa4.09□□□□□ -1.75
SEMA3D-204ENST00000484038 GPR82Q96P67 336 aa4.09□□□□□ -1.75
SEMA3D-204ENST00000484038 RTBDNQ9BSG5 229 aaPredicted RBP4.09□□□□□ -1.75
SEMA3D-204ENST00000484038 TMEM147Q9BVK8 224 aa4.09□□□□□ -1.75
SEMA3D-204ENST00000484038 KRTAP2-2Q9BYT5 123 aa4.09□□□□□ -1.75
SEMA3D-204ENST00000484038 MTFP1Q9UDX5 166 aa4.09□□□□□ -1.75
SEMA3D-204ENST00000484038 SNURFLB1AK76 121 aa4.08□□□□□ -1.76
SEMA3D-204ENST00000484038 H7BYZ3 331 aa4.08□□□□□ -1.76
SEMA3D-204ENST00000484038 SIVA1O15304 175 aa4.08□□□□□ -1.76
SEMA3D-204ENST00000484038 TSC22D2O75157 780 aa4.08□□□□□ -1.76
SEMA3D-204ENST00000484038 CFDP00746 253 aaPredicted RBP4.08□□□□□ -1.76
SEMA3D-204ENST00000484038 IAPPP10997 89 aa4.08□□□□□ -1.76
SEMA3D-204ENST00000484038 GATA2P23769 480 aaPredicted RBP4.08□□□□□ -1.76
SEMA3D-204ENST00000484038 S100A7P31151 101 aa4.08□□□□□ -1.76
SEMA3D-204ENST00000484038 AP3S2P59780 193 aa4.08□□□□□ -1.76
SEMA3D-204ENST00000484038 RAB11AP62491 216 aa4.08□□□□□ -1.76
SEMA3D-204ENST00000484038 MRPS10P82664 201 aaKnown RBP4.08□□□□□ -1.76
SEMA3D-204ENST00000484038 GGNBP1Q5YKI7 109 aa4.08□□□□□ -1.76
SEMA3D-204ENST00000484038 TMEM229BQ8NBD8 167 aa4.08□□□□□ -1.76
SEMA3D-204ENST00000484038 BPIFCQ8NFQ6 507 aa4.08□□□□□ -1.76
SEMA3D-204ENST00000484038 OR11H4Q8NGC9 324 aa4.08□□□□□ -1.76
SEMA3D-204ENST00000484038 OR1S1Q8NH92 325 aa4.08□□□□□ -1.76
SEMA3D-204ENST00000484038 LRRC20Q8TCA0 184 aa4.08□□□□□ -1.76
SEMA3D-204ENST00000484038 DEDD2Q8WXF8 326 aa4.08□□□□□ -1.76
SEMA3D-204ENST00000484038 HSPB11Q9Y547 144 aa4.08□□□□□ -1.76
SEMA3D-204ENST00000484038 TMEM56-RWDD3S4R434 201 aa4.08□□□□□ -1.76
SEMA3D-204ENST00000484038 A0A087WTM6 91 aa4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 A0A096LPF7 62 aa4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 NAP1L6A6NFF2 107 aa4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 DISC1C4P0D8 188 aa4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 H3BNG1 76 aa4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 J3KRW8 73 aa4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 NDUFB6O95139 128 aa4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 NXPH4O95158 308 aa4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 ANXA3P12429 323 aa4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 AKR1C4P17516 323 aa4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 ATP5IP56385 69 aaPredicted RBP4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 SEC61BP60468 96 aaKnown RBP4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 UBE2MP61081 183 aaKnown RBP4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 AKR1C1Q04828 323 aa4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 SURF2Q15527 256 aaPredicted RBP4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 LYZL2Q7Z4W2 148 aa4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 C9orf62Q8N4C0 152 aa4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 LINC00612Q8N6U2 182 aa4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 THAP8Q8NA92 274 aa4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 ZNF431Q8TF32 576 aaPredicted RBP4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 IL22RA2Q969J5 263 aa4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 PARD6GQ9BYG4 376 aaPredicted RBP4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 KCNIP3Q9Y2W7 256 aa4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 FLG2Q5D862 2391 aaPredicted RBP4.07□□□□□ -1.76
SEMA3D-204ENST00000484038 TRGV2A0A075B6R0 118 aa4.06□□□□□ -1.76
SEMA3D-204ENST00000484038 A0A0B4J2A0 478 aa4.06□□□□□ -1.76
SEMA3D-204ENST00000484038 G3V3Q6 166 aa4.06□□□□□ -1.76
SEMA3D-204ENST00000484038 H3BRN7 92 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms