RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 C20orf173Q96LM9 149 aa7.59□□□□□ -1.19
USP39-215ENST00000481409 SAV1Q9H4B6 383 aaPredicted RBP7.59□□□□□ -1.19
USP39-215ENST00000481409 SDF2L1Q9HCN8 221 aa7.59□□□□□ -1.19
USP39-215ENST00000481409 RPH3ALQ9UNE2 315 aa7.59□□□□□ -1.19
USP39-215ENST00000481409 PSG8Q9UQ74 426 aa7.59□□□□□ -1.19
USP39-215ENST00000481409 WNK1Q9H4A3 2382 aa7.58□□□□□ -1.2
USP39-215ENST00000481409 A0A0J9YX75 114 aa7.58□□□□□ -1.2
USP39-215ENST00000481409 A8MTW9 85 aa7.58□□□□□ -1.2
USP39-215ENST00000481409 ZNF705FA8MVS1 300 aaPredicted RBP7.58□□□□□ -1.2
USP39-215ENST00000481409 OR11H12B2RN74 326 aa7.58□□□□□ -1.2
USP39-215ENST00000481409 ADCYAP1P18509 176 aa7.58□□□□□ -1.2
USP39-215ENST00000481409 HLA-DMBP28068 263 aa7.58□□□□□ -1.2
USP39-215ENST00000481409 TFPI2P48307 235 aa7.58□□□□□ -1.2
USP39-215ENST00000481409 CENPWQ5EE01 88 aa7.58□□□□□ -1.2
USP39-215ENST00000481409 Q86TA4 180 aa7.58□□□□□ -1.2
USP39-215ENST00000481409 IGF2BP2-AS1Q96M15 143 aa7.58□□□□□ -1.2
USP39-215ENST00000481409 MLST8Q9BVC4 326 aa7.58□□□□□ -1.2
USP39-215ENST00000481409 MAP6D1Q9H9H5 199 aa7.58□□□□□ -1.2
USP39-215ENST00000481409 ZNF492Q9P255 531 aa7.58□□□□□ -1.2
USP39-215ENST00000481409 FBN1P35555 2871 aaKnown RBP7.58□□□□□ -1.2
USP39-215ENST00000481409 IZUMO1RA6ND01 250 aa7.57□□□□□ -1.2
USP39-215ENST00000481409 PPP1R2P9O14990 202 aa7.57□□□□□ -1.2
USP39-215ENST00000481409 AMBPP02760 352 aa7.57□□□□□ -1.2
USP39-215ENST00000481409 CT45A10P0DMU9 189 aa7.57□□□□□ -1.2
USP39-215ENST00000481409 HLA-DRB4P13762 266 aa7.57□□□□□ -1.2
USP39-215ENST00000481409 TSPOP30536 169 aa7.57□□□□□ -1.2
USP39-215ENST00000481409 DEFB131AP59861 70 aa7.57□□□□□ -1.2
USP39-215ENST00000481409 RHEBQ15382 184 aa7.57□□□□□ -1.2
USP39-215ENST00000481409 IGFL4Q6B9Z1 124 aa7.57□□□□□ -1.2
USP39-215ENST00000481409 LINC01551Q86U37 167 aa7.57□□□□□ -1.2
USP39-215ENST00000481409 PRR25Q96S07 402 aa7.57□□□□□ -1.2
USP39-215ENST00000481409 MDFIQ99750 246 aa7.57□□□□□ -1.2
USP39-215ENST00000481409 DERL1Q9BUN8 251 aa7.57□□□□□ -1.2
USP39-215ENST00000481409 AGPAT4-IT1Q9H0P7 198 aa7.57□□□□□ -1.2
USP39-215ENST00000481409 HLA-DRB4X5D2U9 266 aa7.57□□□□□ -1.2
USP39-215ENST00000481409 TRBV20OR9-2A0A075B6H5 130 aa7.56□□□□□ -1.2
USP39-215ENST00000481409 IGKV2-40A0A087WW87 121 aaPredicted RBP7.56□□□□□ -1.2
USP39-215ENST00000481409 PRAC2D3DTV9 90 aa7.56□□□□□ -1.2
USP39-215ENST00000481409 GCGP01275 180 aa7.56□□□□□ -1.2
USP39-215ENST00000481409 IGKV2D-40P01614 121 aaPredicted RBP7.56□□□□□ -1.2
USP39-215ENST00000481409 APOC3P02656 99 aa7.56□□□□□ -1.2
USP39-215ENST00000481409 IGLL1P15814 213 aa7.56□□□□□ -1.2
USP39-215ENST00000481409 CRISP2P16562 243 aa7.56□□□□□ -1.2
USP39-215ENST00000481409 LEPP41159 167 aa7.56□□□□□ -1.2
USP39-215ENST00000481409 NUTF2P61970 127 aaKnown RBP7.56□□□□□ -1.2
USP39-215ENST00000481409 RPL23P62829 140 aaKnown RBP7.56□□□□□ -1.2
USP39-215ENST00000481409 HIST1H1AQ02539 215 aaPredicted RBP7.56□□□□□ -1.2
USP39-215ENST00000481409 EGFEM1PQ0D2K5 195 aa7.56□□□□□ -1.2
USP39-215ENST00000481409 ODF3L2Q3SX64 289 aa7.56□□□□□ -1.2
USP39-215ENST00000481409 SMUG1Q53HV7 270 aa7.56□□□□□ -1.2
USP39-215ENST00000481409 C4orf48Q5BLP8 95 aa7.56□□□□□ -1.2
USP39-215ENST00000481409 FAM231DQ6ZW35 169 aa7.56□□□□□ -1.2
USP39-215ENST00000481409 PRNTQ86SH4 94 aa7.56□□□□□ -1.2
USP39-215ENST00000481409 FAM24BQ8N5W8 94 aa7.56□□□□□ -1.2
USP39-215ENST00000481409 ANAPC16Q96DE5 110 aa7.56□□□□□ -1.2
USP39-215ENST00000481409 FAM19A4Q96LR4 140 aa7.56□□□□□ -1.2
USP39-215ENST00000481409 LINC00479Q96M42 142 aa7.56□□□□□ -1.2
USP39-215ENST00000481409 VGLL1Q99990 258 aa7.56□□□□□ -1.2
USP39-215ENST00000481409 A0A087WWC5 75 aa7.55□□□□□ -1.2
USP39-215ENST00000481409 TRAV8-1A0A0A6YYK1 113 aa7.55□□□□□ -1.2
USP39-215ENST00000481409 TRAV34A0A0B4J273 112 aa7.55□□□□□ -1.2
USP39-215ENST00000481409 H3BMM0 161 aa7.55□□□□□ -1.2
USP39-215ENST00000481409 IGLV2-8P01709 118 aa7.55□□□□□ -1.2
USP39-215ENST00000481409 MT-ND4LP03901 98 aa7.55□□□□□ -1.2
USP39-215ENST00000481409 LINC01559Q495D7 138 aa7.55□□□□□ -1.2
USP39-215ENST00000481409 APRG1Q8IVJ8 170 aa7.55□□□□□ -1.2
USP39-215ENST00000481409 CLRN3Q8NCR9 226 aa7.55□□□□□ -1.2
USP39-215ENST00000481409 OCC1Q8TAD7 63 aa7.55□□□□□ -1.2
USP39-215ENST00000481409 ASCL2Q99929 193 aa7.55□□□□□ -1.2
USP39-215ENST00000481409 CTDSP1Q9GZU7 261 aa7.55□□□□□ -1.2
USP39-215ENST00000481409 TMEM242Q9NWH2 141 aa7.55□□□□□ -1.2
USP39-215ENST00000481409 M0R036 132 aa7.54□□□□□ -1.2
USP39-215ENST00000481409 ERCC8Q13216 396 aa7.54□□□□□ -1.2
USP39-215ENST00000481409 ADIRFQ15847 76 aa7.54□□□□□ -1.2
USP39-215ENST00000481409 MORN3Q6PF18 240 aaPredicted RBP7.54□□□□□ -1.2
USP39-215ENST00000481409 STHQ8IWL8 128 aa7.54□□□□□ -1.2
USP39-215ENST00000481409 C15orf54Q8N8G6 183 aa7.54□□□□□ -1.2
USP39-215ENST00000481409 OR4B1Q8NGF8 309 aa7.54□□□□□ -1.2
USP39-215ENST00000481409 ISOC2Q96AB3 205 aa7.54□□□□□ -1.2
USP39-215ENST00000481409 DAZAP1Q96EP5 407 aaKnown RBP7.54□□□□□ -1.2
USP39-215ENST00000481409 C20orf144Q9BQM9 153 aa7.54□□□□□ -1.2
USP39-215ENST00000481409 OSTCQ9NRP0 149 aa7.54□□□□□ -1.2
USP39-215ENST00000481409 C19orf73Q9NVV2 129 aa7.54□□□□□ -1.2
USP39-215ENST00000481409 FABP5P3A8MUU1 101 aa7.53□□□□□ -1.2
USP39-215ENST00000481409 KLLNB2CW77 178 aa7.53□□□□□ -1.2
USP39-215ENST00000481409 PFN1P07737 140 aaKnown RBP7.53□□□□□ -1.2
USP39-215ENST00000481409 MGST1P10620 155 aaKnown RBP7.53□□□□□ -1.2
USP39-215ENST00000481409 CDKN1BP46527 198 aa7.53□□□□□ -1.2
USP39-215ENST00000481409 CT83Q5H943 113 aa7.53□□□□□ -1.2
USP39-215ENST00000481409 ACTL10Q5JWF8 245 aa7.53□□□□□ -1.2
USP39-215ENST00000481409 FAM162BQ5T6X4 162 aa7.53□□□□□ -1.2
USP39-215ENST00000481409 SFRP2Q96HF1 295 aa7.53□□□□□ -1.2
USP39-215ENST00000481409 SELENOKQ9Y6D0 94 aa7.53□□□□□ -1.2
USP39-215ENST00000481409 TENM1Q9UKZ4 2725 aa7.53□□□□□ -1.2
USP39-215ENST00000481409 TRAV21A0A0B4J279 112 aa7.52□□□□□ -1.21
USP39-215ENST00000481409 XKRY2A2RUG3 117 aa7.52□□□□□ -1.21
USP39-215ENST00000481409 C19orf71A6NCJ1 209 aa7.52□□□□□ -1.21
USP39-215ENST00000481409 CXorf65A6NEN9 183 aa7.52□□□□□ -1.21
USP39-215ENST00000481409 F6UB75 175 aa7.52□□□□□ -1.21
USP39-215ENST00000481409 GPX1P07203 203 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms