RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 TCTAP57738 103 aa4.35□□□□□ -1.71
VPS50-215ENST00000480943 HIST1H1AQ02539 215 aaPredicted RBP4.35□□□□□ -1.71
VPS50-215ENST00000480943 ASAH1Q13510 395 aa4.35□□□□□ -1.71
VPS50-215ENST00000480943 SPINK13Q1W4C9 94 aa4.35□□□□□ -1.71
VPS50-215ENST00000480943 RRN3P1Q2M238 152 aa4.35□□□□□ -1.71
VPS50-215ENST00000480943 FAM222AQ5U5X8 452 aa4.35□□□□□ -1.71
VPS50-215ENST00000480943 MZT2BQ6NZ67 158 aa4.35□□□□□ -1.71
VPS50-215ENST00000480943 AMTNQ6UX39 209 aa4.35□□□□□ -1.71
VPS50-215ENST00000480943 LINC00305Q7Z4B0 112 aa4.35□□□□□ -1.71
VPS50-215ENST00000480943 S100A7AQ86SG5 101 aa4.35□□□□□ -1.71
VPS50-215ENST00000480943 BAP18Q8IXM2 172 aa4.35□□□□□ -1.71
VPS50-215ENST00000480943 ENKURQ8TC29 256 aa4.35□□□□□ -1.71
VPS50-215ENST00000480943 C2orf50Q96LR7 162 aa4.35□□□□□ -1.71
VPS50-215ENST00000480943 TMEM208Q9BTX3 173 aa4.35□□□□□ -1.71
VPS50-215ENST00000480943 TRAV12-2A0A075B6T6 113 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 TEX48A0A1B0GUV7 120 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 IGSF23A1L1A6 192 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 H3BTX0 84 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 BOLA2-SMG1P6H3BVE0 249 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 MRPS12O15235 138 aaKnown RBP4.34□□□□□ -1.71
VPS50-215ENST00000480943 AMBPP02760 352 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 SPART-AS1P0CW21 52 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 CXCL3P19876 107 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 CAMLGP49069 296 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 RHOBP62745 196 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 BAXQ07812 192 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 OPCMLQ14982 345 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 C10orf113Q5VZT2 155 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 MIC13Q5XKP0 118 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 LCN15Q6UWW0 184 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 NRARPQ7Z6K4 114 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 OR8A1Q8NGG7 326 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 TMEM37Q8WXS4 190 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 IGF2BP2-AS1Q96M15 143 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 SLC50A1Q9BRV3 221 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 RNF126Q9BV68 326 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 GGACTQ9BVM4 153 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 C11orf1Q9H5F2 150 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 LYRM2Q9NU23 88 aaPredicted RBP4.34□□□□□ -1.71
VPS50-215ENST00000480943 UQCC1Q9NVA1 299 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 PPP1R14DQ9NXH3 145 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 RNF24Q9Y225 148 aa4.34□□□□□ -1.71
VPS50-215ENST00000480943 YTHDF2Q9Y5A9 579 aaKnown RBP4.34□□□□□ -1.71
VPS50-215ENST00000480943 TRAV5A0A0B4J249 113 aa4.33□□□□□ -1.72
VPS50-215ENST00000480943 ZNF705GA8MUZ8 300 aaPredicted RBP4.33□□□□□ -1.72
VPS50-215ENST00000480943 SLC17A3O00476 420 aa4.33□□□□□ -1.72
VPS50-215ENST00000480943 CRXO43186 299 aaPredicted RBP4.33□□□□□ -1.72
VPS50-215ENST00000480943 UPK1BO75841 260 aa4.33□□□□□ -1.72
VPS50-215ENST00000480943 SIX6O95475 246 aa4.33□□□□□ -1.72
VPS50-215ENST00000480943 IGLV2-11P01706 119 aa4.33□□□□□ -1.72
VPS50-215ENST00000480943 PRM2P04554 102 aa4.33□□□□□ -1.72
VPS50-215ENST00000480943 HTN3P15516 51 aa4.33□□□□□ -1.72
VPS50-215ENST00000480943 CXCL2P19875 107 aa4.33□□□□□ -1.72
VPS50-215ENST00000480943 FGF7P21781 194 aa4.33□□□□□ -1.72
VPS50-215ENST00000480943 SULT1A1P50225 295 aa4.33□□□□□ -1.72
VPS50-215ENST00000480943 PSG3Q16557 428 aa4.33□□□□□ -1.72
VPS50-215ENST00000480943 Q6ZRG5 221 aa4.33□□□□□ -1.72
VPS50-215ENST00000480943 LINC00299Q6ZSB3 139 aa4.33□□□□□ -1.72
VPS50-215ENST00000480943 STX12Q86Y82 276 aa4.33□□□□□ -1.72
VPS50-215ENST00000480943 BPIFA4PQ86YQ2 179 aa4.33□□□□□ -1.72
VPS50-215ENST00000480943 TMEM252Q8N6L7 170 aa4.33□□□□□ -1.72
VPS50-215ENST00000480943 OR1L4Q8NGR5 311 aa4.33□□□□□ -1.72
VPS50-215ENST00000480943 RPUSD4Q96CM3 377 aaKnown RBP4.33□□□□□ -1.72
VPS50-215ENST00000480943 NIPSNAP3BQ9BS92 247 aa4.33□□□□□ -1.72
VPS50-215ENST00000480943 NDUFAF3Q9BU61 184 aa4.33□□□□□ -1.72
VPS50-215ENST00000480943 GPN1Q9HCN4 374 aaPredicted RBP4.33□□□□□ -1.72
VPS50-215ENST00000480943 ZNF331Q9NQX6 463 aaPredicted RBP4.33□□□□□ -1.72
VPS50-215ENST00000480943 WDR83OSQ9Y284 106 aa4.33□□□□□ -1.72
VPS50-215ENST00000480943 hDV102S1A0JD36 115 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 GAGE7O76087 117 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 GAGE12FP0CL80 117 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 GAGE12GP0CL81 117 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 GAGE12IP0CL82 117 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 P0DMU3 169 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 FAM231AP0DMU4 169 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 FAM231CP0DMU5 169 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 IGLC2P0DOY2 106 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 S100A11P31949 105 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 B2MP61769 119 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 DAD1P61803 113 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 HBG1P69891 147 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 HBG2P69892 147 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 IFITM3Q01628 133 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 GAGE1Q13065 139 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 GAGE4Q13068 117 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 IL15RAQ13261 267 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 RAB31Q13636 194 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 VWC2Q2TAL6 325 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 LRRC37A5PQ49AS3 106 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 PFDN5Q99471 154 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 PARD6GQ9BYG4 376 aaPredicted RBP4.32□□□□□ -1.72
VPS50-215ENST00000480943 SLC39A9Q9NUM3 307 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 PTTG2Q9NZH5 202 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 OR5AC2Q9NZP5 309 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 PXMP4Q9Y6I8 212 aa4.32□□□□□ -1.72
VPS50-215ENST00000480943 PRAC2D3DTV9 90 aa4.31□□□□□ -1.72
VPS50-215ENST00000480943 INMT-MINDY4F8WBC2 141 aa4.31□□□□□ -1.72
VPS50-215ENST00000480943 H3BQ15 152 aa4.31□□□□□ -1.72
VPS50-215ENST00000480943 J3KRW8 73 aa4.31□□□□□ -1.72
VPS50-215ENST00000480943 PRAF2O60831 178 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms