RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 FBLL1A6NHQ2 334 aaKnown RBP13.08□□□□□ -0.32
UPF3A-206ENST00000480362 CMC4P56277 68 aaPredicted RBP13.08□□□□□ -0.32
UPF3A-206ENST00000480362 EBLN2Q6P2I7 272 aa13.08□□□□□ -0.32
UPF3A-206ENST00000480362 C9orf47Q6ZRZ4 202 aa13.08□□□□□ -0.32
UPF3A-206ENST00000480362 Q86TA4 180 aa13.08□□□□□ -0.32
UPF3A-206ENST00000480362 OCC1Q8TAD7 63 aa13.08□□□□□ -0.32
UPF3A-206ENST00000480362 TVP23CQ96ET8 276 aa13.08□□□□□ -0.32
UPF3A-206ENST00000480362 ASCL2Q99929 193 aa13.08□□□□□ -0.32
UPF3A-206ENST00000480362 A0A0J9YX75 114 aa13.07□□□□□ -0.32
UPF3A-206ENST00000480362 NPIPB6E9PJ23 425 aa13.07□□□□□ -0.32
UPF3A-206ENST00000480362 LTAP01374 205 aa13.07□□□□□ -0.32
UPF3A-206ENST00000480362 ODF3L2Q3SX64 289 aa13.07□□□□□ -0.32
UPF3A-206ENST00000480362 TMEM78Q5T7P6 136 aa13.07□□□□□ -0.32
UPF3A-206ENST00000480362 GDF5OSQ5U4N7 250 aa13.07□□□□□ -0.32
UPF3A-206ENST00000480362 FOXI2Q6ZQN5 318 aa13.07□□□□□ -0.32
UPF3A-206ENST00000480362 LINC00477Q96M19 166 aa13.07□□□□□ -0.32
UPF3A-206ENST00000480362 SAV1Q9H4B6 383 aaPredicted RBP13.07□□□□□ -0.32
UPF3A-206ENST00000480362 AURKAIP1Q9NWT8 199 aaPredicted RBP13.07□□□□□ -0.32
UPF3A-206ENST00000480362 KNCNA6PVL3 124 aa13.06□□□□□ -0.32
UPF3A-206ENST00000480362 WIPF1O43516 503 aa13.06□□□□□ -0.32
UPF3A-206ENST00000480362 IGLV2-8P01709 118 aa13.06□□□□□ -0.32
UPF3A-206ENST00000480362 CD7P09564 240 aa13.06□□□□□ -0.32
UPF3A-206ENST00000480362 ZNF138P52744 262 aa13.06□□□□□ -0.32
UPF3A-206ENST00000480362 RPL23P62829 140 aaKnown RBP13.06□□□□□ -0.32
UPF3A-206ENST00000480362 ZNF124Q15973 351 aa13.06□□□□□ -0.32
UPF3A-206ENST00000480362 APRG1Q8IVJ8 170 aa13.06□□□□□ -0.32
UPF3A-206ENST00000480362 NHLRC2Q8NBF2 726 aa13.06□□□□□ -0.32
UPF3A-206ENST00000480362 Q8TAT8 98 aa13.06□□□□□ -0.32
UPF3A-206ENST00000480362 GPR61Q9BZJ8 451 aa13.06□□□□□ -0.32
UPF3A-206ENST00000480362 ZFP30Q9Y2G7 519 aa13.06□□□□□ -0.32
UPF3A-206ENST00000480362 LY96Q9Y6Y9 160 aa13.06□□□□□ -0.32
UPF3A-206ENST00000480362 OR11H12B2RN74 326 aa13.05□□□□□ -0.32
UPF3A-206ENST00000480362 CT45A10P0DMU9 189 aa13.05□□□□□ -0.32
UPF3A-206ENST00000480362 LINC01551Q86U37 167 aa13.05□□□□□ -0.32
UPF3A-206ENST00000480362 PRR25Q96S07 402 aa13.05□□□□□ -0.32
UPF3A-206ENST00000480362 ZNF492Q9P255 531 aa13.05□□□□□ -0.32
UPF3A-206ENST00000480362 M0R036 132 aa13.04□□□□□ -0.32
UPF3A-206ENST00000480362 DUSP14O95147 198 aaKnown RBP13.04□□□□□ -0.32
UPF3A-206ENST00000480362 MGST1P10620 155 aaKnown RBP13.04□□□□□ -0.32
UPF3A-206ENST00000480362 ADIRFQ15847 76 aa13.04□□□□□ -0.32
UPF3A-206ENST00000480362 OXLD1Q5BKU9 147 aa13.04□□□□□ -0.32
UPF3A-206ENST00000480362 ACTL10Q5JWF8 245 aa13.04□□□□□ -0.32
UPF3A-206ENST00000480362 SAPCD1Q5SSQ6 148 aa13.04□□□□□ -0.32
UPF3A-206ENST00000480362 TMEM183AQ8IXX5 376 aa13.04□□□□□ -0.32
UPF3A-206ENST00000480362 SVBPQ8N300 66 aa13.04□□□□□ -0.32
UPF3A-206ENST00000480362 FAM110AQ9BQ89 295 aa13.04□□□□□ -0.32
UPF3A-206ENST00000480362 MLST8Q9BVC4 326 aa13.04□□□□□ -0.32
UPF3A-206ENST00000480362 PPP1R14DQ9NXH3 145 aa13.04□□□□□ -0.32
UPF3A-206ENST00000480362 K7EN84 100 aa13.03□□□□□ -0.32
UPF3A-206ENST00000480362 PNRC1Q12796 327 aaPredicted RBP13.03□□□□□ -0.32
UPF3A-206ENST00000480362 OR4B1Q8NGF8 309 aa13.03□□□□□ -0.32
UPF3A-206ENST00000480362 SMIM12Q96EX1 92 aa13.03□□□□□ -0.32
UPF3A-206ENST00000480362 C8orf49Q96NF6 230 aa13.03□□□□□ -0.32
UPF3A-206ENST00000480362 NDFIP1Q9BT67 221 aa13.03□□□□□ -0.32
UPF3A-206ENST00000480362 C19orf73Q9NVV2 129 aa13.03□□□□□ -0.32
UPF3A-206ENST00000480362 COL6A5A8TX70 2615 aa13.02□□□□□ -0.32
UPF3A-206ENST00000480362 H3BMM0 161 aa13.02□□□□□ -0.33
UPF3A-206ENST00000480362 GCGP01275 180 aa13.02□□□□□ -0.33
UPF3A-206ENST00000480362 IGKV3-20P01619 116 aa13.02□□□□□ -0.33
UPF3A-206ENST00000480362 HLA-DRB4P13762 266 aa13.02□□□□□ -0.33
UPF3A-206ENST00000480362 OR5I1Q13606 314 aa13.02□□□□□ -0.33
UPF3A-206ENST00000480362 CLRN3Q8NCR9 226 aa13.02□□□□□ -0.33
UPF3A-206ENST00000480362 HLA-DRB4X5D2U9 266 aa13.02□□□□□ -0.33
UPF3A-206ENST00000480362 STAB1Q9NY15 2570 aa13.01□□□□□ -0.33
UPF3A-206ENST00000480362 SNAPINO95295 136 aa13.01□□□□□ -0.33
UPF3A-206ENST00000480362 GTSCR1Q86UQ5 136 aa13.01□□□□□ -0.33
UPF3A-206ENST00000480362 ZC2HC1AQ96GY0 325 aa13.01□□□□□ -0.33
UPF3A-206ENST00000480362 FAM19A4Q96LR4 140 aa13.01□□□□□ -0.33
UPF3A-206ENST00000480362 LENEPQ9Y5L5 61 aa13.01□□□□□ -0.33
UPF3A-206ENST00000480362 SORL1Q92673 2214 aa13□□□□□ -0.33
UPF3A-206ENST00000480362 ISOC2Q96AB3 205 aa13□□□□□ -0.33
UPF3A-206ENST00000480362 WFDC10AQ9H1F0 79 aa13□□□□□ -0.33
UPF3A-206ENST00000480362 SMUG1Q53HV7 270 aa12.99□□□□□ -0.33
UPF3A-206ENST00000480362 PRR27Q6MZM9 219 aa12.99□□□□□ -0.33
UPF3A-206ENST00000480362 ATRAIDQ6UW56 229 aa12.99□□□□□ -0.33
UPF3A-206ENST00000480362 COX8CQ7Z4L0 72 aa12.99□□□□□ -0.33
UPF3A-206ENST00000480362 TRBV7-9A0A0J9YWB2 115 aa12.98□□□□□ -0.33
UPF3A-206ENST00000480362 C7orf77A4D0Y5 90 aa12.98□□□□□ -0.33
UPF3A-206ENST00000480362 A8MTW9 85 aa12.98□□□□□ -0.33
UPF3A-206ENST00000480362 B4DEV8 164 aa12.98□□□□□ -0.33
UPF3A-206ENST00000480362 J3KRW8 73 aa12.98□□□□□ -0.33
UPF3A-206ENST00000480362 CRISP2P16562 243 aa12.98□□□□□ -0.33
UPF3A-206ENST00000480362 AMTNQ6UX39 209 aa12.98□□□□□ -0.33
UPF3A-206ENST00000480362 LINC00322Q6ZN03 302 aaPredicted RBP12.98□□□□□ -0.33
UPF3A-206ENST00000480362 STHQ8IWL8 128 aa12.98□□□□□ -0.33
UPF3A-206ENST00000480362 ZFAND2AQ8N6M9 145 aa12.98□□□□□ -0.33
UPF3A-206ENST00000480362 ODF3Q96PU9 254 aa12.98□□□□□ -0.33
UPF3A-206ENST00000480362 BIN3Q9NQY0 253 aa12.98□□□□□ -0.33
UPF3A-206ENST00000480362 RBMY1BA6NDE4 496 aaKnown RBP12.97□□□□□ -0.33
UPF3A-206ENST00000480362 RBMY1EA6NEQ0 496 aaKnown RBP12.97□□□□□ -0.33
UPF3A-206ENST00000480362 RBMY1DP0C7P1 496 aaKnown RBP12.97□□□□□ -0.33
UPF3A-206ENST00000480362 LEPP41159 167 aa12.97□□□□□ -0.33
UPF3A-206ENST00000480362 CRIP1P50238 77 aa12.97□□□□□ -0.33
UPF3A-206ENST00000480362 ZNF80P51504 273 aaPredicted RBP12.97□□□□□ -0.33
UPF3A-206ENST00000480362 DEFB125Q8N687 156 aa12.97□□□□□ -0.33
UPF3A-206ENST00000480362 CLUHP3Q96NS8 147 aa12.97□□□□□ -0.33
UPF3A-206ENST00000480362 RNASE7Q9H1E1 156 aaKnown RBP12.97□□□□□ -0.33
UPF3A-206ENST00000480362 RPS10P5Q9NQ39 176 aa12.97□□□□□ -0.33
UPF3A-206ENST00000480362 G3V4G9 280 aa12.96□□□□□ -0.33
UPF3A-206ENST00000480362 GPX1P07203 203 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms