RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 M0R2Z0 102 aa6.6□□□□□ -1.35
VCP-206ENST00000480327 UBE2CO00762 179 aa6.6□□□□□ -1.35
VCP-206ENST00000480327 SLC25A5P05141 298 aaKnown RBP6.6□□□□□ -1.35
VCP-206ENST00000480327 GIG44P09565 113 aaPredicted RBP6.6□□□□□ -1.35
VCP-206ENST00000480327 CSN1S1P47710 185 aa6.6□□□□□ -1.35
VCP-206ENST00000480327 NUTF2P61970 127 aaKnown RBP6.6□□□□□ -1.35
VCP-206ENST00000480327 SUMO1P63165 101 aaKnown RBP6.6□□□□□ -1.35
VCP-206ENST00000480327 SPINK13Q1W4C9 94 aa6.6□□□□□ -1.35
VCP-206ENST00000480327 MORN3Q6PF18 240 aaPredicted RBP6.6□□□□□ -1.35
VCP-206ENST00000480327 LYPD1Q8N2G4 141 aa6.6□□□□□ -1.35
VCP-206ENST00000480327 SUN5Q8TC36 379 aa6.6□□□□□ -1.35
VCP-206ENST00000480327 MBD3L1Q8WWY6 194 aa6.6□□□□□ -1.35
VCP-206ENST00000480327 MRPL53Q96EL3 112 aaKnown RBP6.6□□□□□ -1.35
VCP-206ENST00000480327 VGLL1Q99990 258 aa6.6□□□□□ -1.35
VCP-206ENST00000480327 OTORQ9NRC9 128 aa6.6□□□□□ -1.35
VCP-206ENST00000480327 YTHDF2Q9Y5A9 579 aaKnown RBP6.6□□□□□ -1.35
VCP-206ENST00000480327 TRAV12-2A0A075B6T6 113 aa6.59□□□□□ -1.35
VCP-206ENST00000480327 GGTLC3B5MD39 225 aa6.59□□□□□ -1.35
VCP-206ENST00000480327 J3KRW8 73 aa6.59□□□□□ -1.35
VCP-206ENST00000480327 SPRY2O43597 315 aa6.59□□□□□ -1.35
VCP-206ENST00000480327 RAB5CP51148 216 aa6.59□□□□□ -1.35
VCP-206ENST00000480327 CCL20P78556 96 aa6.59□□□□□ -1.35
VCP-206ENST00000480327 SMUG1Q53HV7 270 aa6.59□□□□□ -1.35
VCP-206ENST00000480327 CST9LP1Q5W188 147 aa6.59□□□□□ -1.35
VCP-206ENST00000480327 AMTNQ6UX39 209 aa6.59□□□□□ -1.35
VCP-206ENST00000480327 GOLT1AQ6ZVE7 132 aa6.59□□□□□ -1.35
VCP-206ENST00000480327 OVOL2Q9BRP0 275 aa6.59□□□□□ -1.35
VCP-206ENST00000480327 AGPAT4-IT1Q9H0P7 198 aa6.59□□□□□ -1.35
VCP-206ENST00000480327 DNAH17Q9UFH2 4485 aa6.58□□□□□ -1.36
VCP-206ENST00000480327 DNAH2Q9P225 4427 aa6.58□□□□□ -1.36
VCP-206ENST00000480327 FAT2Q9NYQ8 4349 aa6.58□□□□□ -1.36
VCP-206ENST00000480327 IGHV3OR16-12A0A075B7B8 117 aa6.58□□□□□ -1.36
VCP-206ENST00000480327 FAM74A7A6NL05 159 aa6.58□□□□□ -1.36
VCP-206ENST00000480327 A8MTW9 85 aa6.58□□□□□ -1.36
VCP-206ENST00000480327 DIRC3C9JPN6 131 aa6.58□□□□□ -1.36
VCP-206ENST00000480327 NPIPB6E9PJ23 425 aa6.58□□□□□ -1.36
VCP-206ENST00000480327 PAGE4O60829 102 aa6.58□□□□□ -1.36
VCP-206ENST00000480327 IFNA7P01567 189 aa6.58□□□□□ -1.36
VCP-206ENST00000480327 CT45A10P0DMU9 189 aa6.58□□□□□ -1.36
VCP-206ENST00000480327 Q6ZWC4 215 aa6.58□□□□□ -1.36
VCP-206ENST00000480327 IL17DQ8TAD2 202 aa6.58□□□□□ -1.36
VCP-206ENST00000480327 Q8TAT8 98 aa6.58□□□□□ -1.36
VCP-206ENST00000480327 RXFP4Q8TDU9 374 aa6.58□□□□□ -1.36
VCP-206ENST00000480327 RNF183Q96D59 192 aa6.58□□□□□ -1.36
VCP-206ENST00000480327 SGK494Q96LW2 274 aa6.58□□□□□ -1.36
VCP-206ENST00000480327 TRAV8-1A0A0A6YYK1 113 aa6.57□□□□□ -1.36
VCP-206ENST00000480327 A0A1W2PRE2 83 aa6.57□□□□□ -1.36
VCP-206ENST00000480327 ATP5G3P48201 142 aa6.57□□□□□ -1.36
VCP-206ENST00000480327 KIR3DS1Q14943 382 aa6.57□□□□□ -1.36
VCP-206ENST00000480327 TMEM78Q5T7P6 136 aa6.57□□□□□ -1.36
VCP-206ENST00000480327 C5orf17Q8NAS9 161 aa6.57□□□□□ -1.36
VCP-206ENST00000480327 CSNK1G2-AS1Q8NCQ2 148 aa6.57□□□□□ -1.36
VCP-206ENST00000480327 PCNPQ8WW12 178 aaKnown RBP6.57□□□□□ -1.36
VCP-206ENST00000480327 LINC00477Q96M19 166 aa6.57□□□□□ -1.36
VCP-206ENST00000480327 CLUHP3Q96NS8 147 aa6.57□□□□□ -1.36
VCP-206ENST00000480327 C1QTNF4Q9BXJ3 329 aa6.57□□□□□ -1.36
VCP-206ENST00000480327 GNG13Q9P2W3 67 aa6.57□□□□□ -1.36
VCP-206ENST00000480327 EPDR1Q9UM22 224 aa6.57□□□□□ -1.36
VCP-206ENST00000480327 DYNC1H1Q14204 4646 aaKnown RBP6.56□□□□□ -1.36
VCP-206ENST00000480327 TRAV1-1A0A0B4J248 108 aa6.56□□□□□ -1.36
VCP-206ENST00000480327 TEX46H3BTG2 121 aa6.56□□□□□ -1.36
VCP-206ENST00000480327 RGS13O14921 159 aa6.56□□□□□ -1.36
VCP-206ENST00000480327 DEFB4AO15263 64 aa6.56□□□□□ -1.36
VCP-206ENST00000480327 CRXO43186 299 aaPredicted RBP6.56□□□□□ -1.36
VCP-206ENST00000480327 HBE1P02100 147 aa6.56□□□□□ -1.36
VCP-206ENST00000480327 TCRAP04437 139 aa6.56□□□□□ -1.36
VCP-206ENST00000480327 LEPP41159 167 aa6.56□□□□□ -1.36
VCP-206ENST00000480327 CDKN1BP46527 198 aa6.56□□□□□ -1.36
VCP-206ENST00000480327 ZNF138P52744 262 aa6.56□□□□□ -1.36
VCP-206ENST00000480327 C9orf47Q6ZRZ4 202 aa6.56□□□□□ -1.36
VCP-206ENST00000480327 OR11H2Q8NH07 326 aa6.56□□□□□ -1.36
VCP-206ENST00000480327 RARRES2Q99969 163 aa6.56□□□□□ -1.36
VCP-206ENST00000480327 TRAV34A0A0B4J273 112 aa6.55□□□□□ -1.36
VCP-206ENST00000480327 RBAKDNA6NC62 111 aa6.55□□□□□ -1.36
VCP-206ENST00000480327 LY6G6CO95867 125 aa6.55□□□□□ -1.36
VCP-206ENST00000480327 INSP01308 110 aa6.55□□□□□ -1.36
VCP-206ENST00000480327 RBMY1A1P0DJD3 496 aaKnown RBP6.55□□□□□ -1.36
VCP-206ENST00000480327 RBMY1CP0DJD4 496 aa6.55□□□□□ -1.36
VCP-206ENST00000480327 TSPOP30536 169 aa6.55□□□□□ -1.36
VCP-206ENST00000480327 RNASE4P34096 147 aaKnown RBP6.55□□□□□ -1.36
VCP-206ENST00000480327 BLOC1S1P78537 153 aa6.55□□□□□ -1.36
VCP-206ENST00000480327 RBMY1FQ15415 496 aaKnown RBP6.55□□□□□ -1.36
VCP-206ENST00000480327 TEX261Q6UWH6 196 aa6.55□□□□□ -1.36
VCP-206ENST00000480327 C1orf158Q8N1D5 194 aa6.55□□□□□ -1.36
VCP-206ENST00000480327 IGF2BP2-AS1Q96M15 143 aa6.55□□□□□ -1.36
VCP-206ENST00000480327 LINC00479Q96M42 142 aa6.55□□□□□ -1.36
VCP-206ENST00000480327 TMEM208Q9BTX3 173 aa6.55□□□□□ -1.36
VCP-206ENST00000480327 ZNF492Q9P255 531 aa6.55□□□□□ -1.36
VCP-206ENST00000480327 TP53TG1Q9Y2A0 90 aa6.55□□□□□ -1.36
VCP-206ENST00000480327 GOLT1BQ9Y3E0 138 aa6.55□□□□□ -1.36
VCP-206ENST00000480327 PKHD1P08F94 4074 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 ABCA13Q86UQ4 5058 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 TRAV12-3A0A0B4J271 114 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 A0A0J9YWU9 116 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 C11orf94C9JXX5 98 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 K7EQM0 130 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 PEX7O00628 323 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 AMBPP02760 352 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 PRM2P04554 102 aa6.54□□□□□ -1.36
VCP-206ENST00000480327 GPX1P07203 203 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms