RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 LY96Q9Y6Y9 160 aa7.69□□□□□ -1.18
CMC1-209ENST00000477739 FASNP49327 2511 aaKnown RBP7.69□□□□□ -1.18
CMC1-209ENST00000477739 PRAC2D3DTV9 90 aa7.69□□□□□ -1.18
CMC1-209ENST00000477739 CST9LQ9H4G1 147 aa7.69□□□□□ -1.18
CMC1-209ENST00000477739 OTORQ9NRC9 128 aa7.69□□□□□ -1.18
CMC1-209ENST00000477739 ITPR1Q14643 2758 aa7.69□□□□□ -1.18
CMC1-209ENST00000477739 NBR2O15453 112 aa7.68□□□□□ -1.18
CMC1-209ENST00000477739 EFNA4P52798 201 aa7.68□□□□□ -1.18
CMC1-209ENST00000477739 TMEM97Q5BJF2 176 aa7.68□□□□□ -1.18
CMC1-209ENST00000477739 FAM74A4Q5TZK3 123 aa7.68□□□□□ -1.18
CMC1-209ENST00000477739 ORMDL3Q8N138 153 aa7.68□□□□□ -1.18
CMC1-209ENST00000477739 MRPL27Q9P0M9 148 aaKnown RBP7.68□□□□□ -1.18
CMC1-209ENST00000477739 DPM3Q9P2X0 92 aa7.68□□□□□ -1.18
CMC1-209ENST00000477739 LOC105371242A0A075B767 164 aa7.68□□□□□ -1.18
CMC1-209ENST00000477739 A1L4Q6 167 aa7.68□□□□□ -1.18
CMC1-209ENST00000477739 MFAP4P55083 255 aa7.68□□□□□ -1.18
CMC1-209ENST00000477739 C15orf32Q32M92 178 aa7.68□□□□□ -1.18
CMC1-209ENST00000477739 H3BVH4 76 aa7.68□□□□□ -1.18
CMC1-209ENST00000477739 EGR2P11161 476 aaPredicted RBP7.68□□□□□ -1.18
CMC1-209ENST00000477739 Q5PR19 223 aa7.68□□□□□ -1.18
CMC1-209ENST00000477739 IL17RELQ6ZVW7 336 aa7.68□□□□□ -1.18
CMC1-209ENST00000477739 LINC00311Q8N616 119 aa7.68□□□□□ -1.18
CMC1-209ENST00000477739 WIPF2Q8TF74 440 aaPredicted RBP7.68□□□□□ -1.18
CMC1-209ENST00000477739 ARPC1AQ92747 370 aa7.68□□□□□ -1.18
CMC1-209ENST00000477739 IFI27L1Q96BM0 104 aa7.68□□□□□ -1.18
CMC1-209ENST00000477739 ZNF462Q96JM2 2506 aa7.68□□□□□ -1.18
CMC1-209ENST00000477739 FLNCQ14315 2725 aa7.67□□□□□ -1.18
CMC1-209ENST00000477739 TRBV19A0A075B6N1 114 aa7.67□□□□□ -1.18
CMC1-209ENST00000477739 IGHV3-64A0A075B6Q5 118 aa7.67□□□□□ -1.18
CMC1-209ENST00000477739 KIR3DS1Q14943 382 aa7.67□□□□□ -1.18
CMC1-209ENST00000477739 HIST2H2BDQ6DRA6 164 aa7.67□□□□□ -1.18
CMC1-209ENST00000477739 LINC00477Q96M19 166 aa7.67□□□□□ -1.18
CMC1-209ENST00000477739 JMJD8Q96S16 334 aa7.67□□□□□ -1.18
CMC1-209ENST00000477739 SPCS1Q9Y6A9 102 aa7.67□□□□□ -1.18
CMC1-209ENST00000477739 TAX1BP3O14907 124 aa7.67□□□□□ -1.18
CMC1-209ENST00000477739 CDSNQ15517 529 aa7.67□□□□□ -1.18
CMC1-209ENST00000477739 MRPL51Q4U2R6 128 aaKnown RBP7.67□□□□□ -1.18
CMC1-209ENST00000477739 TRGV9Q99603 122 aa7.67□□□□□ -1.18
CMC1-209ENST00000477739 KAAG1Q9UBP8 84 aa7.67□□□□□ -1.18
CMC1-209ENST00000477739 ZANQ9Y493 2812 aa7.67□□□□□ -1.18
CMC1-209ENST00000477739 PSMB11A5LHX3 300 aa7.67□□□□□ -1.18
CMC1-209ENST00000477739 CRIP1P50238 77 aa7.67□□□□□ -1.18
CMC1-209ENST00000477739 ZNF80P51504 273 aaPredicted RBP7.67□□□□□ -1.18
CMC1-209ENST00000477739 PLP1P60201 277 aa7.67□□□□□ -1.18
CMC1-209ENST00000477739 SMIM15Q7Z3B0 74 aa7.67□□□□□ -1.18
CMC1-209ENST00000477739 PRRC2AP48634 2157 aaKnown RBP7.66□□□□□ -1.18
CMC1-209ENST00000477739 LINC01548A6NM66 108 aa7.66□□□□□ -1.18
CMC1-209ENST00000477739 F6UB75 175 aa7.66□□□□□ -1.18
CMC1-209ENST00000477739 LTAP01374 205 aa7.66□□□□□ -1.18
CMC1-209ENST00000477739 PSG3Q16557 428 aa7.66□□□□□ -1.18
CMC1-209ENST00000477739 ZNF491Q8N8L2 437 aa7.66□□□□□ -1.18
CMC1-209ENST00000477739 ORAOV1Q8WV07 137 aa7.66□□□□□ -1.18
CMC1-209ENST00000477739 NEU4Q8WWR8 484 aaPredicted RBP7.66□□□□□ -1.18
CMC1-209ENST00000477739 UTP20O75691 2785 aaKnown RBP7.66□□□□□ -1.18
CMC1-209ENST00000477739 LOC107984156A0A0G2JMH3 177 aa7.66□□□□□ -1.18
CMC1-209ENST00000477739 SCGB1D4Q6XE38 83 aa7.66□□□□□ -1.18
CMC1-209ENST00000477739 ARL17AQ8IVW1 177 aa7.66□□□□□ -1.18
CMC1-209ENST00000477739 C16orf92Q96LL3 132 aa7.66□□□□□ -1.18
CMC1-209ENST00000477739 CHODLQ9H9P2 273 aa7.66□□□□□ -1.18
CMC1-209ENST00000477739 CSMD2Q7Z408 3487 aa7.66□□□□□ -1.18
CMC1-209ENST00000477739 K7EIM0 57 aa7.66□□□□□ -1.18
CMC1-209ENST00000477739 CEACAM3P40198 252 aa7.66□□□□□ -1.18
CMC1-209ENST00000477739 OCIAD2Q56VL3 154 aa7.66□□□□□ -1.18
CMC1-209ENST00000477739 FAM162BQ5T6X4 162 aa7.66□□□□□ -1.18
CMC1-209ENST00000477739 ZC2HC1BQ5TFG8 222 aa7.66□□□□□ -1.18
CMC1-209ENST00000477739 TRAV40A0A0B4J280 105 aa7.65□□□□□ -1.18
CMC1-209ENST00000477739 TMEM158Q8WZ71 300 aa7.65□□□□□ -1.18
CMC1-209ENST00000477739 ZNF747Q9BV97 191 aa7.65□□□□□ -1.18
CMC1-209ENST00000477739 GTSF1LQ9H1H1 148 aa7.65□□□□□ -1.18
CMC1-209ENST00000477739 ST20Q9HBF5 79 aa7.65□□□□□ -1.18
CMC1-209ENST00000477739 MRPS16Q9Y3D3 137 aaKnown RBP7.65□□□□□ -1.18
CMC1-209ENST00000477739 TEX22C9J3V5 150 aa7.65□□□□□ -1.18
CMC1-209ENST00000477739 SMAGPQ0VAQ4 97 aa7.65□□□□□ -1.18
CMC1-209ENST00000477739 DYNAPQ8N1N2 210 aa7.65□□□□□ -1.18
CMC1-209ENST00000477739 OR2K2Q8NGT1 345 aa7.65□□□□□ -1.18
CMC1-209ENST00000477739 TNFRSF14Q92956 283 aa7.65□□□□□ -1.18
CMC1-209ENST00000477739 HIST1H4GQ99525 98 aa7.65□□□□□ -1.18
CMC1-209ENST00000477739 PEF1Q9UBV8 284 aaKnown RBP7.65□□□□□ -1.18
CMC1-209ENST00000477739 A0A0G2JLM5 398 aa7.65□□□□□ -1.19
CMC1-209ENST00000477739 TRGV3P03979 118 aa7.65□□□□□ -1.19
CMC1-209ENST00000477739 ESDP10768 282 aa7.65□□□□□ -1.19
CMC1-209ENST00000477739 MAPK1IP1LQ8NDC0 245 aa7.65□□□□□ -1.19
CMC1-209ENST00000477739 MAP1LC3AQ9H492 121 aa7.65□□□□□ -1.19
CMC1-209ENST00000477739 K7ERU9 68 aa7.64□□□□□ -1.19
CMC1-209ENST00000477739 APOMO95445 188 aa7.64□□□□□ -1.19
CMC1-209ENST00000477739 RPL7P18124 248 aaKnown RBP7.64□□□□□ -1.19
CMC1-209ENST00000477739 DLX6P56179 175 aa7.64□□□□□ -1.19
CMC1-209ENST00000477739 HIST1H1AQ02539 215 aaPredicted RBP7.64□□□□□ -1.19
CMC1-209ENST00000477739 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.64□□□□□ -1.19
CMC1-209ENST00000477739 SIGLEC15Q6ZMC9 328 aa7.64□□□□□ -1.19
CMC1-209ENST00000477739 SHANK2-AS3Q9BTD1 123 aa7.64□□□□□ -1.19
CMC1-209ENST00000477739 SOX21Q9Y651 276 aaPredicted RBP7.64□□□□□ -1.19
CMC1-209ENST00000477739 HBDP02042 147 aa7.64□□□□□ -1.19
CMC1-209ENST00000477739 IGF1P05019 195 aa7.64□□□□□ -1.19
CMC1-209ENST00000477739 KLRB1Q12918 225 aa7.64□□□□□ -1.19
CMC1-209ENST00000477739 KHDC1LQ5JSQ8 128 aa7.64□□□□□ -1.19
CMC1-209ENST00000477739 FAM231DQ6ZW35 169 aa7.64□□□□□ -1.19
CMC1-209ENST00000477739 VMO1Q7Z5L0 202 aa7.64□□□□□ -1.19
CMC1-209ENST00000477739 ZNF418Q8TF45 676 aaPredicted RBP7.64□□□□□ -1.19
CMC1-209ENST00000477739 COL25A1Q9BXS0 654 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms