RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 AP3S1Q92572 193 aa6.48□□□□□ -1.37
COL4A5-204ENST00000477429 ZNF479Q96JC4 524 aa6.48□□□□□ -1.37
COL4A5-204ENST00000477429 SLC50A1Q9BRV3 221 aa6.48□□□□□ -1.37
COL4A5-204ENST00000477429 AGPAT4-IT1Q9H0P7 198 aa6.48□□□□□ -1.37
COL4A5-204ENST00000477429 PRO0255Q9UI72 69 aa6.48□□□□□ -1.37
COL4A5-204ENST00000477429 STRAPQ9Y3F4 350 aaKnown RBP6.48□□□□□ -1.37
COL4A5-204ENST00000477429 DUXBA0A1W2PPF3 345 aa6.47□□□□□ -1.37
COL4A5-204ENST00000477429 RGS5O15539 181 aa6.47□□□□□ -1.37
COL4A5-204ENST00000477429 CRYGDP07320 174 aa6.47□□□□□ -1.37
COL4A5-204ENST00000477429 METTL15P1P0C7V9 234 aa6.47□□□□□ -1.37
COL4A5-204ENST00000477429 SMIM18P0DKX4 95 aa6.47□□□□□ -1.37
COL4A5-204ENST00000477429 CXCL2P19875 107 aa6.47□□□□□ -1.37
COL4A5-204ENST00000477429 MALP21145 153 aa6.47□□□□□ -1.37
COL4A5-204ENST00000477429 SRPXP78539 464 aa6.47□□□□□ -1.37
COL4A5-204ENST00000477429 MRPS10P82664 201 aaKnown RBP6.47□□□□□ -1.37
COL4A5-204ENST00000477429 IL18Q14116 193 aa6.47□□□□□ -1.37
COL4A5-204ENST00000477429 MRPL23Q16540 153 aaKnown RBP6.47□□□□□ -1.37
COL4A5-204ENST00000477429 TMEM14EPQ6UXP3 125 aa6.47□□□□□ -1.37
COL4A5-204ENST00000477429 Q8N3U1 123 aa6.47□□□□□ -1.37
COL4A5-204ENST00000477429 EIF4E3Q8N5X7 224 aaKnown RBP6.47□□□□□ -1.37
COL4A5-204ENST00000477429 ZFAND2AQ8N6M9 145 aa6.47□□□□□ -1.37
COL4A5-204ENST00000477429 DEFB104AQ8WTQ1 72 aa6.47□□□□□ -1.37
COL4A5-204ENST00000477429 C15orf40Q8WUR7 153 aa6.47□□□□□ -1.37
COL4A5-204ENST00000477429 ODF3Q96PU9 254 aa6.47□□□□□ -1.37
COL4A5-204ENST00000477429 CIB3Q96Q77 187 aaPredicted RBP6.47□□□□□ -1.37
COL4A5-204ENST00000477429 MGST2Q99735 147 aa6.47□□□□□ -1.37
COL4A5-204ENST00000477429 VGLL1Q99990 258 aa6.47□□□□□ -1.37
COL4A5-204ENST00000477429 SOSTQ9BQB4 213 aa6.47□□□□□ -1.37
COL4A5-204ENST00000477429 MRPL32Q9BYC8 188 aaKnown RBP6.47□□□□□ -1.37
COL4A5-204ENST00000477429 PSENENQ9NZ42 101 aa6.47□□□□□ -1.37
COL4A5-204ENST00000477429 SCP2D1Q9UJQ7 156 aa6.47□□□□□ -1.37
COL4A5-204ENST00000477429 AGPAT2O15120 278 aa6.46□□□□□ -1.38
COL4A5-204ENST00000477429 SSSCA1O60232 199 aa6.46□□□□□ -1.38
COL4A5-204ENST00000477429 MED6O75586 246 aa6.46□□□□□ -1.38
COL4A5-204ENST00000477429 NDUFB4O95168 129 aa6.46□□□□□ -1.38
COL4A5-204ENST00000477429 SFT2D2O95562 160 aa6.46□□□□□ -1.38
COL4A5-204ENST00000477429 PLA2G1BP04054 148 aaKnown RBP6.46□□□□□ -1.38
COL4A5-204ENST00000477429 GYPEP15421 78 aa6.46□□□□□ -1.38
COL4A5-204ENST00000477429 HNRNPA3P51991 378 aaKnown RBP6.46□□□□□ -1.38
COL4A5-204ENST00000477429 ZNF680Q8NEM1 530 aa6.46□□□□□ -1.38
COL4A5-204ENST00000477429 NTN5Q8WTR8 489 aaPredicted RBP6.46□□□□□ -1.38
COL4A5-204ENST00000477429 TRAV9-2A0A087WT02 112 aa6.45□□□□□ -1.38
COL4A5-204ENST00000477429 LECT2O14960 151 aa6.45□□□□□ -1.38
COL4A5-204ENST00000477429 SLC25A5P05141 298 aaKnown RBP6.45□□□□□ -1.38
COL4A5-204ENST00000477429 OR4E1P0C645 316 aa6.45□□□□□ -1.38
COL4A5-204ENST00000477429 ANXA3P12429 323 aa6.45□□□□□ -1.38
COL4A5-204ENST00000477429 EVI2AP22794 236 aa6.45□□□□□ -1.38
COL4A5-204ENST00000477429 SELENOTP62341 195 aa6.45□□□□□ -1.38
COL4A5-204ENST00000477429 RPP30P78346 268 aaKnown RBP6.45□□□□□ -1.38
COL4A5-204ENST00000477429 ZNF415Q09FC8 603 aa6.45□□□□□ -1.38
COL4A5-204ENST00000477429 TMEM128Q5BJH2 165 aa6.45□□□□□ -1.38
COL4A5-204ENST00000477429 SCXQ7RTU7 201 aa6.45□□□□□ -1.38
COL4A5-204ENST00000477429 BPIFA4PQ86YQ2 179 aa6.45□□□□□ -1.38
COL4A5-204ENST00000477429 RAB2BQ8WUD1 216 aa6.45□□□□□ -1.38
COL4A5-204ENST00000477429 TRIM63Q969Q1 353 aa6.45□□□□□ -1.38
COL4A5-204ENST00000477429 DIRAS2Q96HU8 199 aa6.45□□□□□ -1.38
COL4A5-204ENST00000477429 Q9HAA7 133 aa6.45□□□□□ -1.38
COL4A5-204ENST00000477429 CCDC59Q9P031 241 aaKnown RBP6.45□□□□□ -1.38
COL4A5-204ENST00000477429 RCL1Q9Y2P8 373 aaKnown RBP6.45□□□□□ -1.38
COL4A5-204ENST00000477429 IGKV2-40A0A087WW87 121 aaPredicted RBP6.44□□□□□ -1.38
COL4A5-204ENST00000477429 IGKV2D-40P01614 121 aaPredicted RBP6.44□□□□□ -1.38
COL4A5-204ENST00000477429 SRIP30626 198 aa6.44□□□□□ -1.38
COL4A5-204ENST00000477429 IBA57Q5T440 356 aaKnown RBP6.44□□□□□ -1.38
COL4A5-204ENST00000477429 LELP1Q5T871 98 aa6.44□□□□□ -1.38
COL4A5-204ENST00000477429 EXOC3-AS1Q8N2X6 119 aa6.44□□□□□ -1.38
COL4A5-204ENST00000477429 OR10P1Q8NGE3 313 aa6.44□□□□□ -1.38
COL4A5-204ENST00000477429 SCGB3A2Q96PL1 93 aa6.44□□□□□ -1.38
COL4A5-204ENST00000477429 NPVFQ9HCQ7 196 aa6.44□□□□□ -1.38
COL4A5-204ENST00000477429 VCX3AQ9NNX9 186 aa6.44□□□□□ -1.38
COL4A5-204ENST00000477429 PXMP4Q9Y6I8 212 aa6.44□□□□□ -1.38
COL4A5-204ENST00000477429 TRGV4A0A0C4DH28 118 aa6.43□□□□□ -1.38
COL4A5-204ENST00000477429 IBA57-AS1B1ANH7 110 aa6.43□□□□□ -1.38
COL4A5-204ENST00000477429 PSCAO43653 123 aa6.43□□□□□ -1.38
COL4A5-204ENST00000477429 COX7A2P2O60397 106 aa6.43□□□□□ -1.38
COL4A5-204ENST00000477429 MPDU1O75352 247 aa6.43□□□□□ -1.38
COL4A5-204ENST00000477429 C1QBP02746 253 aa6.43□□□□□ -1.38
COL4A5-204ENST00000477429 PYYP10082 97 aa6.43□□□□□ -1.38
COL4A5-204ENST00000477429 CRISP2P16562 243 aa6.43□□□□□ -1.38
COL4A5-204ENST00000477429 S100A7P31151 101 aa6.43□□□□□ -1.38
COL4A5-204ENST00000477429 MUC21Q5SSG8 566 aa6.43□□□□□ -1.38
COL4A5-204ENST00000477429 C10orf113Q5VZT2 155 aa6.43□□□□□ -1.38
COL4A5-204ENST00000477429 MIC13Q5XKP0 118 aa6.43□□□□□ -1.38
COL4A5-204ENST00000477429 IQCF2Q8IXL9 164 aa6.43□□□□□ -1.38
COL4A5-204ENST00000477429 SMIM8Q96KF7 97 aa6.43□□□□□ -1.38
COL4A5-204ENST00000477429 TNXBP22105 4242 aa6.42□□□□□ -1.38
COL4A5-204ENST00000477429 TRBV19A0A075B6N1 114 aa6.42□□□□□ -1.38
COL4A5-204ENST00000477429 IGHV1OR15-1A0A075B7D0 117 aa6.42□□□□□ -1.38
COL4A5-204ENST00000477429 GOSR2O14653 212 aa6.42□□□□□ -1.38
COL4A5-204ENST00000477429 IGHV3-30P01768 117 aa6.42□□□□□ -1.38
COL4A5-204ENST00000477429 IGHV3-33P01772 117 aa6.42□□□□□ -1.38
COL4A5-204ENST00000477429 MT1HL1P0DM35 61 aa6.42□□□□□ -1.38
COL4A5-204ENST00000477429 IGHV3-30-3P0DP02 117 aa6.42□□□□□ -1.38
COL4A5-204ENST00000477429 IGHV3-30-5P0DP03 117 aa6.42□□□□□ -1.38
COL4A5-204ENST00000477429 TNFSF8P32971 234 aa6.42□□□□□ -1.38
COL4A5-204ENST00000477429 Q8TAT8 98 aa6.42□□□□□ -1.38
COL4A5-204ENST00000477429 DYNC2LI1Q8TCX1 351 aa6.42□□□□□ -1.38
COL4A5-204ENST00000477429 BLNKQ8WV28 456 aa6.42□□□□□ -1.38
COL4A5-204ENST00000477429 DNAJC30Q96LL9 226 aa6.42□□□□□ -1.38
COL4A5-204ENST00000477429 LINC00477Q96M19 166 aa6.42□□□□□ -1.38
COL4A5-204ENST00000477429 FLVCR2Q9UPI3 526 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms