RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 LINC00312Q9Y6C7 94 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 MINOS1-NBL1R4GNA1 71 aa1.91□□□□□ -2.1
PTCD3-211ENST00000476215 CSMD3Q7Z407 3707 aa1.9□□□□□ -2.1
PTCD3-211ENST00000476215 HUWE1Q7Z6Z7 4374 aaKnown RBP1.9□□□□□ -2.1
PTCD3-211ENST00000476215 TRGV10A0A0A0MS01 117 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 IGKV1-12A0A0C4DH73 117 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 LOC107986453A0A1B0GWG9 222 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 TCRBV4S1A1TA0A5B7 111 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 ODAMA1E959 279 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 IGSF23A1L1A6 192 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 FUOMA2VDF0 154 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 OOSP1A8MZH6 123 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 BUB1B-PAK6H3BSN5 160 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 OR2H2O95918 312 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 CYB5AP00167 134 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 IGKV1D-12P01611 117 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 IGKV1-16P04430 117 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 RPSAP08865 295 aaKnown RBP1.9□□□□□ -2.11
PTCD3-211ENST00000476215 HTR1AP08908 422 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 P0DMU3 169 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 FAM231AP0DMU4 169 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 FAM231CP0DMU5 169 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 CDK2P24941 298 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 NFYBP25208 207 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 BRS3P32247 399 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 EDDM3AQ14507 147 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 CDK5R1Q15078 307 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 KISS1Q15726 138 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 C10orf67Q8IYJ2 551 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 ZNF676Q8N7Q3 588 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 ZNF565Q8N9K5 539 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 OR51T1Q8NGJ9 327 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 OR4P4Q8NGL7 312 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 OR10AC1Q8NH08 325 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 PYDC1Q8WXC3 89 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 CHST5Q9GZS9 411 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 OR51E2Q9H255 320 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 WASHC3Q9Y3C0 194 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 DYNC2H1Q8NCM8 4307 aaKnown RBP1.9□□□□□ -2.11
PTCD3-211ENST00000476215 SACSQ9NZJ4 4579 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 LYSTQ99698 3801 aa1.9□□□□□ -2.11
PTCD3-211ENST00000476215 PLECQ15149 4684 aaKnown RBP1.9□□□□□ -2.11
PTCD3-211ENST00000476215 DNAH1Q9P2D7 4330 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 MEIKINA0A087WXM9 373 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 LOC100130705A0A1B0GUX0 176 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 TMEM212A6NML5 194 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 A8MWP6 167 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 M0QZK8 103 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 CCRL2O00421 344 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 SULT1B1O43704 296 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 MPZL2O60487 215 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 FADS2O95864 444 aaKnown RBP1.89□□□□□ -2.11
PTCD3-211ENST00000476215 CSN2P05814 226 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 OCM2P0CE71 109 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 OCMP0CE72 109 aaPredicted RBP1.89□□□□□ -2.11
PTCD3-211ENST00000476215 LIMS3P0CW19 117 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 LIMS4P0CW20 117 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 KCNJ3P48549 501 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 ETV1P50549 477 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 GTF2A1P52655 376 aaPredicted RBP1.89□□□□□ -2.11
PTCD3-211ENST00000476215 RSU1Q15404 277 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 HLA-DRB5Q30154 266 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 CCDC58Q4VC31 144 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 DEFB121Q5J5C9 76 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 LPCAT4Q643R3 524 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 C10orf99Q6UWK7 81 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 CCDC121Q6ZUS5 278 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 TRAPPC6BQ86SZ2 158 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 PXT1Q8NFP0 134 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 OR51A4Q8NGJ6 313 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 OR5AK2Q8NH90 309 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 HAVCR2Q8TDQ0 301 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 LEAP2Q969E1 77 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 BABAM2Q9NXR7 383 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 IDI2-AS1Q9NZ38 188 aa1.89□□□□□ -2.11
PTCD3-211ENST00000476215 DSCAML1Q8TD84 2053 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 B4DEV8 164 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 H0YJX3 145 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 K7EIL1 84 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 GEMIN2O14893 280 aaKnown RBP1.88□□□□□ -2.11
PTCD3-211ENST00000476215 PIN1P1O15428 100 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 DENRO43583 198 aaKnown RBP1.88□□□□□ -2.11
PTCD3-211ENST00000476215 ORC5O43913 435 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 IGHV3-7P01780 117 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 PSMA1P25786 263 aaKnown RBP1.88□□□□□ -2.11
PTCD3-211ENST00000476215 OR10A3P58181 314 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 RAB31Q13636 194 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 DIAPH2-AS1Q14236 149 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 HES1Q14469 280 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 LTC4SQ16873 150 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 PIGYQ3MUY2 71 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 XAF1Q6GPH4 301 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 EBLN2Q6P2I7 272 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 RPL22L1Q6P5R6 122 aaKnown RBP1.88□□□□□ -2.11
PTCD3-211ENST00000476215 Q6ZRU5 148 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 LINC00311Q8N616 119 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 Q8N6K4 173 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 C5orf56Q8N8D9 126 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 OR4X2Q8NGF9 303 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 OR51A2Q8NGJ7 313 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms