RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 COX7A2P2O60397 106 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 SERF1AO75920 110 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 IGKV1-16P04430 117 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 REG1AP05451 166 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 C8orf88P0DMB2 117 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 AREGP15514 252 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 CRISP2P16562 243 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 HOXD3P31249 432 aaPredicted RBP3.23□□□□□ -1.89
VPS13D-206ENST00000476045 GNG4P50150 75 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 TPPP2P59282 170 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 RAB4BP61018 213 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 YPEL3P61236 119 aaPredicted RBP3.23□□□□□ -1.89
VPS13D-206ENST00000476045 DIAPH2-AS1Q14236 149 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 PLGLAQ15195 96 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 POU2AF1Q16633 256 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 IQCJQ1A5X6 159 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 TIGITQ495A1 244 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 C2orf83Q53S99 150 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 HIST2H2BDQ6DRA6 164 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 MRPL54Q6P161 138 aaKnown RBP3.23□□□□□ -1.89
VPS13D-206ENST00000476045 C10orf99Q6UWK7 81 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 TOMM20LQ6UXN7 152 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 ZNF705AQ6ZN79 300 aaPredicted RBP3.23□□□□□ -1.89
VPS13D-206ENST00000476045 MMD2Q8IY49 270 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 NHLRC2Q8NBF2 726 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 OR1L8Q8NGR8 309 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 FLYWCH2Q96CP2 140 aaKnown RBP3.23□□□□□ -1.89
VPS13D-206ENST00000476045 HARBI1Q96MB7 349 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 TMEM68Q96MH6 324 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 HSPB9Q9BQS6 159 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 FAM103A1Q9BTL3 118 aaKnown RBP3.23□□□□□ -1.89
VPS13D-206ENST00000476045 NDUFAF3Q9BU61 184 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 SLC25A2Q9BXI2 301 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 RNASE7Q9H1E1 156 aaKnown RBP3.23□□□□□ -1.89
VPS13D-206ENST00000476045 TMEM167BQ9NRX6 74 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 TP53TG3Q9ULZ0 132 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 RPH3ALQ9UNE2 315 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 U3KQK5 164 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 V9GYV3 84 aa3.23□□□□□ -1.89
VPS13D-206ENST00000476045 HUWE1Q7Z6Z7 4374 aaKnown RBP3.23□□□□□ -1.89
VPS13D-206ENST00000476045 LYSTQ99698 3801 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 IGKV1OR2-108A0A075B7D4 117 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 IGHV7-81A0A0B4J1V7 117 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 TRAV34A0A0B4J273 112 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 A0A0G2JLM5 398 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 GGTLC3B5MD39 225 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 C9JCJ5 164 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 FNDC10F2Z333 226 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 LINC01619G3V211 115 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 H0YJW9 148 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 OVOL1O14753 267 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 BRI3O95415 125 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 CA1P00915 261 aaPredicted RBP3.22□□□□□ -1.89
VPS13D-206ENST00000476045 IGLV2-8P01709 118 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 OR5G3P0C626 314 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 PYYP10082 97 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 PMCHP20382 165 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 G0S2P27469 103 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 TAS2R45P59539 299 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 TAS2R60P59551 318 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 KRTDAPP60985 99 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 SELENOTP62341 195 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 RPL8P62917 257 aaKnown RBP3.22□□□□□ -1.89
VPS13D-206ENST00000476045 GNG5P63218 68 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 UBE2L3P68036 154 aaKnown RBP3.22□□□□□ -1.89
VPS13D-206ENST00000476045 ERHP84090 104 aaKnown RBP3.22□□□□□ -1.89
VPS13D-206ENST00000476045 ECSCRQ19T08 205 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 DEFB136Q30KP8 78 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 DEFB121Q5J5C9 76 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 C1orf194Q5T5A4 169 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 SERTAD4-AS1Q5TG53 156 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 TMEM136Q6ZRR5 245 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 C19orf35Q6ZS72 473 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 ZNF491Q8N8L2 437 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 OR11H1Q8NG94 326 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 OR1N2Q8NGR9 330 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 ARPC1AQ92747 370 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 FAM167A-AS1Q96KT0 104 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 LINC00479Q96M42 142 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 ATG101Q9BSB4 218 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 C2orf88Q9BSF0 95 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 PAXXQ9BUH6 204 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 SAMD10Q9BYL1 202 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 COMMD5Q9GZQ3 224 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 ZNF430Q9H8G1 570 aaPredicted RBP3.22□□□□□ -1.89
VPS13D-206ENST00000476045 GNB4Q9HAV0 340 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 OSTCQ9NRP0 149 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 ZNF355PQ9NSJ1 428 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 BET1LQ9NYM9 111 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 MRPL36Q9P0J6 103 aaKnown RBP3.22□□□□□ -1.89
VPS13D-206ENST00000476045 NAT8BQ9UHF3 227 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 LINC00527Q9UJ94 153 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 ZNF257Q9Y2Q1 563 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 SMAD5-AS1Q9Y6J3 95 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 LY96Q9Y6Y9 160 aa3.22□□□□□ -1.89
VPS13D-206ENST00000476045 CSMD3Q7Z407 3707 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 SACSQ9NZJ4 4579 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 TRAV9-1A0A075B6T8 112 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 A0A1W2PN81 502 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 IZUMO1RA6ND01 250 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms