RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 OR8A1Q8NGG7 326 aa8.64□□□□□ -1.03
CLIP2-204ENST00000474962 MBD3L1Q8WWY6 194 aa8.64□□□□□ -1.03
CLIP2-204ENST00000474962 LINC00476Q8WZB0 136 aa8.64□□□□□ -1.03
CLIP2-204ENST00000474962 RARRES2Q99969 163 aa8.64□□□□□ -1.03
CLIP2-204ENST00000474962 ZNF705EA8MWA4 302 aaPredicted RBP8.63□□□□□ -1.03
CLIP2-204ENST00000474962 M0R3E3 92 aa8.63□□□□□ -1.03
CLIP2-204ENST00000474962 CA1P00915 261 aaPredicted RBP8.63□□□□□ -1.03
CLIP2-204ENST00000474962 SLC25A5P05141 298 aaKnown RBP8.63□□□□□ -1.03
CLIP2-204ENST00000474962 ZNF705DP0CH99 300 aaPredicted RBP8.63□□□□□ -1.03
CLIP2-204ENST00000474962 ZNF705BP0CI00 300 aaPredicted RBP8.63□□□□□ -1.03
CLIP2-204ENST00000474962 PPT1P50897 306 aa8.63□□□□□ -1.03
CLIP2-204ENST00000474962 CNN1P51911 297 aaKnown RBP8.63□□□□□ -1.03
CLIP2-204ENST00000474962 OR11H2Q8NH07 326 aa8.63□□□□□ -1.03
CLIP2-204ENST00000474962 C1QTNF4Q9BXJ3 329 aa8.63□□□□□ -1.03
CLIP2-204ENST00000474962 NKX6-2Q9C056 277 aaPredicted RBP8.63□□□□□ -1.03
CLIP2-204ENST00000474962 TMPRSS5Q9H3S3 457 aa8.63□□□□□ -1.03
CLIP2-204ENST00000474962 RPH3ALQ9UNE2 315 aa8.63□□□□□ -1.03
CLIP2-204ENST00000474962 NUPR2A6NF83 97 aa8.62□□□□□ -1.03
CLIP2-204ENST00000474962 K7EQM0 130 aa8.62□□□□□ -1.03
CLIP2-204ENST00000474962 DEFB4AO15263 64 aa8.62□□□□□ -1.03
CLIP2-204ENST00000474962 IFNA7P01567 189 aa8.62□□□□□ -1.03
CLIP2-204ENST00000474962 PRB4P10163 310 aaPredicted RBP8.62□□□□□ -1.03
CLIP2-204ENST00000474962 UBE2G2P60604 165 aa8.62□□□□□ -1.03
CLIP2-204ENST00000474962 SUMO1P63165 101 aaKnown RBP8.62□□□□□ -1.03
CLIP2-204ENST00000474962 BLOC1S1P78537 153 aa8.62□□□□□ -1.03
CLIP2-204ENST00000474962 TMEM78Q5T7P6 136 aa8.62□□□□□ -1.03
CLIP2-204ENST00000474962 PHLDA1Q8WV24 401 aaPredicted RBP8.62□□□□□ -1.03
CLIP2-204ENST00000474962 A0A1W2PRE2 83 aa8.61□□□□□ -1.03
CLIP2-204ENST00000474962 PRAC2D3DTV9 90 aa8.61□□□□□ -1.03
CLIP2-204ENST00000474962 LCE2BO14633 110 aa8.61□□□□□ -1.03
CLIP2-204ENST00000474962 GIG44P09565 113 aaPredicted RBP8.61□□□□□ -1.03
CLIP2-204ENST00000474962 TSPOP30536 169 aa8.61□□□□□ -1.03
CLIP2-204ENST00000474962 NANOS2P60321 138 aaKnown RBP8.61□□□□□ -1.03
CLIP2-204ENST00000474962 CST9LP1Q5W188 147 aa8.61□□□□□ -1.03
CLIP2-204ENST00000474962 SUN5Q8TC36 379 aa8.61□□□□□ -1.03
CLIP2-204ENST00000474962 LINC00477Q96M19 166 aa8.61□□□□□ -1.03
CLIP2-204ENST00000474962 CLUHP3Q96NS8 147 aa8.61□□□□□ -1.03
CLIP2-204ENST00000474962 KRTAP17-1Q9BYP8 105 aa8.61□□□□□ -1.03
CLIP2-204ENST00000474962 F6UZH7 168 aa8.6□□□□□ -1.03
CLIP2-204ENST00000474962 AMBPP02760 352 aa8.6□□□□□ -1.03
CLIP2-204ENST00000474962 FXYD7P58549 80 aa8.6□□□□□ -1.03
CLIP2-204ENST00000474962 C5orf17Q8NAS9 161 aa8.6□□□□□ -1.03
CLIP2-204ENST00000474962 XCL2Q9UBD3 114 aa8.6□□□□□ -1.03
CLIP2-204ENST00000474962 KLK5Q9Y337 293 aaPredicted RBP8.6□□□□□ -1.03
CLIP2-204ENST00000474962 IGKV2-40A0A087WW87 121 aaPredicted RBP8.59□□□□□ -1.03
CLIP2-204ENST00000474962 TRAV1-1A0A0B4J248 108 aa8.59□□□□□ -1.03
CLIP2-204ENST00000474962 SERTM2A0A1B0GWG4 89 aa8.59□□□□□ -1.03
CLIP2-204ENST00000474962 RBAKDNA6NC62 111 aa8.59□□□□□ -1.03
CLIP2-204ENST00000474962 DIRC3C9JPN6 131 aa8.59□□□□□ -1.03
CLIP2-204ENST00000474962 IFNA1P01562 189 aa8.59□□□□□ -1.03
CLIP2-204ENST00000474962 IGKV2D-40P01614 121 aaPredicted RBP8.59□□□□□ -1.03
CLIP2-204ENST00000474962 LEPP41159 167 aa8.59□□□□□ -1.03
CLIP2-204ENST00000474962 GOLT1AQ6ZVE7 132 aa8.59□□□□□ -1.03
CLIP2-204ENST00000474962 ARL6IP6Q8N6S5 226 aa8.59□□□□□ -1.03
CLIP2-204ENST00000474962 C11orf45Q8TAV5 145 aa8.59□□□□□ -1.03
CLIP2-204ENST00000474962 SLC35B3Q9H1N7 401 aa8.59□□□□□ -1.03
CLIP2-204ENST00000474962 VPS13DQ5THJ4 4388 aa8.59□□□□□ -1.03
CLIP2-204ENST00000474962 FAM74A7A6NL05 159 aa8.58□□□□□ -1.04
CLIP2-204ENST00000474962 NPIPB6E9PJ23 425 aa8.58□□□□□ -1.04
CLIP2-204ENST00000474962 PAGE4O60829 102 aa8.58□□□□□ -1.04
CLIP2-204ENST00000474962 CDKN1BP46527 198 aa8.58□□□□□ -1.04
CLIP2-204ENST00000474962 TNP2Q05952 138 aa8.58□□□□□ -1.04
CLIP2-204ENST00000474962 ERCC8Q13216 396 aa8.58□□□□□ -1.04
CLIP2-204ENST00000474962 SPINK13Q1W4C9 94 aa8.58□□□□□ -1.04
CLIP2-204ENST00000474962 TEX261Q6UWH6 196 aa8.58□□□□□ -1.04
CLIP2-204ENST00000474962 C9orf47Q6ZRZ4 202 aa8.58□□□□□ -1.04
CLIP2-204ENST00000474962 TMEM208Q9BTX3 173 aa8.58□□□□□ -1.04
CLIP2-204ENST00000474962 MANBALQ9NQG1 85 aa8.58□□□□□ -1.04
CLIP2-204ENST00000474962 GNG13Q9P2W3 67 aa8.58□□□□□ -1.04
CLIP2-204ENST00000474962 EPDR1Q9UM22 224 aa8.58□□□□□ -1.04
CLIP2-204ENST00000474962 YTHDF2Q9Y5A9 579 aaKnown RBP8.58□□□□□ -1.04
CLIP2-204ENST00000474962 ARL2-SNX15V9GYD0 113 aa8.58□□□□□ -1.04
CLIP2-204ENST00000474962 DNAH10Q8IVF4 4471 aa8.57□□□□□ -1.04
CLIP2-204ENST00000474962 M0R2Z0 102 aa8.57□□□□□ -1.04
CLIP2-204ENST00000474962 TCRAP04437 139 aa8.57□□□□□ -1.04
CLIP2-204ENST00000474962 ZNF138P52744 262 aa8.57□□□□□ -1.04
CLIP2-204ENST00000474962 GNG5P63218 68 aa8.57□□□□□ -1.04
CLIP2-204ENST00000474962 HIST1H2BAQ96A08 127 aa8.57□□□□□ -1.04
CLIP2-204ENST00000474962 VGLL1Q99990 258 aa8.57□□□□□ -1.04
CLIP2-204ENST00000474962 NDFIP1Q9BT67 221 aa8.57□□□□□ -1.04
CLIP2-204ENST00000474962 AGPAT4-IT1Q9H0P7 198 aa8.57□□□□□ -1.04
CLIP2-204ENST00000474962 GOLT1BQ9Y3E0 138 aa8.57□□□□□ -1.04
CLIP2-204ENST00000474962 IGHV3OR16-12A0A075B7B8 117 aa8.56□□□□□ -1.04
CLIP2-204ENST00000474962 FBLL1A6NHQ2 334 aaKnown RBP8.56□□□□□ -1.04
CLIP2-204ENST00000474962 A8MTW9 85 aa8.56□□□□□ -1.04
CLIP2-204ENST00000474962 GGTLC3B5MD39 225 aa8.56□□□□□ -1.04
CLIP2-204ENST00000474962 J3KRW8 73 aa8.56□□□□□ -1.04
CLIP2-204ENST00000474962 INSP01308 110 aa8.56□□□□□ -1.04
CLIP2-204ENST00000474962 GPX1P07203 203 aa8.56□□□□□ -1.04
CLIP2-204ENST00000474962 RBMY1A1P0DJD3 496 aaKnown RBP8.56□□□□□ -1.04
CLIP2-204ENST00000474962 RBMY1CP0DJD4 496 aa8.56□□□□□ -1.04
CLIP2-204ENST00000474962 CT45A10P0DMU9 189 aa8.56□□□□□ -1.04
CLIP2-204ENST00000474962 TAGLN2P37802 199 aaKnown RBP8.56□□□□□ -1.04
CLIP2-204ENST00000474962 RBMY1FQ15415 496 aaKnown RBP8.56□□□□□ -1.04
CLIP2-204ENST00000474962 AMTNQ6UX39 209 aa8.56□□□□□ -1.04
CLIP2-204ENST00000474962 CYB561D1Q8N8Q1 229 aa8.56□□□□□ -1.04
CLIP2-204ENST00000474962 ZNF680Q8NEM1 530 aa8.56□□□□□ -1.04
CLIP2-204ENST00000474962 ODF3Q96PU9 254 aa8.56□□□□□ -1.04
CLIP2-204ENST00000474962 TXNDC17Q9BRA2 123 aa8.56□□□□□ -1.04
CLIP2-204ENST00000474962 TCEAL7Q9BRU2 100 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms