RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 SLIRPQ9GZT3 109 aaKnown RBP6.25□□□□□ -1.41
VCL-204ENST00000472585 AGPAT4-IT1Q9H0P7 198 aa6.25□□□□□ -1.41
VCL-204ENST00000472585 MSRB1Q9NZV6 116 aa6.25□□□□□ -1.41
VCL-204ENST00000472585 LY96Q9Y6Y9 160 aa6.25□□□□□ -1.41
VCL-204ENST00000472585 PSCAO43653 123 aa6.24□□□□□ -1.41
VCL-204ENST00000472585 SSSCA1O60232 199 aa6.24□□□□□ -1.41
VCL-204ENST00000472585 S100A7P31151 101 aa6.24□□□□□ -1.41
VCL-204ENST00000472585 LEPP41159 167 aa6.24□□□□□ -1.41
VCL-204ENST00000472585 TCL1AP56279 114 aa6.24□□□□□ -1.41
VCL-204ENST00000472585 ANXA2RQ3ZCQ2 193 aa6.24□□□□□ -1.41
VCL-204ENST00000472585 ANKRD39Q53RE8 183 aa6.24□□□□□ -1.41
VCL-204ENST00000472585 BPIFA4PQ86YQ2 179 aa6.24□□□□□ -1.41
VCL-204ENST00000472585 KRTAP19-1Q8IUB9 90 aa6.24□□□□□ -1.41
VCL-204ENST00000472585 ST6GAL2Q96JF0 529 aa6.24□□□□□ -1.41
VCL-204ENST00000472585 MRPL16Q9NX20 251 aaKnown RBP6.24□□□□□ -1.41
VCL-204ENST00000472585 CCDC59Q9P031 241 aaKnown RBP6.24□□□□□ -1.41
VCL-204ENST00000472585 RSL24D1Q9UHA3 163 aaKnown RBP6.24□□□□□ -1.41
VCL-204ENST00000472585 HHLA3Q9XRX5 114 aa6.24□□□□□ -1.41
VCL-204ENST00000472585 ICOSQ9Y6W8 199 aa6.24□□□□□ -1.41
VCL-204ENST00000472585 C9orf170A2RU37 121 aa6.23□□□□□ -1.41
VCL-204ENST00000472585 C7orf71A4D174 169 aa6.23□□□□□ -1.41
VCL-204ENST00000472585 FABP12A6NFH5 140 aa6.23□□□□□ -1.41
VCL-204ENST00000472585 FNDC10F2Z333 226 aa6.23□□□□□ -1.41
VCL-204ENST00000472585 K7EP13 123 aa6.23□□□□□ -1.41
VCL-204ENST00000472585 K7EQD1 137 aa6.23□□□□□ -1.41
VCL-204ENST00000472585 NDUFB4O95168 129 aa6.23□□□□□ -1.41
VCL-204ENST00000472585 SLC25A5P05141 298 aaKnown RBP6.23□□□□□ -1.41
VCL-204ENST00000472585 EVI2AP22794 236 aa6.23□□□□□ -1.41
VCL-204ENST00000472585 RNASE4P34096 147 aaKnown RBP6.23□□□□□ -1.41
VCL-204ENST00000472585 LCE3BQ5TA77 95 aa6.23□□□□□ -1.41
VCL-204ENST00000472585 EIF4E3Q8N5X7 224 aaKnown RBP6.23□□□□□ -1.41
VCL-204ENST00000472585 MRPL32Q9BYC8 188 aaKnown RBP6.23□□□□□ -1.41
VCL-204ENST00000472585 RABL2AQ9UBK7 228 aaPredicted RBP6.23□□□□□ -1.41
VCL-204ENST00000472585 PRO0255Q9UI72 69 aa6.23□□□□□ -1.41
VCL-204ENST00000472585 FAT3Q8TDW7 4589 aa6.23□□□□□ -1.41
VCL-204ENST00000472585 E5RGE8 158 aa6.22□□□□□ -1.41
VCL-204ENST00000472585 GOSR2O14653 212 aa6.22□□□□□ -1.41
VCL-204ENST00000472585 C1QBP02746 253 aa6.22□□□□□ -1.41
VCL-204ENST00000472585 SFTA3P0C7M3 94 aa6.22□□□□□ -1.41
VCL-204ENST00000472585 MRPL23Q16540 153 aaKnown RBP6.22□□□□□ -1.41
VCL-204ENST00000472585 PXDC1Q5TGL8 231 aa6.22□□□□□ -1.41
VCL-204ENST00000472585 MIC13Q5XKP0 118 aa6.22□□□□□ -1.41
VCL-204ENST00000472585 NEGR1Q7Z3B1 354 aa6.22□□□□□ -1.41
VCL-204ENST00000472585 ZFAND2AQ8N6M9 145 aa6.22□□□□□ -1.41
VCL-204ENST00000472585 RAB2BQ8WUD1 216 aa6.22□□□□□ -1.41
VCL-204ENST00000472585 ZNF479Q96JC4 524 aa6.22□□□□□ -1.41
VCL-204ENST00000472585 DNAJC4Q9NNZ3 241 aa6.22□□□□□ -1.41
VCL-204ENST00000472585 AP5S1Q9NUS5 200 aa6.22□□□□□ -1.41
VCL-204ENST00000472585 FLVCR2Q9UPI3 526 aa6.22□□□□□ -1.41
VCL-204ENST00000472585 RCL1Q9Y2P8 373 aaKnown RBP6.22□□□□□ -1.41
VCL-204ENST00000472585 PXMP4Q9Y6I8 212 aa6.22□□□□□ -1.41
VCL-204ENST00000472585 V9GYH0 126 aa6.22□□□□□ -1.41
VCL-204ENST00000472585 TRBV19A0A075B6N1 114 aa6.21□□□□□ -1.42
VCL-204ENST00000472585 C7orf66A4D0T2 115 aa6.21□□□□□ -1.42
VCL-204ENST00000472585 COX7A2P2O60397 106 aa6.21□□□□□ -1.42
VCL-204ENST00000472585 CRISP2P16562 243 aa6.21□□□□□ -1.42
VCL-204ENST00000472585 KRTAP10-4P60372 401 aaPredicted RBP6.21□□□□□ -1.42
VCL-204ENST00000472585 WFDC2Q14508 124 aa6.21□□□□□ -1.42
VCL-204ENST00000472585 C10orf113Q5VZT2 155 aa6.21□□□□□ -1.42
VCL-204ENST00000472585 EXOC3-AS1Q8N2X6 119 aa6.21□□□□□ -1.42
VCL-204ENST00000472585 ZNF680Q8NEM1 530 aa6.21□□□□□ -1.42
VCL-204ENST00000472585 OR10P1Q8NGE3 313 aa6.21□□□□□ -1.42
VCL-204ENST00000472585 MCFD2Q8NI22 146 aa6.21□□□□□ -1.42
VCL-204ENST00000472585 ANAPC16Q96DE5 110 aa6.21□□□□□ -1.42
VCL-204ENST00000472585 VGLL1Q99990 258 aa6.21□□□□□ -1.42
VCL-204ENST00000472585 SLC25A21Q9BQT8 299 aaPredicted RBP6.21□□□□□ -1.42
VCL-204ENST00000472585 PIGBOS1A0A0B4J2F0 54 aa6.2□□□□□ -1.42
VCL-204ENST00000472585 LOC100131303A0A0U1RQF7 123 aa6.2□□□□□ -1.42
VCL-204ENST00000472585 MPDU1O75352 247 aa6.2□□□□□ -1.42
VCL-204ENST00000472585 MBPP02686 304 aaPredicted RBP6.2□□□□□ -1.42
VCL-204ENST00000472585 OR4E1P0C645 316 aa6.2□□□□□ -1.42
VCL-204ENST00000472585 IBA57Q5T440 356 aaKnown RBP6.2□□□□□ -1.42
VCL-204ENST00000472585 ZNF546Q86UE3 836 aa6.2□□□□□ -1.42
VCL-204ENST00000472585 TOMM5Q8N4H5 51 aa6.2□□□□□ -1.42
VCL-204ENST00000472585 C11orf1Q9H5F2 150 aa6.2□□□□□ -1.42
VCL-204ENST00000472585 IGHV1OR15-1A0A075B7D0 117 aa6.19□□□□□ -1.42
VCL-204ENST00000472585 IGKV2-40A0A087WW87 121 aaPredicted RBP6.19□□□□□ -1.42
VCL-204ENST00000472585 ZNF253O75346 499 aa6.19□□□□□ -1.42
VCL-204ENST00000472585 IGKV2D-40P01614 121 aaPredicted RBP6.19□□□□□ -1.42
VCL-204ENST00000472585 GPX1P07203 203 aa6.19□□□□□ -1.42
VCL-204ENST00000472585 CRYGDP07320 174 aa6.19□□□□□ -1.42
VCL-204ENST00000472585 PYYP10082 97 aa6.19□□□□□ -1.42
VCL-204ENST00000472585 GYPEP15421 78 aa6.19□□□□□ -1.42
VCL-204ENST00000472585 CAMLGP49069 296 aa6.19□□□□□ -1.42
VCL-204ENST00000472585 TAS2R30P59541 319 aa6.19□□□□□ -1.42
VCL-204ENST00000472585 UBE2MP61081 183 aaKnown RBP6.19□□□□□ -1.42
VCL-204ENST00000472585 PYDC2Q56P42 97 aa6.19□□□□□ -1.42
VCL-204ENST00000472585 GCSAMLQ5JQS6 135 aa6.19□□□□□ -1.42
VCL-204ENST00000472585 C9orf47Q6ZRZ4 202 aa6.19□□□□□ -1.42
VCL-204ENST00000472585 NRARPQ7Z6K4 114 aa6.19□□□□□ -1.42
VCL-204ENST00000472585 S100A7AQ86SG5 101 aa6.19□□□□□ -1.42
VCL-204ENST00000472585 IQCF2Q8IXL9 164 aa6.19□□□□□ -1.42
VCL-204ENST00000472585 C10orf126Q8N4M7 172 aa6.19□□□□□ -1.42
VCL-204ENST00000472585 Q8N814 137 aa6.19□□□□□ -1.42
VCL-204ENST00000472585 LINC00477Q96M19 166 aa6.19□□□□□ -1.42
VCL-204ENST00000472585 GGACTQ9BVM4 153 aa6.19□□□□□ -1.42
VCL-204ENST00000472585 MGAT4CQ9UBM8 478 aa6.19□□□□□ -1.42
VCL-204ENST00000472585 RNF213Q63HN8 5207 aa6.19□□□□□ -1.42
VCL-204ENST00000472585 H3BMQ9 156 aa6.18□□□□□ -1.42
VCL-204ENST00000472585 TSC22D2O75157 780 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms