RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 ZNRF1Q8ND25 227 aa3.34□□□□□ -1.88
VPS50-210ENST00000471188 PIFOQ8TCI5 191 aa3.34□□□□□ -1.88
VPS50-210ENST00000471188 TRGV9Q99603 122 aa3.34□□□□□ -1.88
VPS50-210ENST00000471188 NGBQ9NPG2 151 aa3.34□□□□□ -1.88
VPS50-210ENST00000471188 C21orf62Q9NYP8 219 aa3.34□□□□□ -1.88
VPS50-210ENST00000471188 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.33□□□□□ -1.88
VPS50-210ENST00000471188 A0A1W2PPC4 97 aa3.33□□□□□ -1.88
VPS50-210ENST00000471188 M0R3E3 92 aa3.33□□□□□ -1.88
VPS50-210ENST00000471188 TIMM8AO60220 97 aaPredicted RBP3.33□□□□□ -1.88
VPS50-210ENST00000471188 SAA1P0DJI8 122 aaPredicted RBP3.33□□□□□ -1.88
VPS50-210ENST00000471188 PRDX2P32119 198 aa3.33□□□□□ -1.88
VPS50-210ENST00000471188 EFNA4P52798 201 aa3.33□□□□□ -1.88
VPS50-210ENST00000471188 FAM57AQ8TBR7 257 aa3.33□□□□□ -1.88
VPS50-210ENST00000471188 KRTAP4-7Q9BYR0 210 aa3.33□□□□□ -1.88
VPS50-210ENST00000471188 MRPL36Q9P0J6 103 aaKnown RBP3.33□□□□□ -1.88
VPS50-210ENST00000471188 TRAV25A0A0B4J276 109 aa3.33□□□□□ -1.88
VPS50-210ENST00000471188 OOSP1A8MZH6 123 aa3.33□□□□□ -1.88
VPS50-210ENST00000471188 GAS8-AS1O95177 125 aa3.33□□□□□ -1.88
VPS50-210ENST00000471188 IGHV4-39P01824 125 aa3.33□□□□□ -1.88
VPS50-210ENST00000471188 LCE1DQ5T752 114 aa3.33□□□□□ -1.88
VPS50-210ENST00000471188 ZNF493Q6ZR52 646 aa3.33□□□□□ -1.88
VPS50-210ENST00000471188 TRPT1Q86TN4 253 aaKnown RBP3.33□□□□□ -1.88
VPS50-210ENST00000471188 RASL10AQ92737 203 aa3.33□□□□□ -1.88
VPS50-210ENST00000471188 C8orf49Q96NF6 230 aa3.33□□□□□ -1.88
VPS50-210ENST00000471188 TMEM133Q9H2Q1 129 aa3.33□□□□□ -1.88
VPS50-210ENST00000471188 EDA2RQ9HAV5 297 aa3.33□□□□□ -1.88
VPS50-210ENST00000471188 NXT2Q9NPJ8 142 aaKnown RBP3.33□□□□□ -1.88
VPS50-210ENST00000471188 OTORQ9NRC9 128 aa3.33□□□□□ -1.88
VPS50-210ENST00000471188 MSRB1Q9NZV6 116 aa3.33□□□□□ -1.88
VPS50-210ENST00000471188 ZNRD1Q9P1U0 126 aa3.33□□□□□ -1.88
VPS50-210ENST00000471188 ROS1P08922 2347 aa3.33□□□□□ -1.88
VPS50-210ENST00000471188 TEX49A0A1B0GTD5 131 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 LMO7DNF2Z398 122 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 TNFRSF6BO95407 300 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 ORM1P02763 201 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 LGALS1P09382 135 aaKnown RBP3.32□□□□□ -1.88
VPS50-210ENST00000471188 MAGEA5P43359 124 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 MZT1Q08AG7 82 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 FAM19A5Q7Z5A7 132 aaPredicted RBP3.32□□□□□ -1.88
VPS50-210ENST00000471188 Q8N1Y9 231 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 DNAJC30Q96LL9 226 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 ZMAT4Q9H898 229 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 RPUSD1Q9UJJ7 312 aaKnown RBP3.32□□□□□ -1.88
VPS50-210ENST00000471188 HIGD1AQ9Y241 93 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 IGLV3-12A0A075B6K2 115 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 FAM236AA0A1B0GUQ0 79 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 FAM236BA0A1B0GV22 79 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 A0A1W2PPI3 338 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 E7EUB6 86 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 H3BS24 57 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 NPFFO15130 113 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 CD7P09564 240 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 SLC25A16P16260 332 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 PLNP26678 52 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 CRIP2P52943 208 aaPredicted RBP3.32□□□□□ -1.88
VPS50-210ENST00000471188 B3GALT5-AS1P59052 145 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 CD177Q8N6Q3 437 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 C17orf77Q96MU5 243 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 PRADC1Q9BSG0 188 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 KLK5Q9Y337 293 aaPredicted RBP3.32□□□□□ -1.88
VPS50-210ENST00000471188 REV3LO60673 3130 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 IGKV1D-37A0A075B6S9 117 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 GP9P14770 177 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 CRIP1P50238 77 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 ATP5IP56385 69 aaPredicted RBP3.32□□□□□ -1.88
VPS50-210ENST00000471188 UBE2D3P61077 147 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 UBE2D2P62837 147 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 ADIPOQQ15848 244 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 KLHL30-AS1Q8NEE0 82 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 DEFB108BQ8NET1 73 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 OR13C6PQ8NH95 151 aa3.32□□□□□ -1.88
VPS50-210ENST00000471188 WDFY4Q6ZS81 3184 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 J3KT08 172 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 SH2D1AO60880 128 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 SS18L1O75177 396 aaPredicted RBP3.31□□□□□ -1.88
VPS50-210ENST00000471188 IGLV2-11P01706 119 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 HERVK_113P61574 105 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 WT1-ASQ06250 92 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 PCOLCEQ15113 449 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 PMVKQ15126 192 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 PRR30Q53SZ7 412 aaPredicted RBP3.31□□□□□ -1.88
VPS50-210ENST00000471188 Q6Q795 121 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 NDUFA11Q86Y39 141 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 KLF14Q8TD94 323 aaPredicted RBP3.31□□□□□ -1.88
VPS50-210ENST00000471188 PLEKHB2Q96CS7 222 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 U3KQK5 164 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 EYSQ5T1H1 3165 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 F8VRH5 84 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 H7C1H1 209 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 MFAP4P55083 255 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 HERVK_113P63121 156 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 MRPS21P82921 87 aaKnown RBP3.31□□□□□ -1.88
VPS50-210ENST00000471188 PAX8Q06710 450 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 FAM90A1Q86YD7 464 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 TMEM75Q8N9X5 138 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 GATD1Q8NB37 220 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 TIMD4Q96H15 378 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 RITA1Q96K30 269 aa3.31□□□□□ -1.88
VPS50-210ENST00000471188 SLC25A39Q9BZJ4 359 aaPredicted RBP3.31□□□□□ -1.88
VPS50-210ENST00000471188 CXXC4Q9H2H0 198 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms