RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 PEA15Q15121 130 aa6.63□□□□□ -1.35
SF3A1-206ENST00000471037 UQCC3Q6UW78 93 aa6.63□□□□□ -1.35
SF3A1-206ENST00000471037 COMMD7Q86VX2 200 aa6.63□□□□□ -1.35
SF3A1-206ENST00000471037 ARL6IP6Q8N6S5 226 aa6.63□□□□□ -1.35
SF3A1-206ENST00000471037 DCANP1Q8TF63 244 aa6.63□□□□□ -1.35
SF3A1-206ENST00000471037 MRPL53Q96EL3 112 aaKnown RBP6.63□□□□□ -1.35
SF3A1-206ENST00000471037 C16orf92Q96LL3 132 aa6.63□□□□□ -1.35
SF3A1-206ENST00000471037 EIF5A2Q9GZV4 153 aaKnown RBP6.63□□□□□ -1.35
SF3A1-206ENST00000471037 PGPA6NDG6 321 aa6.62□□□□□ -1.35
SF3A1-206ENST00000471037 F6UZH7 168 aa6.62□□□□□ -1.35
SF3A1-206ENST00000471037 K7EQG2 157 aa6.62□□□□□ -1.35
SF3A1-206ENST00000471037 PDE6DO43924 150 aa6.62□□□□□ -1.35
SF3A1-206ENST00000471037 ATP5G3P48201 142 aa6.62□□□□□ -1.35
SF3A1-206ENST00000471037 SNRPD3P62318 126 aaKnown RBP6.62□□□□□ -1.35
SF3A1-206ENST00000471037 SUMO1P63165 101 aaKnown RBP6.62□□□□□ -1.35
SF3A1-206ENST00000471037 ICAM4Q14773 271 aa6.62□□□□□ -1.35
SF3A1-206ENST00000471037 CCDC28AQ8IWP9 274 aa6.62□□□□□ -1.35
SF3A1-206ENST00000471037 GBGT1Q8N5D6 347 aa6.62□□□□□ -1.35
SF3A1-206ENST00000471037 EIF4E3Q8N5X7 224 aaKnown RBP6.62□□□□□ -1.35
SF3A1-206ENST00000471037 C5orf17Q8NAS9 161 aa6.62□□□□□ -1.35
SF3A1-206ENST00000471037 CMTM2Q8TAZ6 248 aa6.62□□□□□ -1.35
SF3A1-206ENST00000471037 RXFP4Q8TDU9 374 aa6.62□□□□□ -1.35
SF3A1-206ENST00000471037 RARRES2Q99969 163 aa6.62□□□□□ -1.35
SF3A1-206ENST00000471037 CSTL1Q9H114 145 aa6.62□□□□□ -1.35
SF3A1-206ENST00000471037 PCLOQ9Y6V0 5065 aa6.61□□□□□ -1.35
SF3A1-206ENST00000471037 KIAA1109Q2LD37 5005 aa6.61□□□□□ -1.35
SF3A1-206ENST00000471037 TRAV8-2A0A0B4J237 113 aa6.61□□□□□ -1.35
SF3A1-206ENST00000471037 SERTM2A0A1B0GWG4 89 aa6.61□□□□□ -1.35
SF3A1-206ENST00000471037 TMEM250H0YL14 139 aa6.61□□□□□ -1.35
SF3A1-206ENST00000471037 SLC25A5P05141 298 aaKnown RBP6.61□□□□□ -1.35
SF3A1-206ENST00000471037 CSN1S1P47710 185 aa6.61□□□□□ -1.35
SF3A1-206ENST00000471037 TFPI2P48307 235 aa6.61□□□□□ -1.35
SF3A1-206ENST00000471037 CMC4P56277 68 aaPredicted RBP6.61□□□□□ -1.35
SF3A1-206ENST00000471037 NANOS2P60321 138 aaKnown RBP6.61□□□□□ -1.35
SF3A1-206ENST00000471037 APRG1Q8IVJ8 170 aa6.61□□□□□ -1.35
SF3A1-206ENST00000471037 EXOC3-AS1Q8N2X6 119 aa6.61□□□□□ -1.35
SF3A1-206ENST00000471037 C11orf45Q8TAV5 145 aa6.61□□□□□ -1.35
SF3A1-206ENST00000471037 HIST1H2BAQ96A08 127 aa6.61□□□□□ -1.35
SF3A1-206ENST00000471037 C11orf52Q96A22 123 aa6.61□□□□□ -1.35
SF3A1-206ENST00000471037 M0R3E3 92 aa6.6□□□□□ -1.35
SF3A1-206ENST00000471037 PEX7O00628 323 aa6.6□□□□□ -1.35
SF3A1-206ENST00000471037 ZNF124Q15973 351 aa6.6□□□□□ -1.35
SF3A1-206ENST00000471037 PSG3Q16557 428 aa6.6□□□□□ -1.35
SF3A1-206ENST00000471037 ZNF738Q8NE65 137 aa6.6□□□□□ -1.35
SF3A1-206ENST00000471037 OR11H2Q8NH07 326 aa6.6□□□□□ -1.35
SF3A1-206ENST00000471037 C2CD4CQ8TF44 421 aa6.6□□□□□ -1.35
SF3A1-206ENST00000471037 RPUSD4Q96CM3 377 aaKnown RBP6.6□□□□□ -1.35
SF3A1-206ENST00000471037 ATG101Q9BSB4 218 aa6.6□□□□□ -1.35
SF3A1-206ENST00000471037 TREM1Q9NP99 234 aa6.6□□□□□ -1.35
SF3A1-206ENST00000471037 EPDR1Q9UM22 224 aa6.6□□□□□ -1.35
SF3A1-206ENST00000471037 DNAH6Q9C0G6 4158 aa6.6□□□□□ -1.35
SF3A1-206ENST00000471037 SCO2A0A1W2PP80 73 aa6.59□□□□□ -1.35
SF3A1-206ENST00000471037 FBLL1A6NHQ2 334 aaKnown RBP6.59□□□□□ -1.35
SF3A1-206ENST00000471037 DIRC3C9JPN6 131 aa6.59□□□□□ -1.35
SF3A1-206ENST00000471037 K7EQM0 130 aa6.59□□□□□ -1.35
SF3A1-206ENST00000471037 TCRAP04437 139 aa6.59□□□□□ -1.35
SF3A1-206ENST00000471037 SRP19P09132 144 aaKnown RBP6.59□□□□□ -1.35
SF3A1-206ENST00000471037 ZNF688P0C7X2 276 aa6.59□□□□□ -1.35
SF3A1-206ENST00000471037 HLA-DMBP28068 263 aa6.59□□□□□ -1.35
SF3A1-206ENST00000471037 SRSF3P84103 164 aaKnown RBP6.59□□□□□ -1.35
SF3A1-206ENST00000471037 IGFL4Q6B9Z1 124 aa6.59□□□□□ -1.35
SF3A1-206ENST00000471037 RNF182Q8N6D2 247 aa6.59□□□□□ -1.35
SF3A1-206ENST00000471037 CYB561D1Q8N8Q1 229 aa6.59□□□□□ -1.35
SF3A1-206ENST00000471037 C20orf173Q96LM9 149 aa6.59□□□□□ -1.35
SF3A1-206ENST00000471037 LINC00052Q96N35 136 aa6.59□□□□□ -1.35
SF3A1-206ENST00000471037 SLC35B3Q9H1N7 401 aa6.59□□□□□ -1.35
SF3A1-206ENST00000471037 APLNQ9ULZ1 77 aa6.59□□□□□ -1.35
SF3A1-206ENST00000471037 RBAKDNA6NC62 111 aa6.58□□□□□ -1.36
SF3A1-206ENST00000471037 CA1P00915 261 aaPredicted RBP6.58□□□□□ -1.36
SF3A1-206ENST00000471037 S100A9P06702 114 aaKnown RBP6.58□□□□□ -1.36
SF3A1-206ENST00000471037 AKR1C3P42330 323 aa6.58□□□□□ -1.36
SF3A1-206ENST00000471037 CNN1P51911 297 aaKnown RBP6.58□□□□□ -1.36
SF3A1-206ENST00000471037 GNG5P63218 68 aa6.58□□□□□ -1.36
SF3A1-206ENST00000471037 PSMG4Q5JS54 123 aa6.58□□□□□ -1.36
SF3A1-206ENST00000471037 GOLT1AQ6ZVE7 132 aa6.58□□□□□ -1.36
SF3A1-206ENST00000471037 FAM24BQ8N5W8 94 aa6.58□□□□□ -1.36
SF3A1-206ENST00000471037 RPH3ALQ9UNE2 315 aa6.58□□□□□ -1.36
SF3A1-206ENST00000471037 AGRNO00468 2067 aa6.57□□□□□ -1.36
SF3A1-206ENST00000471037 ZNF705FA8MVS1 300 aaPredicted RBP6.57□□□□□ -1.36
SF3A1-206ENST00000471037 C9JQL5 133 aa6.57□□□□□ -1.36
SF3A1-206ENST00000471037 DEFB131AP59861 70 aa6.57□□□□□ -1.36
SF3A1-206ENST00000471037 TMEM183BQ1AE95 376 aa6.57□□□□□ -1.36
SF3A1-206ENST00000471037 FAM74A3Q4VXF1 159 aa6.57□□□□□ -1.36
SF3A1-206ENST00000471037 FOXI2Q6ZQN5 318 aa6.57□□□□□ -1.36
SF3A1-206ENST00000471037 SLC7A5P1Q8MH63 180 aa6.57□□□□□ -1.36
SF3A1-206ENST00000471037 TMEM75Q8N9X5 138 aa6.57□□□□□ -1.36
SF3A1-206ENST00000471037 Q8NAQ8 132 aa6.57□□□□□ -1.36
SF3A1-206ENST00000471037 OR10J6PQ8NGY7 276 aa6.57□□□□□ -1.36
SF3A1-206ENST00000471037 FMC1Q96HJ9 113 aa6.57□□□□□ -1.36
SF3A1-206ENST00000471037 KLF12Q9Y4X4 402 aa6.57□□□□□ -1.36
SF3A1-206ENST00000471037 FAT2Q9NYQ8 4349 aa6.57□□□□□ -1.36
SF3A1-206ENST00000471037 IGKV2-40A0A087WW87 121 aaPredicted RBP6.56□□□□□ -1.36
SF3A1-206ENST00000471037 TRBV6-1A0A0K0K1D8 114 aa6.56□□□□□ -1.36
SF3A1-206ENST00000471037 TMEM218A2RU14 115 aa6.56□□□□□ -1.36
SF3A1-206ENST00000471037 IGLL5B9A064 214 aa6.56□□□□□ -1.36
SF3A1-206ENST00000471037 DEFB4AO15263 64 aa6.56□□□□□ -1.36
SF3A1-206ENST00000471037 DUSP14O95147 198 aaKnown RBP6.56□□□□□ -1.36
SF3A1-206ENST00000471037 IGKV2D-40P01614 121 aaPredicted RBP6.56□□□□□ -1.36
SF3A1-206ENST00000471037 SFTA3P0C7M3 94 aa6.56□□□□□ -1.36
SF3A1-206ENST00000471037 RPL35P42766 123 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms