RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 IL4P05112 153 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 TPPP2P59282 170 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 TEX29Q8N6K0 151 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 EEF1AKMT3Q96AZ1 226 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 BTF3L4Q96K17 158 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 RCHY1Q96PM5 261 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 C20orf144Q9BQM9 153 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 SHANK2-AS3Q9BTD1 123 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 IGHV3-35A0A0C4DH35 117 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 SRP14P37108 136 aaKnown RBP6.35□□□□□ -1.39
BRCA1-208ENST00000468300 PQLC2Q6ZP29 291 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 PRSS22Q9GZN4 317 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 CDC42EP3Q9UKI2 254 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 FAM181BA6NEQ2 426 aa6.34□□□□□ -1.39
BRCA1-208ENST00000468300 GGTLC3B5MD39 225 aa6.34□□□□□ -1.39
BRCA1-208ENST00000468300 Q6ZSV7 163 aa6.34□□□□□ -1.39
BRCA1-208ENST00000468300 HIGD1AQ9Y241 93 aa6.34□□□□□ -1.39
BRCA1-208ENST00000468300 COX11Q9Y6N1 276 aa6.34□□□□□ -1.39
BRCA1-208ENST00000468300 IGHV3OR16-8A0A075B7F1 116 aa6.34□□□□□ -1.39
BRCA1-208ENST00000468300 GAGE12BA1L429 117 aa6.34□□□□□ -1.39
BRCA1-208ENST00000468300 H3BQ15 152 aa6.34□□□□□ -1.39
BRCA1-208ENST00000468300 BMPR1BO00238 502 aa6.34□□□□□ -1.39
BRCA1-208ENST00000468300 ORM1P02763 201 aa6.34□□□□□ -1.39
BRCA1-208ENST00000468300 C6orf226Q5I0X4 101 aa6.34□□□□□ -1.39
BRCA1-208ENST00000468300 USMG5Q96IX5 58 aa6.34□□□□□ -1.39
BRCA1-208ENST00000468300 NPFFR1Q9GZQ6 430 aa6.34□□□□□ -1.39
BRCA1-208ENST00000468300 SMAD5-AS1Q9Y6J3 95 aa6.34□□□□□ -1.39
BRCA1-208ENST00000468300 NSD1Q96L73 2696 aaPredicted RBP6.34□□□□□ -1.4
BRCA1-208ENST00000468300 C11orf94C9JXX5 98 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 APOHP02749 345 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-208ENST00000468300 IGLC2P0DOY2 106 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 ZNF586Q9NXT0 402 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 TMEM14CQ9P0S9 112 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 NDUFB4O95168 129 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 IGHV3-11P01762 117 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 NTF3P20783 257 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 RPS10P46783 165 aaKnown RBP6.33□□□□□ -1.4
BRCA1-208ENST00000468300 UNQ9165/PRO28630Q6UXU0 137 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 Q6ZVH6 145 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 Q71RC1 249 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-208ENST00000468300 WFDC3Q8IUB2 231 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 NDFIP1Q9BT67 221 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 PAXXQ9BUH6 204 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 DERL1Q9BUN8 251 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 U3KQE9 123 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 ARL2-SNX15V9GYD0 113 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 TRBV20OR9-2A0A075B6H5 130 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 TINCRA0A1B0GVN0 87 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 HSBP1O75506 76 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 RNASE1P07998 156 aaKnown RBP6.33□□□□□ -1.4
BRCA1-208ENST00000468300 TAS2R45P59539 299 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 RHEBQ15382 184 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 HIST3H2BBQ8N257 126 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 GNB4Q9HAV0 340 aa6.33□□□□□ -1.4
BRCA1-208ENST00000468300 SCO2A0A1W2PP80 73 aa6.32□□□□□ -1.4
BRCA1-208ENST00000468300 A0A1W2PRE2 83 aa6.32□□□□□ -1.4
BRCA1-208ENST00000468300 TMEM250H0YL14 139 aa6.32□□□□□ -1.4
BRCA1-208ENST00000468300 HILS1P60008 231 aa6.32□□□□□ -1.4
BRCA1-208ENST00000468300 GFI1BQ5VTD9 330 aa6.32□□□□□ -1.4
BRCA1-208ENST00000468300 C18orf65Q6ZTR6 163 aa6.32□□□□□ -1.4
BRCA1-208ENST00000468300 OR4X2Q8NGF9 303 aa6.32□□□□□ -1.4
BRCA1-208ENST00000468300 OR4F5Q8NH21 305 aa6.32□□□□□ -1.4
BRCA1-208ENST00000468300 OR4F4Q96R69 305 aa6.32□□□□□ -1.4
BRCA1-208ENST00000468300 MAP1LC3AQ9H492 121 aa6.32□□□□□ -1.4
BRCA1-208ENST00000468300 RPS10P5Q9NQ39 176 aa6.32□□□□□ -1.4
BRCA1-208ENST00000468300 LAMTOR2Q9Y2Q5 125 aa6.32□□□□□ -1.4
BRCA1-208ENST00000468300 BLNKQ8WV28 456 aa6.32□□□□□ -1.4
BRCA1-208ENST00000468300 C11orf52Q96A22 123 aa6.32□□□□□ -1.4
BRCA1-208ENST00000468300 TMEM167BQ9NRX6 74 aa6.32□□□□□ -1.4
BRCA1-208ENST00000468300 SETXQ7Z333 2677 aaKnown RBP6.32□□□□□ -1.4
BRCA1-208ENST00000468300 INAFM1C9JVW0 142 aa6.31□□□□□ -1.4
BRCA1-208ENST00000468300 CD99P14209 185 aa6.31□□□□□ -1.4
BRCA1-208ENST00000468300 UBE2L3P68036 154 aaKnown RBP6.31□□□□□ -1.4
BRCA1-208ENST00000468300 OR10J3Q5JRS4 329 aa6.31□□□□□ -1.4
BRCA1-208ENST00000468300 PARLQ9H300 379 aa6.31□□□□□ -1.4
BRCA1-208ENST00000468300 H3BTX0 84 aa6.31□□□□□ -1.4
BRCA1-208ENST00000468300 BUB3O43684 328 aa6.31□□□□□ -1.4
BRCA1-208ENST00000468300 SRD5A1P18405 259 aa6.31□□□□□ -1.4
BRCA1-208ENST00000468300 CRYBB3P26998 211 aa6.31□□□□□ -1.4
BRCA1-208ENST00000468300 RPL15P61313 204 aaKnown RBP6.31□□□□□ -1.4
BRCA1-208ENST00000468300 C1orf194Q5T5A4 169 aa6.31□□□□□ -1.4
BRCA1-208ENST00000468300 PKIGQ9Y2B9 76 aa6.31□□□□□ -1.4
BRCA1-208ENST00000468300 IQCJQ1A5X6 159 aa6.31□□□□□ -1.4
BRCA1-208ENST00000468300 STPG4Q8N801 248 aa6.31□□□□□ -1.4
BRCA1-208ENST00000468300 ANAPC13Q9BS18 74 aa6.31□□□□□ -1.4
BRCA1-208ENST00000468300 C16orf95Q9H693 158 aa6.31□□□□□ -1.4
BRCA1-208ENST00000468300 AURKAIP1Q9NWT8 199 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-208ENST00000468300 TRBV19A0A075B6N1 114 aa6.3□□□□□ -1.4
BRCA1-208ENST00000468300 M0R2Z0 102 aa6.3□□□□□ -1.4
BRCA1-208ENST00000468300 GCGP01275 180 aa6.3□□□□□ -1.4
BRCA1-208ENST00000468300 ELANEP08246 267 aa6.3□□□□□ -1.4
BRCA1-208ENST00000468300 IL17DQ8TAD2 202 aa6.3□□□□□ -1.4
BRCA1-208ENST00000468300 TXNDC17Q9BRA2 123 aa6.3□□□□□ -1.4
BRCA1-208ENST00000468300 SDF2L1Q9HCN8 221 aa6.3□□□□□ -1.4
BRCA1-208ENST00000468300 A0A0G2JLM5 398 aa6.3□□□□□ -1.4
BRCA1-208ENST00000468300 AWAT1Q58HT5 328 aa6.3□□□□□ -1.4
BRCA1-208ENST00000468300 GBGT1Q8N5D6 347 aa6.3□□□□□ -1.4
BRCA1-208ENST00000468300 FAM24BQ8N5W8 94 aa6.3□□□□□ -1.4
BRCA1-208ENST00000468300 FER1L6-AS1Q8NA97 138 aa6.3□□□□□ -1.4
BRCA1-208ENST00000468300 MRPL16Q9NX20 251 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms