RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 C9orf47Q6ZRZ4 202 aa10.37□□□□□ -0.75
COMMD3-206ENST00000468179 FXYD5Q96DB9 178 aa10.37□□□□□ -0.75
COMMD3-206ENST00000468179 SACSQ9NZJ4 4579 aa10.36□□□□□ -0.75
COMMD3-206ENST00000468179 TRAV12-3A0A0B4J271 114 aa10.36□□□□□ -0.75
COMMD3-206ENST00000468179 CBY3A6NI87 242 aa10.36□□□□□ -0.75
COMMD3-206ENST00000468179 SNURFLB1AK76 121 aa10.36□□□□□ -0.75
COMMD3-206ENST00000468179 J3KRW8 73 aa10.36□□□□□ -0.75
COMMD3-206ENST00000468179 PRM2P04554 102 aa10.36□□□□□ -0.75
COMMD3-206ENST00000468179 ATP5G1P05496 136 aa10.36□□□□□ -0.75
COMMD3-206ENST00000468179 GIPP09681 153 aaPredicted RBP10.36□□□□□ -0.75
COMMD3-206ENST00000468179 ATP5G3P48201 142 aa10.36□□□□□ -0.75
COMMD3-206ENST00000468179 UBE2L3P68036 154 aaKnown RBP10.36□□□□□ -0.75
COMMD3-206ENST00000468179 RGS21Q2M5E4 152 aa10.36□□□□□ -0.75
COMMD3-206ENST00000468179 FAM74A1Q5RGS3 127 aa10.36□□□□□ -0.75
COMMD3-206ENST00000468179 FAM122CQ6P4D5 195 aa10.36□□□□□ -0.75
COMMD3-206ENST00000468179 POM121L12Q8N7R1 296 aa10.36□□□□□ -0.75
COMMD3-206ENST00000468179 C15orf53Q8NAA6 179 aa10.36□□□□□ -0.75
COMMD3-206ENST00000468179 INO80EQ8NBZ0 244 aaPredicted RBP10.36□□□□□ -0.75
COMMD3-206ENST00000468179 RNASE8Q8TDE3 154 aaKnown RBP10.36□□□□□ -0.75
COMMD3-206ENST00000468179 RXFP4Q8TDU9 374 aa10.36□□□□□ -0.75
COMMD3-206ENST00000468179 AQP10Q96PS8 301 aa10.36□□□□□ -0.75
COMMD3-206ENST00000468179 AGPAT4-IT1Q9H0P7 198 aa10.36□□□□□ -0.75
COMMD3-206ENST00000468179 PLAC8L1A1L4L8 177 aa10.35□□□□□ -0.75
COMMD3-206ENST00000468179 C7orf71A4D174 169 aa10.35□□□□□ -0.75
COMMD3-206ENST00000468179 GPX1P07203 203 aa10.35□□□□□ -0.75
COMMD3-206ENST00000468179 RANP62826 216 aaKnown RBP10.35□□□□□ -0.75
COMMD3-206ENST00000468179 ERCC8Q13216 396 aa10.35□□□□□ -0.75
COMMD3-206ENST00000468179 PQLC2Q6ZP29 291 aa10.35□□□□□ -0.75
COMMD3-206ENST00000468179 LYSTQ99698 3801 aa10.35□□□□□ -0.75
COMMD3-206ENST00000468179 WFDC1Q9HC57 220 aa10.35□□□□□ -0.75
COMMD3-206ENST00000468179 NOP10Q9NPE3 64 aaKnown RBP10.35□□□□□ -0.75
COMMD3-206ENST00000468179 TRBV7-9A0A0J9YWB2 115 aa10.34□□□□□ -0.75
COMMD3-206ENST00000468179 RBAKDNA6NC62 111 aa10.34□□□□□ -0.75
COMMD3-206ENST00000468179 CRISP2P16562 243 aa10.34□□□□□ -0.75
COMMD3-206ENST00000468179 KIR3DS1Q14943 382 aa10.34□□□□□ -0.75
COMMD3-206ENST00000468179 UBE2DNLQ8IWF7 75 aa10.34□□□□□ -0.75
COMMD3-206ENST00000468179 ZNF680Q8NEM1 530 aa10.34□□□□□ -0.75
COMMD3-206ENST00000468179 FAM19A4Q96LR4 140 aa10.34□□□□□ -0.75
COMMD3-206ENST00000468179 IGKV2-40A0A087WW87 121 aaPredicted RBP10.33□□□□□ -0.76
COMMD3-206ENST00000468179 KLLNB2CW77 178 aa10.33□□□□□ -0.76
COMMD3-206ENST00000468179 F5H768 121 aa10.33□□□□□ -0.76
COMMD3-206ENST00000468179 IGKV2D-40P01614 121 aaPredicted RBP10.33□□□□□ -0.76
COMMD3-206ENST00000468179 MBP02144 154 aa10.33□□□□□ -0.76
COMMD3-206ENST00000468179 ZNF138P52744 262 aa10.33□□□□□ -0.76
COMMD3-206ENST00000468179 TNP2Q05952 138 aa10.33□□□□□ -0.76
COMMD3-206ENST00000468179 TMEM88Q6PEY1 159 aa10.33□□□□□ -0.76
COMMD3-206ENST00000468179 OR10G4Q8NGN3 311 aa10.33□□□□□ -0.76
COMMD3-206ENST00000468179 OR10G9Q8NGN4 311 aa10.33□□□□□ -0.76
COMMD3-206ENST00000468179 OR10G7Q8NGN6 311 aa10.33□□□□□ -0.76
COMMD3-206ENST00000468179 CMTM2Q8TAZ6 248 aa10.33□□□□□ -0.76
COMMD3-206ENST00000468179 PHYHIPLQ96FC7 376 aa10.33□□□□□ -0.76
COMMD3-206ENST00000468179 LINC00467Q9BRT7 94 aa10.33□□□□□ -0.76
COMMD3-206ENST00000468179 Q9H3A6 140 aa10.33□□□□□ -0.76
COMMD3-206ENST00000468179 ZNF492Q9P255 531 aa10.33□□□□□ -0.76
COMMD3-206ENST00000468179 RNASE4P34096 147 aaKnown RBP10.33□□□□□ -0.76
COMMD3-206ENST00000468179 SERF2P84101 59 aa10.33□□□□□ -0.76
COMMD3-206ENST00000468179 RNF212Q495C1 297 aa10.33□□□□□ -0.76
COMMD3-206ENST00000468179 EIF4E3Q8N5X7 224 aaKnown RBP10.33□□□□□ -0.76
COMMD3-206ENST00000468179 ARL6IP6Q8N6S5 226 aa10.33□□□□□ -0.76
COMMD3-206ENST00000468179 OR2G3Q8NGZ4 309 aa10.33□□□□□ -0.76
COMMD3-206ENST00000468179 ZNF503Q96F45 646 aa10.33□□□□□ -0.76
COMMD3-206ENST00000468179 PSMG3Q9BT73 122 aaPredicted RBP10.33□□□□□ -0.76
COMMD3-206ENST00000468179 OTORQ9NRC9 128 aa10.33□□□□□ -0.76
COMMD3-206ENST00000468179 DNAH1Q9P2D7 4330 aa10.32□□□□□ -0.76
COMMD3-206ENST00000468179 BORCS7-ASMTA0A0B4J1R7 106 aa10.32□□□□□ -0.76
COMMD3-206ENST00000468179 DAZ2Q13117 558 aaKnown RBP10.32□□□□□ -0.76
COMMD3-206ENST00000468179 ANXA2RQ3ZCQ2 193 aa10.32□□□□□ -0.76
COMMD3-206ENST00000468179 HSD17B11Q8NBQ5 300 aa10.32□□□□□ -0.76
COMMD3-206ENST00000468179 VGLL1Q99990 258 aa10.32□□□□□ -0.76
COMMD3-206ENST00000468179 LENEPQ9Y5L5 61 aa10.32□□□□□ -0.76
COMMD3-206ENST00000468179 ALMS1Q8TCU4 4167 aa10.31□□□□□ -0.76
COMMD3-206ENST00000468179 RGS13O14921 159 aa10.31□□□□□ -0.76
COMMD3-206ENST00000468179 ZNF324O75467 553 aaPredicted RBP10.31□□□□□ -0.76
COMMD3-206ENST00000468179 FAM3BP58499 235 aaPredicted RBP10.31□□□□□ -0.76
COMMD3-206ENST00000468179 RAB2AP61019 212 aa10.31□□□□□ -0.76
COMMD3-206ENST00000468179 GNPNAT1Q96EK6 184 aaPredicted RBP10.31□□□□□ -0.76
COMMD3-206ENST00000468179 PLECQ15149 4684 aaKnown RBP10.3□□□□□ -0.76
COMMD3-206ENST00000468179 FXYD6-FXYD2A0A087WZ82 144 aa10.3□□□□□ -0.76
COMMD3-206ENST00000468179 PGPA6NDG6 321 aa10.3□□□□□ -0.76
COMMD3-206ENST00000468179 DIRC3C9JPN6 131 aa10.3□□□□□ -0.76
COMMD3-206ENST00000468179 CDC34P49427 236 aaPredicted RBP10.3□□□□□ -0.76
COMMD3-206ENST00000468179 CD300CQ08708 224 aa10.3□□□□□ -0.76
COMMD3-206ENST00000468179 BTN1A1Q13410 526 aa10.3□□□□□ -0.76
COMMD3-206ENST00000468179 ZFAND2AQ8N6M9 145 aa10.3□□□□□ -0.76
COMMD3-206ENST00000468179 LINC00612Q8N6U2 182 aa10.3□□□□□ -0.76
COMMD3-206ENST00000468179 OR2T35Q8NGX2 323 aa10.3□□□□□ -0.76
COMMD3-206ENST00000468179 TMED6Q8WW62 240 aa10.3□□□□□ -0.76
COMMD3-206ENST00000468179 HYLS1Q96M11 299 aa10.3□□□□□ -0.76
COMMD3-206ENST00000468179 ATG101Q9BSB4 218 aa10.3□□□□□ -0.76
COMMD3-206ENST00000468179 TNFSF18Q9UNG2 199 aa10.3□□□□□ -0.76
COMMD3-206ENST00000468179 IGHV1OR15-1A0A075B7D0 117 aa10.29□□□□□ -0.76
COMMD3-206ENST00000468179 GAGE12BA1L429 117 aa10.29□□□□□ -0.76
COMMD3-206ENST00000468179 GAGE7O76087 117 aa10.29□□□□□ -0.76
COMMD3-206ENST00000468179 GAGE12FP0CL80 117 aa10.29□□□□□ -0.76
COMMD3-206ENST00000468179 GAGE12GP0CL81 117 aa10.29□□□□□ -0.76
COMMD3-206ENST00000468179 GAGE12IP0CL82 117 aa10.29□□□□□ -0.76
COMMD3-206ENST00000468179 ATP6V0CP27449 155 aa10.29□□□□□ -0.76
COMMD3-206ENST00000468179 IBA57Q5T440 356 aaKnown RBP10.29□□□□□ -0.76
COMMD3-206ENST00000468179 ARPC5LQ9BPX5 153 aa10.29□□□□□ -0.76
COMMD3-206ENST00000468179 ACTR3CQ9C0K3 210 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms