RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 AGPAT4-IT1Q9H0P7 198 aa9.7□□□□□ -0.86
COL4A1-202ENST00000467182 ATRQ13535 2644 aa9.7□□□□□ -0.86
COL4A1-202ENST00000467182 WNK1Q9H4A3 2382 aa9.7□□□□□ -0.86
COL4A1-202ENST00000467182 FBLL1A6NHQ2 334 aaKnown RBP9.69□□□□□ -0.86
COL4A1-202ENST00000467182 B4DEV8 164 aa9.69□□□□□ -0.86
COL4A1-202ENST00000467182 F6UB75 175 aa9.69□□□□□ -0.86
COL4A1-202ENST00000467182 ZNF705DP0CH99 300 aaPredicted RBP9.69□□□□□ -0.86
COL4A1-202ENST00000467182 ZNF705BP0CI00 300 aaPredicted RBP9.69□□□□□ -0.86
COL4A1-202ENST00000467182 OR5I1Q13606 314 aa9.69□□□□□ -0.86
COL4A1-202ENST00000467182 C12orf54Q6X4T0 127 aa9.69□□□□□ -0.86
COL4A1-202ENST00000467182 TMEM183AQ8IXX5 376 aa9.69□□□□□ -0.86
COL4A1-202ENST00000467182 OR8A1Q8NGG7 326 aa9.69□□□□□ -0.86
COL4A1-202ENST00000467182 OR2K2Q8NGT1 345 aa9.69□□□□□ -0.86
COL4A1-202ENST00000467182 Q8TAT8 98 aa9.69□□□□□ -0.86
COL4A1-202ENST00000467182 GPR61Q9BZJ8 451 aa9.69□□□□□ -0.86
COL4A1-202ENST00000467182 PPP1R14DQ9NXH3 145 aa9.69□□□□□ -0.86
COL4A1-202ENST00000467182 ANK2Q01484 3957 aa9.69□□□□□ -0.86
COL4A1-202ENST00000467182 A0A087WWC5 75 aa9.68□□□□□ -0.86
COL4A1-202ENST00000467182 SNRPD3P62318 126 aaKnown RBP9.68□□□□□ -0.86
COL4A1-202ENST00000467182 RNF212Q495C1 297 aa9.68□□□□□ -0.86
COL4A1-202ENST00000467182 PSMG4Q5JS54 123 aa9.68□□□□□ -0.86
COL4A1-202ENST00000467182 GDF5OSQ5U4N7 250 aa9.68□□□□□ -0.86
COL4A1-202ENST00000467182 SHISA2Q6UWI4 295 aa9.68□□□□□ -0.86
COL4A1-202ENST00000467182 LINC00322Q6ZN03 302 aaPredicted RBP9.68□□□□□ -0.86
COL4A1-202ENST00000467182 WFDC9Q8NEX5 89 aa9.68□□□□□ -0.86
COL4A1-202ENST00000467182 ZC2HC1AQ96GY0 325 aa9.68□□□□□ -0.86
COL4A1-202ENST00000467182 FAM19A4Q96LR4 140 aa9.68□□□□□ -0.86
COL4A1-202ENST00000467182 C8orf49Q96NF6 230 aa9.68□□□□□ -0.86
COL4A1-202ENST00000467182 PRR25Q96S07 402 aa9.68□□□□□ -0.86
COL4A1-202ENST00000467182 RPS10P5Q9NQ39 176 aa9.68□□□□□ -0.86
COL4A1-202ENST00000467182 ZFP30Q9Y2G7 519 aa9.68□□□□□ -0.86
COL4A1-202ENST00000467182 TRRAPQ9Y4A5 3859 aa9.67□□□□□ -0.86
COL4A1-202ENST00000467182 OR4C46A6NHA9 309 aa9.67□□□□□ -0.86
COL4A1-202ENST00000467182 CT45A10P0DMU9 189 aa9.67□□□□□ -0.86
COL4A1-202ENST00000467182 CRIP1P50238 77 aa9.67□□□□□ -0.86
COL4A1-202ENST00000467182 ZNF138P52744 262 aa9.67□□□□□ -0.86
COL4A1-202ENST00000467182 C3orf56Q8N813 242 aa9.67□□□□□ -0.86
COL4A1-202ENST00000467182 MAP6D1Q9H9H5 199 aa9.67□□□□□ -0.86
COL4A1-202ENST00000467182 ZNF492Q9P255 531 aa9.67□□□□□ -0.86
COL4A1-202ENST00000467182 A0A0J9YX75 114 aa9.66□□□□□ -0.86
COL4A1-202ENST00000467182 C19orf71A6NCJ1 209 aa9.66□□□□□ -0.86
COL4A1-202ENST00000467182 MGST1P10620 155 aaKnown RBP9.66□□□□□ -0.86
COL4A1-202ENST00000467182 BEAN1Q3B7T3 259 aa9.66□□□□□ -0.86
COL4A1-202ENST00000467182 ODF3L2Q3SX64 289 aa9.66□□□□□ -0.86
COL4A1-202ENST00000467182 FAM231DQ6ZW35 169 aa9.66□□□□□ -0.86
COL4A1-202ENST00000467182 SFRP2Q96HF1 295 aa9.66□□□□□ -0.86
COL4A1-202ENST00000467182 LINC00477Q96M19 166 aa9.66□□□□□ -0.86
COL4A1-202ENST00000467182 RNASE7Q9H1E1 156 aaKnown RBP9.66□□□□□ -0.86
COL4A1-202ENST00000467182 SAV1Q9H4B6 383 aaPredicted RBP9.66□□□□□ -0.86
COL4A1-202ENST00000467182 A8MTW9 85 aa9.65□□□□□ -0.86
COL4A1-202ENST00000467182 ZNF80P51504 273 aaPredicted RBP9.65□□□□□ -0.86
COL4A1-202ENST00000467182 DEFB131AP59861 70 aa9.65□□□□□ -0.86
COL4A1-202ENST00000467182 HIST1H1AQ02539 215 aaPredicted RBP9.65□□□□□ -0.86
COL4A1-202ENST00000467182 ZNF124Q15973 351 aa9.65□□□□□ -0.86
COL4A1-202ENST00000467182 SAPCD1Q5SSQ6 148 aa9.65□□□□□ -0.86
COL4A1-202ENST00000467182 TMEM78Q5T7P6 136 aa9.65□□□□□ -0.86
COL4A1-202ENST00000467182 C9orf66Q5T8R8 295 aa9.65□□□□□ -0.86
COL4A1-202ENST00000467182 FOXI2Q6ZQN5 318 aa9.65□□□□□ -0.86
COL4A1-202ENST00000467182 CBLN2Q8IUK8 224 aa9.65□□□□□ -0.86
COL4A1-202ENST00000467182 OR10J6PQ8NGY7 276 aa9.65□□□□□ -0.86
COL4A1-202ENST00000467182 ANAPC16Q96DE5 110 aa9.65□□□□□ -0.86
COL4A1-202ENST00000467182 YPEL4Q96NS1 127 aa9.65□□□□□ -0.86
COL4A1-202ENST00000467182 OSTCQ9NRP0 149 aa9.65□□□□□ -0.86
COL4A1-202ENST00000467182 VWFP04275 2813 aa9.64□□□□□ -0.87
COL4A1-202ENST00000467182 MT-ND4LP03901 98 aa9.64□□□□□ -0.87
COL4A1-202ENST00000467182 CD33P20138 364 aa9.64□□□□□ -0.87
COL4A1-202ENST00000467182 INSL3P51460 131 aa9.64□□□□□ -0.87
COL4A1-202ENST00000467182 TMEM88Q6PEY1 159 aa9.64□□□□□ -0.87
COL4A1-202ENST00000467182 LURAP1LQ8IV03 231 aa9.64□□□□□ -0.87
COL4A1-202ENST00000467182 APRG1Q8IVJ8 170 aa9.64□□□□□ -0.87
COL4A1-202ENST00000467182 NUDT10Q8NFP7 164 aa9.64□□□□□ -0.87
COL4A1-202ENST00000467182 OR10G8Q8NGN5 311 aa9.64□□□□□ -0.87
COL4A1-202ENST00000467182 NUDT11Q96G61 164 aa9.64□□□□□ -0.87
COL4A1-202ENST00000467182 CTDSP1Q9GZU7 261 aa9.64□□□□□ -0.87
COL4A1-202ENST00000467182 C19orf73Q9NVV2 129 aa9.64□□□□□ -0.87
COL4A1-202ENST00000467182 TMEM242Q9NWH2 141 aa9.64□□□□□ -0.87
COL4A1-202ENST00000467182 LENEPQ9Y5L5 61 aa9.64□□□□□ -0.87
COL4A1-202ENST00000467182 V9GYV3 84 aa9.64□□□□□ -0.87
COL4A1-202ENST00000467182 TRBV7-9A0A0J9YWB2 115 aa9.63□□□□□ -0.87
COL4A1-202ENST00000467182 KNCNA6PVL3 124 aa9.63□□□□□ -0.87
COL4A1-202ENST00000467182 WIPF1O43516 503 aa9.63□□□□□ -0.87
COL4A1-202ENST00000467182 CRISP2P16562 243 aa9.63□□□□□ -0.87
COL4A1-202ENST00000467182 BTN1A1Q13410 526 aa9.63□□□□□ -0.87
COL4A1-202ENST00000467182 IBA57Q5T440 356 aaKnown RBP9.63□□□□□ -0.87
COL4A1-202ENST00000467182 PRR9Q5T870 116 aa9.63□□□□□ -0.87
COL4A1-202ENST00000467182 PRR27Q6MZM9 219 aa9.63□□□□□ -0.87
COL4A1-202ENST00000467182 AMTNQ6UX39 209 aa9.63□□□□□ -0.87
COL4A1-202ENST00000467182 ZFAND2AQ8N6M9 145 aa9.63□□□□□ -0.87
COL4A1-202ENST00000467182 RBMY1BA6NDE4 496 aaKnown RBP9.62□□□□□ -0.87
COL4A1-202ENST00000467182 RBMY1EA6NEQ0 496 aaKnown RBP9.62□□□□□ -0.87
COL4A1-202ENST00000467182 H7BYZ3 331 aa9.62□□□□□ -0.87
COL4A1-202ENST00000467182 PPP1R2P9O14990 202 aa9.62□□□□□ -0.87
COL4A1-202ENST00000467182 RBMY1DP0C7P1 496 aaKnown RBP9.62□□□□□ -0.87
COL4A1-202ENST00000467182 HLA-DRB4P13762 266 aa9.62□□□□□ -0.87
COL4A1-202ENST00000467182 IGLL1P15814 213 aa9.62□□□□□ -0.87
COL4A1-202ENST00000467182 ERVFC1-1P60608 527 aa9.62□□□□□ -0.87
COL4A1-202ENST00000467182 SMUG1Q53HV7 270 aa9.62□□□□□ -0.87
COL4A1-202ENST00000467182 EBLN2Q6P2I7 272 aa9.62□□□□□ -0.87
COL4A1-202ENST00000467182 ODF3Q96PU9 254 aa9.62□□□□□ -0.87
COL4A1-202ENST00000467182 MDFIQ99750 246 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms