RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 GPR82Q96P67 336 aa6.34□□□□□ -1.39
DDR1-242ENST00000465966 NKX6-2Q9C056 277 aaPredicted RBP6.34□□□□□ -1.39
DDR1-242ENST00000465966 UFC1Q9Y3C8 167 aa6.34□□□□□ -1.39
DDR1-242ENST00000465966 TRAV25A0A0B4J276 109 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 KIR2DL5BA0A0G2JN68 375 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 KIR2DL5BA0A0G2JPC4 375 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 PGPA6NDG6 321 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 PGPEP1LA6NFU8 196 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 M0R3E3 92 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 CHEK1O14757 476 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 ZNF253O75346 499 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 SNAPINO95295 136 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 PRB4P10163 310 aaPredicted RBP6.33□□□□□ -1.4
DDR1-242ENST00000465966 HLA-DMBP28068 263 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 RPL35P42766 123 aaKnown RBP6.33□□□□□ -1.4
DDR1-242ENST00000465966 IGFL4Q6B9Z1 124 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 KIR2DL5AQ8N109 375 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 KIR2DL5BQ8NHK3 375 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 RNF183Q96D59 192 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 TVP23CQ96ET8 276 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 GRAMD2BQ96HH9 432 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 IGF2BP2-AS1Q96M15 143 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 TCEAL7Q9BRU2 100 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 NIPSNAP3BQ9BS92 247 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 RHPN1-AS1Q9BWJ2 59 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 SDF2L1Q9HCN8 221 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 ZNF331Q9NQX6 463 aaPredicted RBP6.33□□□□□ -1.4
DDR1-242ENST00000465966 NAT8Q9UHE5 227 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 SMPXQ9UHP9 88 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 RPH3ALQ9UNE2 315 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 SELENOKQ9Y6D0 94 aa6.33□□□□□ -1.4
DDR1-242ENST00000465966 TRAV8-2A0A0B4J237 113 aa6.32□□□□□ -1.4
DDR1-242ENST00000465966 A0A1W2PS18 150 aa6.32□□□□□ -1.4
DDR1-242ENST00000465966 C9JCJ5 164 aa6.32□□□□□ -1.4
DDR1-242ENST00000465966 M0R036 132 aa6.32□□□□□ -1.4
DDR1-242ENST00000465966 TCRAP04437 139 aa6.32□□□□□ -1.4
DDR1-242ENST00000465966 MED14OSP0DP75 135 aa6.32□□□□□ -1.4
DDR1-242ENST00000465966 TCTAP57738 103 aa6.32□□□□□ -1.4
DDR1-242ENST00000465966 RPL23P62829 140 aaKnown RBP6.32□□□□□ -1.4
DDR1-242ENST00000465966 FAM74A3Q4VXF1 159 aa6.32□□□□□ -1.4
DDR1-242ENST00000465966 CENPWQ5EE01 88 aa6.32□□□□□ -1.4
DDR1-242ENST00000465966 LINC00336Q6ZUF6 198 aa6.32□□□□□ -1.4
DDR1-242ENST00000465966 LYPD1Q8N2G4 141 aa6.32□□□□□ -1.4
DDR1-242ENST00000465966 HIST1H2BAQ96A08 127 aa6.32□□□□□ -1.4
DDR1-242ENST00000465966 LINC00479Q96M42 142 aa6.32□□□□□ -1.4
DDR1-242ENST00000465966 ATG101Q9BSB4 218 aa6.32□□□□□ -1.4
DDR1-242ENST00000465966 MLXQ9UH92 298 aa6.32□□□□□ -1.4
DDR1-242ENST00000465966 EPDR1Q9UM22 224 aa6.32□□□□□ -1.4
DDR1-242ENST00000465966 TRAV34A0A0B4J273 112 aa6.31□□□□□ -1.4
DDR1-242ENST00000465966 ISLRO14498 428 aa6.31□□□□□ -1.4
DDR1-242ENST00000465966 SOCS3O14543 225 aa6.31□□□□□ -1.4
DDR1-242ENST00000465966 CNN1P51911 297 aaKnown RBP6.31□□□□□ -1.4
DDR1-242ENST00000465966 PSG9Q00887 426 aa6.31□□□□□ -1.4
DDR1-242ENST00000465966 PNRC1Q12796 327 aaPredicted RBP6.31□□□□□ -1.4
DDR1-242ENST00000465966 RHEBQ15382 184 aa6.31□□□□□ -1.4
DDR1-242ENST00000465966 ADIRFQ15847 76 aa6.31□□□□□ -1.4
DDR1-242ENST00000465966 TMEM241Q24JQ0 296 aa6.31□□□□□ -1.4
DDR1-242ENST00000465966 GOLT1AQ6ZVE7 132 aa6.31□□□□□ -1.4
DDR1-242ENST00000465966 TCF24Q7RTU0 167 aa6.31□□□□□ -1.4
DDR1-242ENST00000465966 Q86TA4 180 aa6.31□□□□□ -1.4
DDR1-242ENST00000465966 LINC01551Q86U37 167 aa6.31□□□□□ -1.4
DDR1-242ENST00000465966 RNF182Q8N6D2 247 aa6.31□□□□□ -1.4
DDR1-242ENST00000465966 C11orf45Q8TAV5 145 aa6.31□□□□□ -1.4
DDR1-242ENST00000465966 SPAG8Q99932 426 aaPredicted RBP6.31□□□□□ -1.4
DDR1-242ENST00000465966 SLC50A1Q9BRV3 221 aa6.31□□□□□ -1.4
DDR1-242ENST00000465966 AAMDCQ9H7C9 122 aa6.31□□□□□ -1.4
DDR1-242ENST00000465966 FRAS1Q86XX4 4008 aa6.3□□□□□ -1.4
DDR1-242ENST00000465966 IGKV2-40A0A087WW87 121 aaPredicted RBP6.3□□□□□ -1.4
DDR1-242ENST00000465966 TRAV8-1A0A0A6YYK1 113 aa6.3□□□□□ -1.4
DDR1-242ENST00000465966 C7orf77A4D0Y5 90 aa6.3□□□□□ -1.4
DDR1-242ENST00000465966 HELTA6NFD8 242 aa6.3□□□□□ -1.4
DDR1-242ENST00000465966 DIRC3C9JPN6 131 aa6.3□□□□□ -1.4
DDR1-242ENST00000465966 K7EN84 100 aa6.3□□□□□ -1.4
DDR1-242ENST00000465966 IGKV2D-40P01614 121 aaPredicted RBP6.3□□□□□ -1.4
DDR1-242ENST00000465966 IGLV2-11P01706 119 aa6.3□□□□□ -1.4
DDR1-242ENST00000465966 IGLV2-8P01709 118 aa6.3□□□□□ -1.4
DDR1-242ENST00000465966 GNG4P50150 75 aa6.3□□□□□ -1.4
DDR1-242ENST00000465966 MEOX2P50222 304 aa6.3□□□□□ -1.4
DDR1-242ENST00000465966 TMEM183BQ1AE95 376 aa6.3□□□□□ -1.4
DDR1-242ENST00000465966 CBLN2Q8IUK8 224 aa6.3□□□□□ -1.4
DDR1-242ENST00000465966 NHLRC2Q8NBF2 726 aa6.3□□□□□ -1.4
DDR1-242ENST00000465966 CMTM2Q8TAZ6 248 aa6.3□□□□□ -1.4
DDR1-242ENST00000465966 ISOC2Q96AB3 205 aa6.3□□□□□ -1.4
DDR1-242ENST00000465966 SGK494Q96LW2 274 aa6.3□□□□□ -1.4
DDR1-242ENST00000465966 NRN1Q9NPD7 142 aa6.3□□□□□ -1.4
DDR1-242ENST00000465966 KLF12Q9Y4X4 402 aa6.3□□□□□ -1.4
DDR1-242ENST00000465966 IGKV3-7A0A075B6H7 116 aa6.29□□□□□ -1.4
DDR1-242ENST00000465966 ZNF705FA8MVS1 300 aaPredicted RBP6.29□□□□□ -1.4
DDR1-242ENST00000465966 PRAC2D3DTV9 90 aa6.29□□□□□ -1.4
DDR1-242ENST00000465966 DNASE2O00115 360 aaPredicted RBP6.29□□□□□ -1.4
DDR1-242ENST00000465966 RPL35AP18077 110 aaKnown RBP6.29□□□□□ -1.4
DDR1-242ENST00000465966 TAS2R60P59551 318 aa6.29□□□□□ -1.4
DDR1-242ENST00000465966 UBE2G1P62253 170 aa6.29□□□□□ -1.4
DDR1-242ENST00000465966 TMEM88Q6PEY1 159 aa6.29□□□□□ -1.4
DDR1-242ENST00000465966 TMEM75Q8N9X5 138 aa6.29□□□□□ -1.4
DDR1-242ENST00000465966 OCC1Q8TAD7 63 aa6.29□□□□□ -1.4
DDR1-242ENST00000465966 FMC1Q96HJ9 113 aa6.29□□□□□ -1.4
DDR1-242ENST00000465966 C16orf92Q96LL3 132 aa6.29□□□□□ -1.4
DDR1-242ENST00000465966 C20orf173Q96LM9 149 aa6.29□□□□□ -1.4
DDR1-242ENST00000465966 RPS10P5Q9NQ39 176 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms