RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 PSG8Q9UQ74 426 aa5.53□□□□□ -1.52
EPHA4-210ENST00000463446 HLA-DRB4X5D2U9 266 aa5.53□□□□□ -1.52
EPHA4-210ENST00000463446 LOC102724200A0A096LPH7 203 aaPredicted RBP5.52□□□□□ -1.53
EPHA4-210ENST00000463446 TRAV8-2A0A0B4J237 113 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 GGTLC3B5MD39 225 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 H3BMM0 161 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 SLC17A3O00476 420 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 LTAP01374 205 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 RPL35P42766 123 aaKnown RBP5.52□□□□□ -1.53
EPHA4-210ENST00000463446 CDKN1BP46527 198 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 ATP5G3P48201 142 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 CEBPGP53567 150 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 ACTL10Q5JWF8 245 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 COX8CQ7Z4L0 72 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 PRNTQ86SH4 94 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 SVBPQ8N300 66 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 RNF182Q8N6D2 247 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 C2CD4CQ8TF44 421 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 TVP23CQ96ET8 276 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 BTF3L4Q96K17 158 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 KCNS1Q96KK3 526 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 CITED4Q96RK1 184 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 AGPAT4-IT1Q9H0P7 198 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 CSTL1Q9H114 145 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 MAP6D1Q9H9H5 199 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 RPH3ALQ9UNE2 315 aa5.52□□□□□ -1.53
EPHA4-210ENST00000463446 TRAV21A0A0B4J279 112 aa5.51□□□□□ -1.53
EPHA4-210ENST00000463446 IZUMO1RA6ND01 250 aa5.51□□□□□ -1.53
EPHA4-210ENST00000463446 SMIM9A6NGZ8 99 aa5.51□□□□□ -1.53
EPHA4-210ENST00000463446 ZNF705FA8MVS1 300 aaPredicted RBP5.51□□□□□ -1.53
EPHA4-210ENST00000463446 H3BTX0 84 aa5.51□□□□□ -1.53
EPHA4-210ENST00000463446 M0R3E3 92 aa5.51□□□□□ -1.53
EPHA4-210ENST00000463446 SNAPINO95295 136 aa5.51□□□□□ -1.53
EPHA4-210ENST00000463446 MT-ND4LP03901 98 aa5.51□□□□□ -1.53
EPHA4-210ENST00000463446 SNRPCP09234 159 aaKnown RBP5.51□□□□□ -1.53
EPHA4-210ENST00000463446 SFTA3P0C7M3 94 aa5.51□□□□□ -1.53
EPHA4-210ENST00000463446 CRISP2P16562 243 aa5.51□□□□□ -1.53
EPHA4-210ENST00000463446 SMCPP49901 116 aaPredicted RBP5.51□□□□□ -1.53
EPHA4-210ENST00000463446 RPS20P60866 119 aaKnown RBP5.51□□□□□ -1.53
EPHA4-210ENST00000463446 ZNF674Q2M3X9 581 aa5.51□□□□□ -1.53
EPHA4-210ENST00000463446 OXLD1Q5BKU9 147 aa5.51□□□□□ -1.53
EPHA4-210ENST00000463446 FAM162BQ5T6X4 162 aa5.51□□□□□ -1.53
EPHA4-210ENST00000463446 SAMD5Q5TGI4 173 aa5.51□□□□□ -1.53
EPHA4-210ENST00000463446 ANAPC16Q96DE5 110 aa5.51□□□□□ -1.53
EPHA4-210ENST00000463446 PRR25Q96S07 402 aa5.51□□□□□ -1.53
EPHA4-210ENST00000463446 PARLQ9H300 379 aa5.51□□□□□ -1.53
EPHA4-210ENST00000463446 SCO2A0A1W2PP80 73 aa5.5□□□□□ -1.53
EPHA4-210ENST00000463446 PFN1P07737 140 aaKnown RBP5.5□□□□□ -1.53
EPHA4-210ENST00000463446 KPRPQ5T749 579 aaPredicted RBP5.5□□□□□ -1.53
EPHA4-210ENST00000463446 HIST2H2BDQ6DRA6 164 aa5.5□□□□□ -1.53
EPHA4-210ENST00000463446 FAM159AQ6UWV7 190 aa5.5□□□□□ -1.53
EPHA4-210ENST00000463446 PCNPQ8WW12 178 aaKnown RBP5.5□□□□□ -1.53
EPHA4-210ENST00000463446 CTDSP1Q9GZU7 261 aa5.5□□□□□ -1.53
EPHA4-210ENST00000463446 SDF2L1Q9HCN8 221 aa5.5□□□□□ -1.53
EPHA4-210ENST00000463446 TMEM242Q9NWH2 141 aa5.5□□□□□ -1.53
EPHA4-210ENST00000463446 GOLT1BQ9Y3E0 138 aa5.5□□□□□ -1.53
EPHA4-210ENST00000463446 ZFHX3Q15911 3703 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 FAM231BA6NCW3 169 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 A8MTW9 85 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 A8MWL6 223 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 H7BYZ3 331 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 EIF3GO75821 320 aaKnown RBP eCLIP5.49□□□□□ -1.53
EPHA4-210ENST00000463446 P01737 135 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 CD7P09564 240 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 MGST1P10620 155 aaKnown RBP5.49□□□□□ -1.53
EPHA4-210ENST00000463446 EDN2P20800 178 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 ERVFC1-1P60608 527 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 ODF3L2Q3SX64 289 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 Q6AWC8 147 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 IGFL4Q6B9Z1 124 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 ZNF493Q6ZR52 646 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 FAM231DQ6ZW35 169 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 Q6ZWC4 215 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 TRPT1Q86TN4 253 aaKnown RBP5.49□□□□□ -1.53
EPHA4-210ENST00000463446 APRG1Q8IVJ8 170 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 OCC1Q8TAD7 63 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 C20orf173Q96LM9 149 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 VGLL1Q99990 258 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 PYGO2Q9BRQ0 406 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 TMEM208Q9BTX3 173 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 SRD5A3Q9H8P0 318 aa5.49□□□□□ -1.53
EPHA4-210ENST00000463446 SETD2Q9BYW2 2564 aaPredicted RBP5.49□□□□□ -1.53
EPHA4-210ENST00000463446 ANK3Q12955 4377 aaKnown RBP5.48□□□□□ -1.53
EPHA4-210ENST00000463446 IGKV2-40A0A087WW87 121 aaPredicted RBP5.48□□□□□ -1.53
EPHA4-210ENST00000463446 C7orf71A4D174 169 aa5.48□□□□□ -1.53
EPHA4-210ENST00000463446 CXorf65A6NEN9 183 aa5.48□□□□□ -1.53
EPHA4-210ENST00000463446 KLLNB2CW77 178 aa5.48□□□□□ -1.53
EPHA4-210ENST00000463446 F2Z2F3 143 aa5.48□□□□□ -1.53
EPHA4-210ENST00000463446 GCGP01275 180 aa5.48□□□□□ -1.53
EPHA4-210ENST00000463446 INSP01308 110 aa5.48□□□□□ -1.53
EPHA4-210ENST00000463446 IGKV2D-40P01614 121 aaPredicted RBP5.48□□□□□ -1.53
EPHA4-210ENST00000463446 IGLV2-11P01706 119 aa5.48□□□□□ -1.53
EPHA4-210ENST00000463446 S100PP25815 95 aa5.48□□□□□ -1.53
EPHA4-210ENST00000463446 RNASE4P34096 147 aaKnown RBP5.48□□□□□ -1.53
EPHA4-210ENST00000463446 GNG5P63218 68 aa5.48□□□□□ -1.53
EPHA4-210ENST00000463446 RHEBQ15382 184 aa5.48□□□□□ -1.53
EPHA4-210ENST00000463446 CENPWQ5EE01 88 aa5.48□□□□□ -1.53
EPHA4-210ENST00000463446 DEFB121Q5J5C9 76 aa5.48□□□□□ -1.53
EPHA4-210ENST00000463446 C10orf91Q5T1B1 145 aa5.48□□□□□ -1.53
EPHA4-210ENST00000463446 IBA57Q5T440 356 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms