RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ATP5G1P05496 136 aa13.86□□□□□ -0.19
VARS-221ENST00000463184 AZU1P20160 251 aa13.86□□□□□ -0.19
VARS-221ENST00000463184 ATP5G3P48201 142 aa13.86□□□□□ -0.19
VARS-221ENST00000463184 SERF2P84101 59 aa13.86□□□□□ -0.19
VARS-221ENST00000463184 BAP18Q8IXM2 172 aa13.86□□□□□ -0.19
VARS-221ENST00000463184 TMEM256Q8N2U0 113 aa13.86□□□□□ -0.19
VARS-221ENST00000463184 RNF182Q8N6D2 247 aa13.86□□□□□ -0.19
VARS-221ENST00000463184 FUT9Q9Y231 359 aa13.86□□□□□ -0.19
VARS-221ENST00000463184 BOLA2-SMG1P6H3BVE0 249 aa13.85□□□□□ -0.19
VARS-221ENST00000463184 M6PRP20645 277 aa13.85□□□□□ -0.19
VARS-221ENST00000463184 RHOBP62745 196 aa13.85□□□□□ -0.19
VARS-221ENST00000463184 MIR17HGQ75NE6 70 aa13.85□□□□□ -0.19
VARS-221ENST00000463184 ZNF738Q8NE65 137 aa13.85□□□□□ -0.19
VARS-221ENST00000463184 HYLS1Q96M11 299 aa13.85□□□□□ -0.19
VARS-221ENST00000463184 LINC01587Q99440 93 aa13.85□□□□□ -0.19
VARS-221ENST00000463184 TMEM14CQ9P0S9 112 aa13.85□□□□□ -0.19
VARS-221ENST00000463184 TRAV12-2A0A075B6T6 113 aa13.84□□□□□ -0.19
VARS-221ENST00000463184 KANTRA0A1W2PQU2 76 aa13.84□□□□□ -0.19
VARS-221ENST00000463184 BCL2L11O43521 198 aa13.84□□□□□ -0.19
VARS-221ENST00000463184 MBP02144 154 aa13.84□□□□□ -0.19
VARS-221ENST00000463184 TAS2R60P59551 318 aa13.84□□□□□ -0.19
VARS-221ENST00000463184 TMUB2Q71RG4 321 aa13.84□□□□□ -0.19
VARS-221ENST00000463184 MAPKAPK5-AS1Q8N8E1 139 aa13.84□□□□□ -0.19
VARS-221ENST00000463184 LINC00588Q9Y4M8 146 aa13.84□□□□□ -0.19
VARS-221ENST00000463184 IGLC2P0DOY2 106 aa13.83□□□□□ -0.2
VARS-221ENST00000463184 LCN15Q6UWW0 184 aa13.83□□□□□ -0.2
VARS-221ENST00000463184 OR10G4Q8NGN3 311 aa13.83□□□□□ -0.2
VARS-221ENST00000463184 OR10G9Q8NGN4 311 aa13.83□□□□□ -0.2
VARS-221ENST00000463184 OR10G7Q8NGN6 311 aa13.83□□□□□ -0.2
VARS-221ENST00000463184 LRRC20Q8TCA0 184 aa13.83□□□□□ -0.2
VARS-221ENST00000463184 C16orf74Q96GX8 76 aa13.83□□□□□ -0.2
VARS-221ENST00000463184 FAM167A-AS1Q96KT0 104 aa13.83□□□□□ -0.2
VARS-221ENST00000463184 SLC25A2Q9BXI2 301 aa13.83□□□□□ -0.2
VARS-221ENST00000463184 SH3BGRL3Q9H299 93 aa13.83□□□□□ -0.2
VARS-221ENST00000463184 PPP1R14DQ9NXH3 145 aa13.83□□□□□ -0.2
VARS-221ENST00000463184 LRP1BQ9NZR2 4599 aa13.82□□□□□ -0.2
VARS-221ENST00000463184 PFDN1O60925 122 aa13.82□□□□□ -0.2
VARS-221ENST00000463184 RAB2AP61019 212 aa13.82□□□□□ -0.2
VARS-221ENST00000463184 HIST1H1AQ02539 215 aaPredicted RBP13.82□□□□□ -0.2
VARS-221ENST00000463184 CD300CQ08708 224 aa13.82□□□□□ -0.2
VARS-221ENST00000463184 GUK1Q16774 197 aa13.82□□□□□ -0.2
VARS-221ENST00000463184 OR8A1Q8NGG7 326 aa13.82□□□□□ -0.2
VARS-221ENST00000463184 TIMM8BQ9Y5J9 83 aaPredicted RBP13.82□□□□□ -0.2
VARS-221ENST00000463184 A0A1W2PPV4 95 aa13.81□□□□□ -0.2
VARS-221ENST00000463184 H3BQ15 152 aa13.81□□□□□ -0.2
VARS-221ENST00000463184 HIST1H1EP10412 219 aaKnown RBP13.81□□□□□ -0.2
VARS-221ENST00000463184 TAS2R45P59539 299 aa13.81□□□□□ -0.2
VARS-221ENST00000463184 EIF5AP63241 154 aaKnown RBP13.81□□□□□ -0.2
VARS-221ENST00000463184 LGALSLQ3ZCW2 172 aaPredicted RBP13.81□□□□□ -0.2
VARS-221ENST00000463184 ZNF493Q6ZR52 646 aa13.81□□□□□ -0.2
VARS-221ENST00000463184 RNF141Q8WVD5 230 aa13.81□□□□□ -0.2
VARS-221ENST00000463184 SLC50A1Q9BRV3 221 aa13.81□□□□□ -0.2
VARS-221ENST00000463184 ZNF471Q9BX82 626 aaPredicted RBP13.81□□□□□ -0.2
VARS-221ENST00000463184 OR51M1Q9H341 326 aa13.81□□□□□ -0.2
VARS-221ENST00000463184 SNRPCP09234 159 aaKnown RBP13.8□□□□□ -0.2
VARS-221ENST00000463184 HTN1P15515 57 aa13.8□□□□□ -0.2
VARS-221ENST00000463184 PSG3Q16557 428 aa13.8□□□□□ -0.2
VARS-221ENST00000463184 ZFP69Q49AA0 526 aa13.8□□□□□ -0.2
VARS-221ENST00000463184 KHDC3LQ587J8 217 aa13.8□□□□□ -0.2
VARS-221ENST00000463184 FAM122CQ6P4D5 195 aa13.8□□□□□ -0.2
VARS-221ENST00000463184 SSX7Q7RTT5 188 aa13.8□□□□□ -0.2
VARS-221ENST00000463184 SAT2Q96F10 170 aaPredicted RBP13.8□□□□□ -0.2
VARS-221ENST00000463184 PAXXQ9BUH6 204 aa13.8□□□□□ -0.2
VARS-221ENST00000463184 Q9H8V8 135 aa13.8□□□□□ -0.2
VARS-221ENST00000463184 ZNF331Q9NQX6 463 aaPredicted RBP13.8□□□□□ -0.2
VARS-221ENST00000463184 ZNF586Q9NXT0 402 aa13.8□□□□□ -0.2
VARS-221ENST00000463184 ZNF253O75346 499 aa13.79□□□□□ -0.2
VARS-221ENST00000463184 PYYP10082 97 aa13.79□□□□□ -0.2
VARS-221ENST00000463184 TRBV19A0A075B6N1 114 aa13.78□□□□□ -0.2
VARS-221ENST00000463184 H3BTX0 84 aa13.78□□□□□ -0.2
VARS-221ENST00000463184 OR7C2O60412 319 aa13.78□□□□□ -0.2
VARS-221ENST00000463184 CDKN1BP46527 198 aa13.78□□□□□ -0.2
VARS-221ENST00000463184 CDC34P49427 236 aaPredicted RBP13.78□□□□□ -0.2
VARS-221ENST00000463184 PDE6HQ13956 83 aa13.78□□□□□ -0.2
VARS-221ENST00000463184 OR10J6PQ8NGY7 276 aa13.78□□□□□ -0.2
VARS-221ENST00000463184 NOP10Q9NPE3 64 aaKnown RBP13.78□□□□□ -0.2
VARS-221ENST00000463184 SLC17A3O00476 420 aa13.77□□□□□ -0.21
VARS-221ENST00000463184 NBEAP1P0C6P0 100 aa13.77□□□□□ -0.21
VARS-221ENST00000463184 AKR1C8PQ5T2L2 129 aa13.77□□□□□ -0.21
VARS-221ENST00000463184 PQLC2Q6ZP29 291 aa13.77□□□□□ -0.21
VARS-221ENST00000463184 Q8N1X5 172 aa13.77□□□□□ -0.21
VARS-221ENST00000463184 RNASE8Q8TDE3 154 aaKnown RBP13.77□□□□□ -0.21
VARS-221ENST00000463184 TMEM263Q8WUH6 116 aaKnown RBP13.77□□□□□ -0.21
VARS-221ENST00000463184 ZNF503Q96F45 646 aa13.77□□□□□ -0.21
VARS-221ENST00000463184 ACTR3CQ9C0K3 210 aaPredicted RBP13.77□□□□□ -0.21
VARS-221ENST00000463184 H7BYZ3 331 aa13.76□□□□□ -0.21
VARS-221ENST00000463184 SEC11BP0C7V7 166 aa13.76□□□□□ -0.21
VARS-221ENST00000463184 TPT1P13693 172 aaKnown RBP13.76□□□□□ -0.21
VARS-221ENST00000463184 TTC32Q5I0X7 151 aa13.76□□□□□ -0.21
VARS-221ENST00000463184 SPATA12Q7Z6I5 190 aa13.76□□□□□ -0.21
VARS-221ENST00000463184 BLNKQ8WV28 456 aa13.76□□□□□ -0.21
VARS-221ENST00000463184 RAB24Q969Q5 203 aa13.76□□□□□ -0.21
VARS-221ENST00000463184 RPUSD4Q96CM3 377 aaKnown RBP13.76□□□□□ -0.21
VARS-221ENST00000463184 FXYD5Q96DB9 178 aa13.76□□□□□ -0.21
VARS-221ENST00000463184 C20orf144Q9BQM9 153 aa13.76□□□□□ -0.21
VARS-221ENST00000463184 EIF3GO75821 320 aaKnown RBP eCLIP13.75□□□□□ -0.21
VARS-221ENST00000463184 OR10J4P0C629 311 aa13.75□□□□□ -0.21
VARS-221ENST00000463184 OR5I1Q13606 314 aa13.75□□□□□ -0.21
VARS-221ENST00000463184 C9orf62Q8N4C0 152 aa13.75□□□□□ -0.21
VARS-221ENST00000463184 STOML3Q8TAV4 291 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms