RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 EBLN2Q6P2I7 272 aa5.29□□□□□ -1.56
RTN4-212ENST00000461004 AKAP14Q86UN6 197 aa5.29□□□□□ -1.56
RTN4-212ENST00000461004 SLC50A1Q9BRV3 221 aa5.29□□□□□ -1.56
RTN4-212ENST00000461004 TMPRSS5Q9H3S3 457 aa5.29□□□□□ -1.56
RTN4-212ENST00000461004 IGKV2-40A0A087WW87 121 aaPredicted RBP5.28□□□□□ -1.56
RTN4-212ENST00000461004 A0A0D9SG52 128 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 A0A0J9YWU9 116 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 A0A1W2PPV4 95 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 M0R2Z0 102 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 CRXO43186 299 aaPredicted RBP5.28□□□□□ -1.56
RTN4-212ENST00000461004 BCL2L11O43521 198 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 IGKV2D-40P01614 121 aaPredicted RBP5.28□□□□□ -1.56
RTN4-212ENST00000461004 C1QBP02746 253 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 STAG3L2P0CL84 134 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 STAG3L3P0CL85 134 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 RBMY1A1P0DJD3 496 aaKnown RBP5.28□□□□□ -1.56
RTN4-212ENST00000461004 RBMY1CP0DJD4 496 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 ARL14EPLP0DKL9 152 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 CDC34P49427 236 aaPredicted RBP5.28□□□□□ -1.56
RTN4-212ENST00000461004 FHITP49789 147 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 NKX2-5P52952 324 aaPredicted RBP5.28□□□□□ -1.56
RTN4-212ENST00000461004 FGF8P55075 233 aaPredicted RBP5.28□□□□□ -1.56
RTN4-212ENST00000461004 RANP62826 216 aaKnown RBP5.28□□□□□ -1.56
RTN4-212ENST00000461004 UBE2L3P68036 154 aaKnown RBP5.28□□□□□ -1.56
RTN4-212ENST00000461004 SERF2P84101 59 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 PSG9Q00887 426 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 FOXI1Q12951 378 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 RBMY1FQ15415 496 aaKnown RBP5.28□□□□□ -1.56
RTN4-212ENST00000461004 GUK1Q16774 197 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 SPINK13Q1W4C9 94 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 TMEM41BQ5BJD5 291 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 SAMD13Q5VXD3 122 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 MORN3Q6PF18 240 aaPredicted RBP5.28□□□□□ -1.56
RTN4-212ENST00000461004 C1orf158Q8N1D5 194 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 OR11H2Q8NH07 326 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 LINC00476Q8WZB0 136 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 GNPNAT1Q96EK6 184 aaPredicted RBP5.28□□□□□ -1.56
RTN4-212ENST00000461004 RARRES2Q99969 163 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 ZNF471Q9BX82 626 aaPredicted RBP5.28□□□□□ -1.56
RTN4-212ENST00000461004 RNF24Q9Y225 148 aa5.28□□□□□ -1.56
RTN4-212ENST00000461004 DYNC2H1Q8NCM8 4307 aaKnown RBP5.28□□□□□ -1.56
RTN4-212ENST00000461004 TRAV12-2A0A075B6T6 113 aa5.27□□□□□ -1.57
RTN4-212ENST00000461004 IGHV3OR16-12A0A075B7B8 117 aa5.27□□□□□ -1.57
RTN4-212ENST00000461004 KANTRA0A1W2PQU2 76 aa5.27□□□□□ -1.57
RTN4-212ENST00000461004 ZNF253O75346 499 aa5.27□□□□□ -1.57
RTN4-212ENST00000461004 CT45A10P0DMU9 189 aa5.27□□□□□ -1.57
RTN4-212ENST00000461004 TAS2R45P59539 299 aa5.27□□□□□ -1.57
RTN4-212ENST00000461004 PMS2P11Q13670 270 aa5.27□□□□□ -1.57
RTN4-212ENST00000461004 KHDC3LQ587J8 217 aa5.27□□□□□ -1.57
RTN4-212ENST00000461004 BAP18Q8IXM2 172 aa5.27□□□□□ -1.57
RTN4-212ENST00000461004 C9orf62Q8N4C0 152 aa5.27□□□□□ -1.57
RTN4-212ENST00000461004 HYLS1Q96M11 299 aa5.27□□□□□ -1.57
RTN4-212ENST00000461004 VGLL1Q99990 258 aa5.27□□□□□ -1.57
RTN4-212ENST00000461004 ACTR3CQ9C0K3 210 aaPredicted RBP5.27□□□□□ -1.57
RTN4-212ENST00000461004 AGPAT4-IT1Q9H0P7 198 aa5.27□□□□□ -1.57
RTN4-212ENST00000461004 Q9H3A6 140 aa5.27□□□□□ -1.57
RTN4-212ENST00000461004 STARD9Q9P2P6 4700 aa5.27□□□□□ -1.57
RTN4-212ENST00000461004 TP53TG1Q9Y2A0 90 aa5.27□□□□□ -1.57
RTN4-212ENST00000461004 IGHV4-28A0A0C4DH34 117 aa5.26□□□□□ -1.57
RTN4-212ENST00000461004 PGPA6NDG6 321 aa5.26□□□□□ -1.57
RTN4-212ENST00000461004 ZNF705EA8MWA4 302 aaPredicted RBP5.26□□□□□ -1.57
RTN4-212ENST00000461004 J3KRW8 73 aa5.26□□□□□ -1.57
RTN4-212ENST00000461004 TRIAP1O43715 76 aa5.26□□□□□ -1.57
RTN4-212ENST00000461004 PFDN1O60925 122 aa5.26□□□□□ -1.57
RTN4-212ENST00000461004 DUSP14O95147 198 aaKnown RBP5.26□□□□□ -1.57
RTN4-212ENST00000461004 MBP02144 154 aa5.26□□□□□ -1.57
RTN4-212ENST00000461004 BTF3P20290 206 aaKnown RBP5.26□□□□□ -1.57
RTN4-212ENST00000461004 GCHFRP30047 84 aa5.26□□□□□ -1.57
RTN4-212ENST00000461004 GNG5P63218 68 aa5.26□□□□□ -1.57
RTN4-212ENST00000461004 PDE6HQ13956 83 aa5.26□□□□□ -1.57
RTN4-212ENST00000461004 AKR1C8PQ5T2L2 129 aa5.26□□□□□ -1.57
RTN4-212ENST00000461004 ZFAND6Q6FIF0 208 aa5.26□□□□□ -1.57
RTN4-212ENST00000461004 PQLC2Q6ZP29 291 aa5.26□□□□□ -1.57
RTN4-212ENST00000461004 Q6ZQT7 251 aa5.26□□□□□ -1.57
RTN4-212ENST00000461004 Q8NAQ8 132 aa5.26□□□□□ -1.57
RTN4-212ENST00000461004 SUN5Q8TC36 379 aa5.26□□□□□ -1.57
RTN4-212ENST00000461004 TMED6Q8WW62 240 aa5.26□□□□□ -1.57
RTN4-212ENST00000461004 CTXND1A0A1B0GTU2 59 aa5.25□□□□□ -1.57
RTN4-212ENST00000461004 LOC102723971A0A1B0GUV8 181 aa5.25□□□□□ -1.57
RTN4-212ENST00000461004 A0A1B0GV50 99 aa5.25□□□□□ -1.57
RTN4-212ENST00000461004 ZNF705GA8MUZ8 300 aaPredicted RBP5.25□□□□□ -1.57
RTN4-212ENST00000461004 BOLA2-SMG1P6H3BVE0 249 aa5.25□□□□□ -1.57
RTN4-212ENST00000461004 SEC11BP0C7V7 166 aa5.25□□□□□ -1.57
RTN4-212ENST00000461004 NUTF2P61970 127 aaKnown RBP5.25□□□□□ -1.57
RTN4-212ENST00000461004 ZFP69Q49AA0 526 aa5.25□□□□□ -1.57
RTN4-212ENST00000461004 LCE5AQ5TCM9 118 aa5.25□□□□□ -1.57
RTN4-212ENST00000461004 ZNF705AQ6ZN79 300 aaPredicted RBP5.25□□□□□ -1.57
RTN4-212ENST00000461004 IQCF2Q8IXL9 164 aa5.25□□□□□ -1.57
RTN4-212ENST00000461004 OR10J6PQ8NGY7 276 aa5.25□□□□□ -1.57
RTN4-212ENST00000461004 Q8TAT8 98 aa5.25□□□□□ -1.57
RTN4-212ENST00000461004 FAM213BQ8TBF2 198 aa5.25□□□□□ -1.57
RTN4-212ENST00000461004 MRPL53Q96EL3 112 aaKnown RBP5.25□□□□□ -1.57
RTN4-212ENST00000461004 SGK494Q96LW2 274 aa5.25□□□□□ -1.57
RTN4-212ENST00000461004 IGF2BP2-AS1Q96M15 143 aa5.25□□□□□ -1.57
RTN4-212ENST00000461004 AAMDCQ9H7C9 122 aa5.25□□□□□ -1.57
RTN4-212ENST00000461004 RPH3ALQ9UNE2 315 aa5.25□□□□□ -1.57
RTN4-212ENST00000461004 PRELID1Q9Y255 219 aa5.25□□□□□ -1.57
RTN4-212ENST00000461004 YTHDF2Q9Y5A9 579 aaKnown RBP5.25□□□□□ -1.57
RTN4-212ENST00000461004 PLECQ15149 4684 aaKnown RBP5.25□□□□□ -1.57
RTN4-212ENST00000461004 GGTLC3B5MD39 225 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms