RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 AGPAT4-IT1Q9H0P7 198 aa12.26□□□□□ -0.45
CCDC90B-202ENST00000455220 FBLL1A6NHQ2 334 aaKnown RBP12.25□□□□□ -0.45
CCDC90B-202ENST00000455220 AKR1C3P42330 323 aa12.25□□□□□ -0.45
CCDC90B-202ENST00000455220 ERCC8Q13216 396 aa12.25□□□□□ -0.45
CCDC90B-202ENST00000455220 UQCC3Q6UW78 93 aa12.25□□□□□ -0.45
CCDC90B-202ENST00000455220 LINC00479Q96M42 142 aa12.25□□□□□ -0.45
CCDC90B-202ENST00000455220 PPP1R14DQ9NXH3 145 aa12.25□□□□□ -0.45
CCDC90B-202ENST00000455220 TRAV8-1A0A0A6YYK1 113 aa12.24□□□□□ -0.45
CCDC90B-202ENST00000455220 TRBV6-1A0A0K0K1D8 114 aa12.24□□□□□ -0.45
CCDC90B-202ENST00000455220 TMEM183BQ1AE95 376 aa12.24□□□□□ -0.45
CCDC90B-202ENST00000455220 TRPT1Q86TN4 253 aaKnown RBP12.24□□□□□ -0.45
CCDC90B-202ENST00000455220 FMC1Q96HJ9 113 aa12.24□□□□□ -0.45
CCDC90B-202ENST00000455220 LINC00477Q96M19 166 aa12.24□□□□□ -0.45
CCDC90B-202ENST00000455220 TRAV34A0A0B4J273 112 aa12.23□□□□□ -0.45
CCDC90B-202ENST00000455220 S100A9P06702 114 aaKnown RBP12.23□□□□□ -0.45
CCDC90B-202ENST00000455220 TMEM78Q5T7P6 136 aa12.23□□□□□ -0.45
CCDC90B-202ENST00000455220 AMTNQ6UX39 209 aa12.23□□□□□ -0.45
CCDC90B-202ENST00000455220 STHQ8IWL8 128 aa12.23□□□□□ -0.45
CCDC90B-202ENST00000455220 ODF3Q96PU9 254 aa12.23□□□□□ -0.45
CCDC90B-202ENST00000455220 DERL1Q9BUN8 251 aa12.23□□□□□ -0.45
CCDC90B-202ENST00000455220 SLC35B3Q9H1N7 401 aa12.23□□□□□ -0.45
CCDC90B-202ENST00000455220 SRD5A3Q9H8P0 318 aa12.23□□□□□ -0.45
CCDC90B-202ENST00000455220 ZNF492Q9P255 531 aa12.23□□□□□ -0.45
CCDC90B-202ENST00000455220 RBMY1BA6NDE4 496 aaKnown RBP12.22□□□□□ -0.45
CCDC90B-202ENST00000455220 RBMY1EA6NEQ0 496 aaKnown RBP12.22□□□□□ -0.45
CCDC90B-202ENST00000455220 RBMY1DP0C7P1 496 aaKnown RBP12.22□□□□□ -0.45
CCDC90B-202ENST00000455220 CT45A10P0DMU9 189 aa12.22□□□□□ -0.45
CCDC90B-202ENST00000455220 RPL35P42766 123 aaKnown RBP12.22□□□□□ -0.45
CCDC90B-202ENST00000455220 ZNF138P52744 262 aa12.22□□□□□ -0.45
CCDC90B-202ENST00000455220 FLI1Q01543 452 aaPredicted RBP12.22□□□□□ -0.45
CCDC90B-202ENST00000455220 OR4B1Q8NGF8 309 aa12.22□□□□□ -0.45
CCDC90B-202ENST00000455220 FAM19A4Q96LR4 140 aa12.22□□□□□ -0.45
CCDC90B-202ENST00000455220 SGK494Q96LW2 274 aa12.22□□□□□ -0.45
CCDC90B-202ENST00000455220 TREM1Q9NP99 234 aa12.22□□□□□ -0.45
CCDC90B-202ENST00000455220 PSG8Q9UQ74 426 aa12.22□□□□□ -0.45
CCDC90B-202ENST00000455220 TRBV7-9A0A0J9YWB2 115 aa12.22□□□□□ -0.45
CCDC90B-202ENST00000455220 TAS2R60P59551 318 aa12.22□□□□□ -0.45
CCDC90B-202ENST00000455220 UBE2G1P62253 170 aa12.22□□□□□ -0.45
CCDC90B-202ENST00000455220 Q86TA4 180 aa12.22□□□□□ -0.45
CCDC90B-202ENST00000455220 Q8TAT8 98 aa12.22□□□□□ -0.45
CCDC90B-202ENST00000455220 PARLQ9H300 379 aa12.22□□□□□ -0.45
CCDC90B-202ENST00000455220 AURKAIP1Q9NWT8 199 aaPredicted RBP12.22□□□□□ -0.45
CCDC90B-202ENST00000455220 LENEPQ9Y5L5 61 aa12.22□□□□□ -0.45
CCDC90B-202ENST00000455220 A8MZ25 164 aa12.21□□□□□ -0.46
CCDC90B-202ENST00000455220 IGHV4-30-4P0DP06 118 aa12.21□□□□□ -0.46
CCDC90B-202ENST00000455220 LTAP01374 205 aa12.2□□□□□ -0.46
CCDC90B-202ENST00000455220 IGKV3-20P01619 116 aa12.2□□□□□ -0.46
CCDC90B-202ENST00000455220 CRISP2P16562 243 aa12.2□□□□□ -0.46
CCDC90B-202ENST00000455220 PRNTQ86SH4 94 aa12.2□□□□□ -0.46
CCDC90B-202ENST00000455220 TVP23CQ96ET8 276 aa12.2□□□□□ -0.46
CCDC90B-202ENST00000455220 IGF2BP2-AS1Q96M15 143 aa12.2□□□□□ -0.46
CCDC90B-202ENST00000455220 TRBV20OR9-2A0A075B6H5 130 aa12.19□□□□□ -0.46
CCDC90B-202ENST00000455220 NDUFA5Q16718 116 aa12.19□□□□□ -0.46
CCDC90B-202ENST00000455220 ZFP30Q9Y2G7 519 aa12.19□□□□□ -0.46
CCDC90B-202ENST00000455220 C9JCJ5 164 aa12.18□□□□□ -0.46
CCDC90B-202ENST00000455220 SFTA3P0C7M3 94 aa12.18□□□□□ -0.46
CCDC90B-202ENST00000455220 CEBPGP53567 150 aa12.18□□□□□ -0.46
CCDC90B-202ENST00000455220 LINC00322Q6ZN03 302 aaPredicted RBP12.18□□□□□ -0.46
CCDC90B-202ENST00000455220 TUBA4BQ9H853 241 aa12.18□□□□□ -0.46
CCDC90B-202ENST00000455220 K7EIL1 84 aa12.18□□□□□ -0.46
CCDC90B-202ENST00000455220 PRB2P02812 416 aaPredicted RBP12.18□□□□□ -0.46
CCDC90B-202ENST00000455220 ZNF674Q2M3X9 581 aa12.18□□□□□ -0.46
CCDC90B-202ENST00000455220 CENPWQ5EE01 88 aa12.18□□□□□ -0.46
CCDC90B-202ENST00000455220 SAPCD1Q5SSQ6 148 aa12.18□□□□□ -0.46
CCDC90B-202ENST00000455220 COX8CQ7Z4L0 72 aa12.18□□□□□ -0.46
CCDC90B-202ENST00000455220 ZFAND2AQ8N6M9 145 aa12.18□□□□□ -0.46
CCDC90B-202ENST00000455220 ASCL2Q99929 193 aa12.18□□□□□ -0.46
CCDC90B-202ENST00000455220 SMIM7Q9BQ49 75 aa12.18□□□□□ -0.46
CCDC90B-202ENST00000455220 NDFIP1Q9BT67 221 aa12.18□□□□□ -0.46
CCDC90B-202ENST00000455220 MLST8Q9BVC4 326 aa12.18□□□□□ -0.46
CCDC90B-202ENST00000455220 LOC102724200A0A096LPH7 203 aaPredicted RBP12.17□□□□□ -0.46
CCDC90B-202ENST00000455220 TMEM218A2RU14 115 aa12.17□□□□□ -0.46
CCDC90B-202ENST00000455220 KLLNB2CW77 178 aa12.17□□□□□ -0.46
CCDC90B-202ENST00000455220 RPL35AP18077 110 aaKnown RBP12.17□□□□□ -0.46
CCDC90B-202ENST00000455220 LEPP41159 167 aa12.17□□□□□ -0.46
CCDC90B-202ENST00000455220 CDKN1BP46527 198 aa12.17□□□□□ -0.46
CCDC90B-202ENST00000455220 NUTF2P61970 127 aaKnown RBP12.17□□□□□ -0.46
CCDC90B-202ENST00000455220 FAM74A3Q4VXF1 159 aa12.17□□□□□ -0.46
CCDC90B-202ENST00000455220 SOHLH1Q5JUK2 328 aa12.17□□□□□ -0.46
CCDC90B-202ENST00000455220 MORN3Q6PF18 240 aaPredicted RBP12.17□□□□□ -0.46
CCDC90B-202ENST00000455220 BAGE2Q86Y30 109 aa12.17□□□□□ -0.46
CCDC90B-202ENST00000455220 TMEM183AQ8IXX5 376 aa12.17□□□□□ -0.46
CCDC90B-202ENST00000455220 SMIM12Q96EX1 92 aa12.17□□□□□ -0.46
CCDC90B-202ENST00000455220 KIR2DL5BA0A0G2JN68 375 aa12.16□□□□□ -0.46
CCDC90B-202ENST00000455220 KIR2DL5BA0A0G2JPC4 375 aa12.16□□□□□ -0.46
CCDC90B-202ENST00000455220 ZNF727A8MUV8 499 aa12.16□□□□□ -0.46
CCDC90B-202ENST00000455220 IGLV2-8P01709 118 aa12.16□□□□□ -0.46
CCDC90B-202ENST00000455220 GIG44P09565 113 aaPredicted RBP12.16□□□□□ -0.46
CCDC90B-202ENST00000455220 TSPOP30536 169 aa12.16□□□□□ -0.46
CCDC90B-202ENST00000455220 GNG4P50150 75 aa12.16□□□□□ -0.46
CCDC90B-202ENST00000455220 SPINK13Q1W4C9 94 aa12.16□□□□□ -0.46
CCDC90B-202ENST00000455220 KIR2DL5AQ8N109 375 aa12.16□□□□□ -0.46
CCDC90B-202ENST00000455220 KIR2DL5BQ8NHK3 375 aa12.16□□□□□ -0.46
CCDC90B-202ENST00000455220 M0R2Z0 102 aa12.15□□□□□ -0.46
CCDC90B-202ENST00000455220 CRXO43186 299 aaPredicted RBP12.15□□□□□ -0.46
CCDC90B-202ENST00000455220 AMBPP02760 352 aa12.15□□□□□ -0.46
CCDC90B-202ENST00000455220 SLC7A5P1Q8MH63 180 aa12.15□□□□□ -0.46
CCDC90B-202ENST00000455220 C8orf49Q96NF6 230 aa12.15□□□□□ -0.46
CCDC90B-202ENST00000455220 LY96Q9Y6Y9 160 aa12.15□□□□□ -0.46
CCDC90B-202ENST00000455220 PRR9Q5T870 116 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms