RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 GSN-AS1Q9NRJ2 163 aa8.04□□□□□ -1.12
GARNL3-210ENST00000453030 DMBT1Q9UGM3 2413 aaPredicted RBP8.03□□□□□ -1.12
GARNL3-210ENST00000453030 UBE2L5PA0A1B0GUS4 154 aa8.03□□□□□ -1.12
GARNL3-210ENST00000453030 C7orf71A4D174 169 aa8.03□□□□□ -1.12
GARNL3-210ENST00000453030 FAM25EA8MYX2 175 aa8.03□□□□□ -1.12
GARNL3-210ENST00000453030 SSNA1O43805 119 aa8.03□□□□□ -1.12
GARNL3-210ENST00000453030 PRAF2O60831 178 aa8.03□□□□□ -1.12
GARNL3-210ENST00000453030 CST7O76096 145 aa8.03□□□□□ -1.12
GARNL3-210ENST00000453030 FUSP35637 526 aaKnown RBP eCLIP8.03□□□□□ -1.12
GARNL3-210ENST00000453030 CAV2P51636 162 aa8.03□□□□□ -1.12
GARNL3-210ENST00000453030 ERCC8Q13216 396 aa8.03□□□□□ -1.12
GARNL3-210ENST00000453030 RAB31Q13636 194 aa8.03□□□□□ -1.12
GARNL3-210ENST00000453030 GUK1Q16774 197 aa8.03□□□□□ -1.12
GARNL3-210ENST00000453030 Q6ZRG5 221 aa8.03□□□□□ -1.12
GARNL3-210ENST00000453030 C11orf72Q8NBR9 251 aa8.03□□□□□ -1.12
GARNL3-210ENST00000453030 ZNF680Q8NEM1 530 aa8.03□□□□□ -1.12
GARNL3-210ENST00000453030 OR1L4Q8NGR5 311 aa8.03□□□□□ -1.12
GARNL3-210ENST00000453030 GPN1Q9HCN4 374 aaPredicted RBP8.03□□□□□ -1.12
GARNL3-210ENST00000453030 DNAJC4Q9NNZ3 241 aa8.03□□□□□ -1.12
GARNL3-210ENST00000453030 FUT9Q9Y231 359 aa8.03□□□□□ -1.12
GARNL3-210ENST00000453030 SLC25A5P05141 298 aaKnown RBP8.02□□□□□ -1.13
GARNL3-210ENST00000453030 BAXQ07812 192 aa8.02□□□□□ -1.13
GARNL3-210ENST00000453030 CD300CQ08708 224 aa8.02□□□□□ -1.13
GARNL3-210ENST00000453030 Q6ZRN7 208 aaPredicted RBP8.02□□□□□ -1.13
GARNL3-210ENST00000453030 PFDN5Q99471 154 aa8.02□□□□□ -1.13
GARNL3-210ENST00000453030 UQCC1Q9NVA1 299 aa8.02□□□□□ -1.13
GARNL3-210ENST00000453030 TRBV19A0A075B6N1 114 aa8.01□□□□□ -1.13
GARNL3-210ENST00000453030 FAM24AA6NFZ4 105 aa8.01□□□□□ -1.13
GARNL3-210ENST00000453030 SIVA1O15304 175 aa8.01□□□□□ -1.13
GARNL3-210ENST00000453030 IGHV3-53P01767 116 aa8.01□□□□□ -1.13
GARNL3-210ENST00000453030 PYYP10082 97 aa8.01□□□□□ -1.13
GARNL3-210ENST00000453030 C12orf45Q8N5I9 185 aaPredicted RBP8.01□□□□□ -1.13
GARNL3-210ENST00000453030 EIF4E3Q8N5X7 224 aaKnown RBP8.01□□□□□ -1.13
GARNL3-210ENST00000453030 MRPL53Q96EL3 112 aaKnown RBP8.01□□□□□ -1.13
GARNL3-210ENST00000453030 MED28Q9H204 178 aa8.01□□□□□ -1.13
GARNL3-210ENST00000453030 WDR83OSQ9Y284 106 aa8.01□□□□□ -1.13
GARNL3-210ENST00000453030 KLF12Q9Y4X4 402 aa8.01□□□□□ -1.13
GARNL3-210ENST00000453030 VPS13BQ7Z7G8 4022 aa8□□□□□ -1.13
GARNL3-210ENST00000453030 IGKV2-40A0A087WW87 121 aaPredicted RBP8□□□□□ -1.13
GARNL3-210ENST00000453030 C5orf51A6NDU8 294 aa8□□□□□ -1.13
GARNL3-210ENST00000453030 KLLNB2CW77 178 aa8□□□□□ -1.13
GARNL3-210ENST00000453030 ZNF253O75346 499 aa8□□□□□ -1.13
GARNL3-210ENST00000453030 NXPH4O95158 308 aa8□□□□□ -1.13
GARNL3-210ENST00000453030 SIX6O95475 246 aa8□□□□□ -1.13
GARNL3-210ENST00000453030 IGKV2D-40P01614 121 aaPredicted RBP8□□□□□ -1.13
GARNL3-210ENST00000453030 RNASE4P34096 147 aaKnown RBP8□□□□□ -1.13
GARNL3-210ENST00000453030 S100A10P60903 97 aa8□□□□□ -1.13
GARNL3-210ENST00000453030 EXOC3-AS1Q8N2X6 119 aa8□□□□□ -1.13
GARNL3-210ENST00000453030 BLNKQ8WV28 456 aa8□□□□□ -1.13
GARNL3-210ENST00000453030 SLC39A9Q9NUM3 307 aa8□□□□□ -1.13
GARNL3-210ENST00000453030 MRPL16Q9NX20 251 aaKnown RBP8□□□□□ -1.13
GARNL3-210ENST00000453030 TIMM9Q9Y5J7 89 aa8□□□□□ -1.13
GARNL3-210ENST00000453030 ICOSQ9Y6W8 199 aa8□□□□□ -1.13
GARNL3-210ENST00000453030 MYCBP2O75592 4640 aa8□□□□□ -1.13
GARNL3-210ENST00000453030 EPM2AB3EWF7 344 aa7.99□□□□□ -1.13
GARNL3-210ENST00000453030 PAX4O43316 350 aa7.99□□□□□ -1.13
GARNL3-210ENST00000453030 SPINK4O60575 86 aa7.99□□□□□ -1.13
GARNL3-210ENST00000453030 ZNF324O75467 553 aaPredicted RBP7.99□□□□□ -1.13
GARNL3-210ENST00000453030 NDUFB4O95168 129 aa7.99□□□□□ -1.13
GARNL3-210ENST00000453030 FGF7P21781 194 aa7.99□□□□□ -1.13
GARNL3-210ENST00000453030 RPL29P47914 159 aaKnown RBP7.99□□□□□ -1.13
GARNL3-210ENST00000453030 TCL1AP56279 114 aa7.99□□□□□ -1.13
GARNL3-210ENST00000453030 ERVFC1-1P60608 527 aa7.99□□□□□ -1.13
GARNL3-210ENST00000453030 ANXA2RQ3ZCQ2 193 aa7.99□□□□□ -1.13
GARNL3-210ENST00000453030 GCSAMLQ5JQS6 135 aa7.99□□□□□ -1.13
GARNL3-210ENST00000453030 PRR9Q5T870 116 aa7.99□□□□□ -1.13
GARNL3-210ENST00000453030 C18orf15Q96N68 181 aa7.99□□□□□ -1.13
GARNL3-210ENST00000453030 AGPAT4-IT1Q9H0P7 198 aa7.99□□□□□ -1.13
GARNL3-210ENST00000453030 C11orf1Q9H5F2 150 aa7.99□□□□□ -1.13
GARNL3-210ENST00000453030 TP53TG3Q9ULZ0 132 aa7.99□□□□□ -1.13
GARNL3-210ENST00000453030 TNFRSF18Q9Y5U5 241 aa7.99□□□□□ -1.13
GARNL3-210ENST00000453030 IGSF23A1L1A6 192 aa7.98□□□□□ -1.13
GARNL3-210ENST00000453030 RGS13O14921 159 aa7.98□□□□□ -1.13
GARNL3-210ENST00000453030 EREGO14944 169 aa7.98□□□□□ -1.13
GARNL3-210ENST00000453030 PFDN1O60925 122 aa7.98□□□□□ -1.13
GARNL3-210ENST00000453030 MPDU1O75352 247 aa7.98□□□□□ -1.13
GARNL3-210ENST00000453030 GPX1P07203 203 aa7.98□□□□□ -1.13
GARNL3-210ENST00000453030 DNAH10OSP0CZ25 163 aa7.98□□□□□ -1.13
GARNL3-210ENST00000453030 PVALBP20472 110 aaPredicted RBP7.98□□□□□ -1.13
GARNL3-210ENST00000453030 VWC2Q2TAL6 325 aa7.98□□□□□ -1.13
GARNL3-210ENST00000453030 FAM122CQ6P4D5 195 aa7.98□□□□□ -1.13
GARNL3-210ENST00000453030 Q6ZQT7 251 aa7.98□□□□□ -1.13
GARNL3-210ENST00000453030 STX12Q86Y82 276 aa7.98□□□□□ -1.13
GARNL3-210ENST00000453030 CHAC2Q8WUX2 184 aa7.98□□□□□ -1.13
GARNL3-210ENST00000453030 ST6GAL2Q96JF0 529 aa7.98□□□□□ -1.13
GARNL3-210ENST00000453030 FAM19A4Q96LR4 140 aa7.98□□□□□ -1.13
GARNL3-210ENST00000453030 ARPC5LQ9BPX5 153 aa7.98□□□□□ -1.13
GARNL3-210ENST00000453030 LINC00467Q9BRT7 94 aa7.98□□□□□ -1.13
GARNL3-210ENST00000453030 AAMDCQ9H7C9 122 aa7.98□□□□□ -1.13
GARNL3-210ENST00000453030 TMEM14CQ9P0S9 112 aa7.98□□□□□ -1.13
GARNL3-210ENST00000453030 PRELID1Q9Y255 219 aa7.98□□□□□ -1.13
GARNL3-210ENST00000453030 FLG2Q5D862 2391 aaPredicted RBP7.97□□□□□ -1.13
GARNL3-210ENST00000453030 HIST1H1EP10412 219 aaKnown RBP7.97□□□□□ -1.13
GARNL3-210ENST00000453030 SULT1A1P50225 295 aa7.97□□□□□ -1.13
GARNL3-210ENST00000453030 HBG1P69891 147 aa7.97□□□□□ -1.13
GARNL3-210ENST00000453030 HBG2P69892 147 aa7.97□□□□□ -1.13
GARNL3-210ENST00000453030 PDE6HQ13956 83 aa7.97□□□□□ -1.13
GARNL3-210ENST00000453030 ICAM4Q14773 271 aa7.97□□□□□ -1.13
GARNL3-210ENST00000453030 IBA57Q5T440 356 aaKnown RBP7.97□□□□□ -1.13
GARNL3-210ENST00000453030 TMEM78Q5T7P6 136 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms