RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 SMIM7Q9BQ49 75 aa6.55□□□□□ -1.36
COL8A1-203ENST00000452013 PYGO2Q9BRQ0 406 aa6.55□□□□□ -1.36
COL8A1-203ENST00000452013 TP53TG1Q9Y2A0 90 aa6.55□□□□□ -1.36
COL8A1-203ENST00000452013 TRAV9-1A0A075B6T8 112 aa6.54□□□□□ -1.36
COL8A1-203ENST00000452013 A0A087X0K7 114 aa6.54□□□□□ -1.36
COL8A1-203ENST00000452013 A0A1B0GV50 99 aa6.54□□□□□ -1.36
COL8A1-203ENST00000452013 SOCS3O14543 225 aa6.54□□□□□ -1.36
COL8A1-203ENST00000452013 CDC34P49427 236 aaPredicted RBP6.54□□□□□ -1.36
COL8A1-203ENST00000452013 FAM3BP58499 235 aaPredicted RBP6.54□□□□□ -1.36
COL8A1-203ENST00000452013 FFAR4Q5NUL3 377 aa6.54□□□□□ -1.36
COL8A1-203ENST00000452013 FOXI2Q6ZQN5 318 aa6.54□□□□□ -1.36
COL8A1-203ENST00000452013 TRPT1Q86TN4 253 aaKnown RBP6.54□□□□□ -1.36
COL8A1-203ENST00000452013 CLEC5AQ9NY25 188 aa6.54□□□□□ -1.36
COL8A1-203ENST00000452013 LY96Q9Y6Y9 160 aa6.54□□□□□ -1.36
COL8A1-203ENST00000452013 TRAV5A0A0B4J249 113 aa6.53□□□□□ -1.36
COL8A1-203ENST00000452013 A0A1W2PPV4 95 aa6.53□□□□□ -1.36
COL8A1-203ENST00000452013 H3BMM0 161 aa6.53□□□□□ -1.36
COL8A1-203ENST00000452013 H7BYZ3 331 aa6.53□□□□□ -1.36
COL8A1-203ENST00000452013 DUSP14O95147 198 aaKnown RBP6.53□□□□□ -1.36
COL8A1-203ENST00000452013 CA1P00915 261 aaPredicted RBP6.53□□□□□ -1.36
COL8A1-203ENST00000452013 TYMSP04818 313 aa6.53□□□□□ -1.36
COL8A1-203ENST00000452013 CEBPGP53567 150 aa6.53□□□□□ -1.36
COL8A1-203ENST00000452013 RPL19P84098 196 aaKnown RBP6.53□□□□□ -1.36
COL8A1-203ENST00000452013 COA6Q5JTJ3 125 aaKnown RBP6.53□□□□□ -1.36
COL8A1-203ENST00000452013 FAM78BQ5VT40 261 aa6.53□□□□□ -1.36
COL8A1-203ENST00000452013 RNF183Q96D59 192 aa6.53□□□□□ -1.36
COL8A1-203ENST00000452013 OVOL2Q9BRP0 275 aa6.53□□□□□ -1.36
COL8A1-203ENST00000452013 SLC50A1Q9BRV3 221 aa6.53□□□□□ -1.36
COL8A1-203ENST00000452013 C1QTNF4Q9BXJ3 329 aa6.53□□□□□ -1.36
COL8A1-203ENST00000452013 MRPS12O15235 138 aaKnown RBP6.52□□□□□ -1.37
COL8A1-203ENST00000452013 CXorf1O96002 111 aa6.52□□□□□ -1.37
COL8A1-203ENST00000452013 PFN1P07737 140 aaKnown RBP6.52□□□□□ -1.37
COL8A1-203ENST00000452013 HLA-DRB4P13762 266 aa6.52□□□□□ -1.37
COL8A1-203ENST00000452013 PSG3Q16557 428 aa6.52□□□□□ -1.37
COL8A1-203ENST00000452013 IL17DQ8TAD2 202 aa6.52□□□□□ -1.37
COL8A1-203ENST00000452013 RAB24Q969Q5 203 aa6.52□□□□□ -1.37
COL8A1-203ENST00000452013 C17orf77Q96MU5 243 aa6.52□□□□□ -1.37
COL8A1-203ENST00000452013 CLUHP3Q96NS8 147 aa6.52□□□□□ -1.37
COL8A1-203ENST00000452013 MRPL32Q9BYC8 188 aaKnown RBP6.52□□□□□ -1.37
COL8A1-203ENST00000452013 RETNQ9HD89 108 aa6.52□□□□□ -1.37
COL8A1-203ENST00000452013 NIT2Q9NQR4 276 aa6.52□□□□□ -1.37
COL8A1-203ENST00000452013 TMEM14CQ9P0S9 112 aa6.52□□□□□ -1.37
COL8A1-203ENST00000452013 HLA-DRB4X5D2U9 266 aa6.52□□□□□ -1.37
COL8A1-203ENST00000452013 TRAV8-2A0A0B4J237 113 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 PCP4L1A6NKN8 68 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 HIST1H2BKO60814 126 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 HIST1H2BJP06899 126 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 CXCL1P09341 107 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 STAG3L2P0CL84 134 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 STAG3L3P0CL85 134 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 HIST1H1EP10412 219 aaKnown RBP6.51□□□□□ -1.37
COL8A1-203ENST00000452013 HIST1H2BOP23527 126 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 HIST1H2BBP33778 126 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 FGF8P55075 233 aaPredicted RBP6.51□□□□□ -1.37
COL8A1-203ENST00000452013 HIST1H2BDP58876 126 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 RHOBP62745 196 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 HIST1H2BCP62807 126 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 RPL23P62829 140 aaKnown RBP6.51□□□□□ -1.37
COL8A1-203ENST00000452013 ADIRFQ15847 76 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 HIST2H2BEQ16778 126 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 DEFB135Q30KP9 77 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 COX19Q49B96 90 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.51□□□□□ -1.37
COL8A1-203ENST00000452013 MORN5Q5VZ52 161 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 ZNF738Q8NE65 137 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 OR4B1Q8NGF8 309 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 HIST1H2BHQ93079 126 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 RPUSD4Q96CM3 377 aaKnown RBP6.51□□□□□ -1.37
COL8A1-203ENST00000452013 HIST1H2BNQ99877 126 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 HIST1H2BMQ99879 126 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 PARLQ9H300 379 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 FUT9Q9Y231 359 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 RFNGQ9Y644 331 aa6.51□□□□□ -1.37
COL8A1-203ENST00000452013 A0A0J9YX75 114 aa6.5□□□□□ -1.37
COL8A1-203ENST00000452013 C11orf94C9JXX5 98 aa6.5□□□□□ -1.37
COL8A1-203ENST00000452013 GATCO43716 136 aaKnown RBP6.5□□□□□ -1.37
COL8A1-203ENST00000452013 ZNF253O75346 499 aa6.5□□□□□ -1.37
COL8A1-203ENST00000452013 IGKV3-20P01619 116 aa6.5□□□□□ -1.37
COL8A1-203ENST00000452013 IGLC2P0DOY2 106 aa6.5□□□□□ -1.37
COL8A1-203ENST00000452013 NDUFA6P56556 154 aa6.5□□□□□ -1.37
COL8A1-203ENST00000452013 TAS2R45P59539 299 aa6.5□□□□□ -1.37
COL8A1-203ENST00000452013 PSG9Q00887 426 aa6.5□□□□□ -1.37
COL8A1-203ENST00000452013 GCSAMLQ5JQS6 135 aa6.5□□□□□ -1.37
COL8A1-203ENST00000452013 IGFL4Q6B9Z1 124 aa6.5□□□□□ -1.37
COL8A1-203ENST00000452013 MIR17HGQ75NE6 70 aa6.5□□□□□ -1.37
COL8A1-203ENST00000452013 TMEM183AQ8IXX5 376 aa6.5□□□□□ -1.37
COL8A1-203ENST00000452013 OR11H2Q8NH07 326 aa6.5□□□□□ -1.37
COL8A1-203ENST00000452013 C20orf173Q96LM9 149 aa6.5□□□□□ -1.37
COL8A1-203ENST00000452013 EDA2RQ9HAV5 297 aa6.5□□□□□ -1.37
COL8A1-203ENST00000452013 ZNF331Q9NQX6 463 aaPredicted RBP6.5□□□□□ -1.37
COL8A1-203ENST00000452013 GSN-AS1Q9NRJ2 163 aa6.5□□□□□ -1.37
COL8A1-203ENST00000452013 TMEM167BQ9NRX6 74 aa6.5□□□□□ -1.37
COL8A1-203ENST00000452013 PPP1R14DQ9NXH3 145 aa6.5□□□□□ -1.37
COL8A1-203ENST00000452013 PRKDCP78527 4128 aaKnown RBP6.49□□□□□ -1.37
COL8A1-203ENST00000452013 TRBV19A0A075B6N1 114 aa6.49□□□□□ -1.37
COL8A1-203ENST00000452013 TGIF2-C20orf24A0A0A6YYL0 155 aa6.49□□□□□ -1.37
COL8A1-203ENST00000452013 C9JCJ5 164 aa6.49□□□□□ -1.37
COL8A1-203ENST00000452013 F6UB75 175 aa6.49□□□□□ -1.37
COL8A1-203ENST00000452013 C3orf84H3BNL1 204 aa6.49□□□□□ -1.37
COL8A1-203ENST00000452013 AMBPP02760 352 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms