RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 TRPT1Q86TN4 253 aaKnown RBP12.66□□□□□ -0.38
LIME1-202ENST00000444951 ARL2-SNX15V9GYD0 113 aa12.66□□□□□ -0.38
LIME1-202ENST00000444951 LOC102723971A0A1B0GUV8 181 aa12.65□□□□□ -0.38
LIME1-202ENST00000444951 RBFOX3A6NFN3 312 aa12.65□□□□□ -0.38
LIME1-202ENST00000444951 PEX7O00628 323 aa12.65□□□□□ -0.38
LIME1-202ENST00000444951 TOR2AQ5JU69 321 aa12.65□□□□□ -0.38
LIME1-202ENST00000444951 TMEM78Q5T7P6 136 aa12.65□□□□□ -0.38
LIME1-202ENST00000444951 EIF5A2Q9GZV4 153 aaKnown RBP12.65□□□□□ -0.38
LIME1-202ENST00000444951 AGPAT4-IT1Q9H0P7 198 aa12.65□□□□□ -0.38
LIME1-202ENST00000444951 VAX2Q9UIW0 290 aa12.65□□□□□ -0.38
LIME1-202ENST00000444951 EPPK1P58107 5090 aaKnown RBP12.65□□□□□ -0.38
LIME1-202ENST00000444951 TRAV8-1A0A0A6YYK1 113 aa12.64□□□□□ -0.39
LIME1-202ENST00000444951 SCO2A0A1W2PP80 73 aa12.64□□□□□ -0.39
LIME1-202ENST00000444951 NPIPB6E9PJ23 425 aa12.64□□□□□ -0.39
LIME1-202ENST00000444951 MEF2BQ02080 365 aaPredicted RBP12.64□□□□□ -0.39
LIME1-202ENST00000444951 CCDC28AQ8IWP9 274 aa12.64□□□□□ -0.39
LIME1-202ENST00000444951 Q8TAT8 98 aa12.64□□□□□ -0.39
LIME1-202ENST00000444951 LINC00479Q96M42 142 aa12.64□□□□□ -0.39
LIME1-202ENST00000444951 RCHY1Q96PM5 261 aa12.64□□□□□ -0.39
LIME1-202ENST00000444951 ATG101Q9BSB4 218 aa12.64□□□□□ -0.39
LIME1-202ENST00000444951 SLC35B3Q9H1N7 401 aa12.64□□□□□ -0.39
LIME1-202ENST00000444951 AGRNO00468 2067 aa12.64□□□□□ -0.39
LIME1-202ENST00000444951 HYDINQ4G0P3 5121 aa12.64□□□□□ -0.39
LIME1-202ENST00000444951 TRAV34A0A0B4J273 112 aa12.63□□□□□ -0.39
LIME1-202ENST00000444951 F6UZH7 168 aa12.63□□□□□ -0.39
LIME1-202ENST00000444951 C3orf84H3BNL1 204 aa12.63□□□□□ -0.39
LIME1-202ENST00000444951 J3KRW8 73 aa12.63□□□□□ -0.39
LIME1-202ENST00000444951 K7EQM0 130 aa12.63□□□□□ -0.39
LIME1-202ENST00000444951 CT45A10P0DMU9 189 aa12.63□□□□□ -0.39
LIME1-202ENST00000444951 PMS2P11Q13670 270 aa12.63□□□□□ -0.39
LIME1-202ENST00000444951 CLLU1Q5K131 121 aa12.63□□□□□ -0.39
LIME1-202ENST00000444951 CYB561D1Q8N8Q1 229 aa12.63□□□□□ -0.39
LIME1-202ENST00000444951 M0R2Z0 102 aa12.62□□□□□ -0.39
LIME1-202ENST00000444951 CA1P00915 261 aaPredicted RBP12.62□□□□□ -0.39
LIME1-202ENST00000444951 AKR1C3P42330 323 aa12.62□□□□□ -0.39
LIME1-202ENST00000444951 SPINK13Q1W4C9 94 aa12.62□□□□□ -0.39
LIME1-202ENST00000444951 MUC7Q8TAX7 377 aa12.62□□□□□ -0.39
LIME1-202ENST00000444951 HIST1H2BAQ96A08 127 aa12.62□□□□□ -0.39
LIME1-202ENST00000444951 FAM210AQ96ND0 272 aa12.62□□□□□ -0.39
LIME1-202ENST00000444951 RBAKDNA6NC62 111 aa12.61□□□□□ -0.39
LIME1-202ENST00000444951 A8MZ25 164 aa12.61□□□□□ -0.39
LIME1-202ENST00000444951 TAGLN2P37802 199 aaKnown RBP12.61□□□□□ -0.39
LIME1-202ENST00000444951 ZNF138P52744 262 aa12.61□□□□□ -0.39
LIME1-202ENST00000444951 CEBPGP53567 150 aa12.61□□□□□ -0.39
LIME1-202ENST00000444951 APOC4P55056 127 aa12.61□□□□□ -0.39
LIME1-202ENST00000444951 NUTF2P61970 127 aaKnown RBP12.61□□□□□ -0.39
LIME1-202ENST00000444951 ZNF506Q5JVG8 444 aa12.61□□□□□ -0.39
LIME1-202ENST00000444951 CASC10Q5T4H9 136 aa12.61□□□□□ -0.39
LIME1-202ENST00000444951 AMTNQ6UX39 209 aa12.61□□□□□ -0.39
LIME1-202ENST00000444951 C9orf47Q6ZRZ4 202 aa12.61□□□□□ -0.39
LIME1-202ENST00000444951 PRNTQ86SH4 94 aa12.61□□□□□ -0.39
LIME1-202ENST00000444951 ARL6IP6Q8N6S5 226 aa12.61□□□□□ -0.39
LIME1-202ENST00000444951 LINC00477Q96M19 166 aa12.61□□□□□ -0.39
LIME1-202ENST00000444951 CSTL1Q9H114 145 aa12.61□□□□□ -0.39
LIME1-202ENST00000444951 XCL2Q9UBD3 114 aa12.61□□□□□ -0.39
LIME1-202ENST00000444951 SERTM2A0A1B0GWG4 89 aa12.6□□□□□ -0.39
LIME1-202ENST00000444951 RGS13O14921 159 aa12.6□□□□□ -0.39
LIME1-202ENST00000444951 UBE2G1P62253 170 aa12.6□□□□□ -0.39
LIME1-202ENST00000444951 MORN3Q6PF18 240 aaPredicted RBP12.6□□□□□ -0.39
LIME1-202ENST00000444951 LINC00322Q6ZN03 302 aaPredicted RBP12.6□□□□□ -0.39
LIME1-202ENST00000444951 TXNDC17Q9BRA2 123 aa12.6□□□□□ -0.39
LIME1-202ENST00000444951 TCEAL7Q9BRU2 100 aa12.6□□□□□ -0.39
LIME1-202ENST00000444951 PSG8Q9UQ74 426 aa12.6□□□□□ -0.39
LIME1-202ENST00000444951 BIRC6Q9NR09 4857 aa12.6□□□□□ -0.39
LIME1-202ENST00000444951 TRAV12-2A0A075B6T6 113 aa12.59□□□□□ -0.39
LIME1-202ENST00000444951 A8MTW9 85 aa12.59□□□□□ -0.39
LIME1-202ENST00000444951 PDE6DO43924 150 aa12.59□□□□□ -0.39
LIME1-202ENST00000444951 LEPP41159 167 aa12.59□□□□□ -0.39
LIME1-202ENST00000444951 FLI1Q01543 452 aaPredicted RBP12.59□□□□□ -0.39
LIME1-202ENST00000444951 MED9Q9NWA0 146 aa12.59□□□□□ -0.39
LIME1-202ENST00000444951 ZNF492Q9P255 531 aa12.59□□□□□ -0.39
LIME1-202ENST00000444951 PLECQ15149 4684 aaKnown RBP12.59□□□□□ -0.39
LIME1-202ENST00000444951 IGLV2-11P01706 119 aa12.58□□□□□ -0.4
LIME1-202ENST00000444951 SRSF3P84103 164 aaKnown RBP12.58□□□□□ -0.4
LIME1-202ENST00000444951 KIR3DS1Q14943 382 aa12.58□□□□□ -0.4
LIME1-202ENST00000444951 TMEM75Q8N9X5 138 aa12.58□□□□□ -0.4
LIME1-202ENST00000444951 CLUHP3Q96NS8 147 aa12.58□□□□□ -0.4
LIME1-202ENST00000444951 DERL1Q9BUN8 251 aa12.58□□□□□ -0.4
LIME1-202ENST00000444951 KIR2DL5BA0A0G2JN68 375 aa12.57□□□□□ -0.4
LIME1-202ENST00000444951 KIR2DL5BA0A0G2JPC4 375 aa12.57□□□□□ -0.4
LIME1-202ENST00000444951 GIG44P09565 113 aaPredicted RBP12.57□□□□□ -0.4
LIME1-202ENST00000444951 TSPOP30536 169 aa12.57□□□□□ -0.4
LIME1-202ENST00000444951 DEFB135Q30KP9 77 aa12.57□□□□□ -0.4
LIME1-202ENST00000444951 KIR2DL5AQ8N109 375 aa12.57□□□□□ -0.4
LIME1-202ENST00000444951 KIR2DL5BQ8NHK3 375 aa12.57□□□□□ -0.4
LIME1-202ENST00000444951 C2CD4CQ8TF44 421 aa12.57□□□□□ -0.4
LIME1-202ENST00000444951 NDFIP1Q9BT67 221 aa12.57□□□□□ -0.4
LIME1-202ENST00000444951 GPX1P07203 203 aa12.56□□□□□ -0.4
LIME1-202ENST00000444951 RNASE4P34096 147 aaKnown RBP12.56□□□□□ -0.4
LIME1-202ENST00000444951 CDKN1BP46527 198 aa12.56□□□□□ -0.4
LIME1-202ENST00000444951 PEA15Q15121 130 aa12.56□□□□□ -0.4
LIME1-202ENST00000444951 ZNF674Q2M3X9 581 aa12.56□□□□□ -0.4
LIME1-202ENST00000444951 Q86TA4 180 aa12.56□□□□□ -0.4
LIME1-202ENST00000444951 C11orf52Q96A22 123 aa12.56□□□□□ -0.4
LIME1-202ENST00000444951 TVP23CQ96ET8 276 aa12.56□□□□□ -0.4
LIME1-202ENST00000444951 FMC1Q96HJ9 113 aa12.56□□□□□ -0.4
LIME1-202ENST00000444951 C8orf49Q96NF6 230 aa12.56□□□□□ -0.4
LIME1-202ENST00000444951 TM2D3Q9BRN9 247 aa12.56□□□□□ -0.4
LIME1-202ENST00000444951 RETNQ9HD89 108 aa12.56□□□□□ -0.4
LIME1-202ENST00000444951 TREM1Q9NP99 234 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms